Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_L24
(919 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16) 80 3e-15
SB_16303| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068) 69 7e-12
SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07) 54 2e-07
SB_51537| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 4e-07
SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26) 39 0.007
SB_31394| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080
SB_35463| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_43984| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_36475| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_14844| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10) 30 2.3
SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0) 30 3.0
SB_18553| Best HMM Match : fn3 (HMM E-Value=0.25) 29 5.3
SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_51144| Best HMM Match : Sugar_tr (HMM E-Value=0.13) 29 5.3
SB_42481| Best HMM Match : DUF1132 (HMM E-Value=2.5) 29 7.0
SB_36384| Best HMM Match : Keratin_B2 (HMM E-Value=2.3) 29 7.0
SB_9814| Best HMM Match : DUF413 (HMM E-Value=4.4) 29 7.0
SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058) 28 9.2
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_710| Best HMM Match : rve (HMM E-Value=0.003) 28 9.2
>SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16)
Length = 432
Score = 79.8 bits (188), Expect = 3e-15
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Frame = +3
Query: 405 PSKPENSMGI--RHLIIFLMFLGTTVSYATRVSMSVGIVAMTSNNSYDY--------PVF 554
P+ GI R++++ + +LG Y+ RV+++V IV M ++ + F
Sbjct: 102 PAAKTTKWGIPKRYVLLAMTWLGFINIYSMRVNLNVAIVGMVNDQTISKGRLHFIKKAEF 161
Query: 555 DWDRSTQDTILSSFFWGYVLLQVPAGMLAGRFGGKFLIFAAMACTGGRQPCLCLXPAVKG 734
+WD + Q +L SFF+GY +LQ+P LA R GG + + T L A +
Sbjct: 162 NWDSALQGLVLGSFFYGYWVLQIPGAWLAMRIGGTRVFGYGVFVTS--LLALLTPVATRY 219
Query: 735 DWIAVCACPIVMGLTQGLLYPSLHGILGRWAPANERXXLGTXVYAGAQLGXIIELMTSGM 914
+ I GL G+ +P H I +WAP ER L T AG G I+ + +G+
Sbjct: 220 SVWGLVGVRIFQGLFLGVTFPCNHAIWSKWAPPFERSTLITISIAGCPFGNIVAIPLTGL 279
Query: 915 L 917
L
Sbjct: 280 L 280
>SB_16303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 72.9 bits (171), Expect = 3e-13
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
Frame = +3
Query: 435 RHLIIFLMFLGTTVSYATRVSMSVGIVAMTSNNSYDYPVFDWDRSTQDTILSSFFWGYVL 614
+ + I MF+GT + Y+ R ++ + + AM+ + + WD+ ++S+FFWGY
Sbjct: 22 KRIWIASMFIGTMLLYSARSAIPLCMAAMSKDLA-------WDKEADGAVMSAFFWGYTP 74
Query: 615 LQVPAGMLAGRFGGKFLI-FAAMACTGGRQPCLCLXPAVKG-------DWIAVCACPIVM 770
Q+ G L+ ++GG+ ++ +AA+ + C P + G + V +V
Sbjct: 75 AQIVGGYLSDKYGGEVVLGYAAIIWSF----CTLAVPFLPGKAFLFFPPIVMVILSRVVT 130
Query: 771 GLTQGLLYPSLHGILGRWAPANERXXLGTXVYAGAQLGXII 893
GL+QGL YPSL I+ + P ER L + V++ +G ++
Sbjct: 131 GLSQGLHYPSLTNIIAKRIPLKERTLLTSSVFSAGPVGTLV 171
>SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068)
Length = 256
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Frame = +3
Query: 558 WDRSTQDTILSSFFWGYVLLQVPAGMLAGRFGG-KFLIFAAMACTGGRQPC-LCLXPAVK 731
W++ +LSSFFWGY++ Q+P G L+ +G + L++A C+ L V
Sbjct: 68 WNKRESGLVLSSFFWGYLITQIPGGFLSDVYGAERLLLWAVTGCSLSTLVIPLVASQKVT 127
Query: 732 GDWIAVCACPIVMGLTQGLLYPSLHGILGRWAPANERXXLGTXVYAGAQLGXII 893
V + +G+ QG+ YPSL+ +L + P +ER AG +G ++
Sbjct: 128 SPITLVLISRLALGVFQGIYYPSLYSLLAKSLPISERSSCSAFALAGGPVGSLV 181
>SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07)
Length = 349
