Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_M02
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0461 - 16165126-16165419,16165947-16166195,16168510-161686...    29   6.4  
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660...    29   6.4  

>04_03_0461 -
           16165126-16165419,16165947-16166195,16168510-16168645,
           16171251-16171469,16172738-16173116,16173660-16173918,
           16176052-16176315
          Length = 599

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -1

Query: 581 NQYQC*HHLYLVTLHSMLNLSCNLMSVLFPEKKNFFNYSNY 459
           NQ +C HH     +  +LNL+ + +   + +KK+ + +S Y
Sbjct: 545 NQVRCDHHQQFPVVQRLLNLAVS-VPFFYDKKKDAYTFSRY 584


>03_02_1023 + 13265179-13265330,13265526-13265637,13265752-13266048,
            13266361-13266623,13267637-13267847,13268420-13268590,
            13268671-13268748,13269275-13269520,13269763-13271868,
            13272122-13273904,13274113-13274216,13274752-13275108,
            13275210-13275328,13276175-13276436,13276669-13276893,
            13277075-13277214,13278087-13278159,13278431-13278532,
            13278647-13279018,13279183-13279230,13279516-13279900,
            13280440-13280558
          Length = 2574

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -1

Query: 545  TLHSMLNLSCNLMSVLFPEKKNFFNYSNYKDNK 447
            TL ++  +S   MSVLFPEKK+  + S+ K +K
Sbjct: 959  TLRAIKLISAAKMSVLFPEKKSSGSSSSSKKSK 991


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,208,953
Number of Sequences: 37544
Number of extensions: 260034
Number of successful extensions: 467
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)