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 26/101 (25%)
Frame = +3
Query: 435 RHLIIFLMFLGTTVSYATRVSMSVGIVAMTS----------------------NNSYDYP 548
R++++ + F G Y R ++SV +VAM + N++ D+
Sbjct: 34 RNVLVLMQFAGFVTVYGMRANLSVALVAMVNQTYANSASGTRVYVPECRLDGGNHTVDHT 93
Query: 549 V----FDWDRSTQDTILSSFFWGYVLLQVPAGMLAGRFGGK 659
+ F WD+ TQ +L +FF+GY++ Q+P G LAG +GGK
Sbjct: 94 LEDGPFKWDQDTQGLVLGAFFYGYLVTQLPGGWLAGHYGGK 134
>SB_51537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 52.8 bits (121), Expect = 4e-07
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 582 ILSSFFWGYVLLQVPAGMLAGRFGGKFLI-FAAMACTGGRQPCLCLXPAVKGDWIAVCAC 758
+L SF++GY +LQ+PAG + GGK + F + + L P VK +I
Sbjct: 3 VLGSFYYGYAVLQIPAGWAVLKIGGKPIFGFGILVAS---VLALVTPPIVKQSFIVFICL 59
Query: 759 PIVMGLTQGLLYPSLHGILGRWAPANERXXLGT 857
I GL+ GL+ + H I W+P ER L T
Sbjct: 60 RIAQGLSLGLIASAHHCIWATWSPIFERASLLT 92
>SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26)
Length = 473
Score = 38.7 bits (86), Expect = 0.007
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = +3
Query: 405 PSKPENSM-GIRHLIIFLMFLGTTVSYATRVSMSVGIVAMTSNNSY---DYPVFDWDR-- 566
PS + S+ R+++ L+F G YA RV+++V I AM + V
Sbjct: 3 PSMAQKSLIPKRYILACLIFWGFFTMYALRVNLNVAIGAMVKPHVVMVEGRAVIKVSVLV 62
Query: 567 STQDTILSSFFWGYVLLQVPAGMLAGRFGGKFLIFAAM 680
+ + +L SF++GYV LQ+ G LA + G L AA+
Sbjct: 63 AVEGVVLGSFYYGYVALQLLGGWLAIKIGATRLYGAAI 100
>SB_31394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 35.1 bits (77), Expect = 0.080
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 582 ILSSFFWGYVLLQVPAGMLAGRFGG 656
IL SF++GY++ Q+P G LA + GG
Sbjct: 3 ILGSFYYGYMVFQIPGGWLAMKLGG 27
>SB_35463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 34.3 bits (75), Expect = 0.14
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 600 WGYVLLQVPAGMLAGRFGGKFLIFAAMAC 686
WGY++L V AG L G F G ++F + C
Sbjct: 97 WGYIILNVAAGYLYGFFYGLVVVFVSATC 125
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = -2
Query: 642 RPACP----LGLAAARSPRKTKRESCLGCCGPSRTPD-NRSCCWRSWPQCQRSCS 493
+P+CP L + K+ +E C C S PD CC + C +SCS
Sbjct: 1321 KPSCPSECCLTVLTPLKENKSHQEGCPAVCSESCKPDCPIKCCSNALSSCPQSCS 1375
>SB_43984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 609 VLLQVPAGMLAGRFGGKFLIFAAM 680
+L QVP GMLA RFGG+ ++ + M
Sbjct: 1 MLTQVPGGMLAQRFGGRVVLGSCM 24
>SB_36475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 435 RHLIIFLMFLGTTVSYATRVSMSVGIVAMTSN 530
R+ I+FL L +SY R + + +VAM S+
Sbjct: 351 RYCIVFLTMLAFLLSYGVRAGIGIAVVAMVSS 382
>SB_14844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 435 RHLIIFLMFLGTTVSYATRVSMSVGIVAMTSN 530
R+ I FL L +SY R +S+ +VAM S+
Sbjct: 108 RYCIAFLTMLAFLLSYGVRAGISIAVVAMVSS 139
>SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10)
Length = 265
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 456 MFLGTTVSYATRVSMSVGIVAMTSNNSYDYPVFDWDRSTQDTILSSFFWGYVLLQVPAGM 635
+FL + S + S GI + S D D R + +FWG + + +
Sbjct: 125 IFLAKSKSLESNRPDSHGISKEEKSKSLDSQTRDLSRGFMNLSEQGWFWGAMRYEDAEQV 184
Query: 636 LAGRFGGKFLI 668
LAGR G FL+
Sbjct: 185 LAGRPDGSFLV 195
>SB_20844| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 2675
Score = 29.9 bits (64), Expect = 3.0
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 15/94 (15%)
Frame = -2
Query: 702 VDDPRCTP-WLRRSGTFLRSVRPACPLGLAAARS---PR-----KTKRESCLGCCGPSRT 550
+ D +CT + SGT L ++ CP+ A S P+ T+ C+ S+
Sbjct: 318 IPDDKCTGVGAKPSGTRLCTLTRYCPVWATGAWSTCYPKCGRGISTRMVYCVSVTDESQK 377
Query: 549 -PD---NRSCCWRSWPQC--QRSCSPSWHKTRWS 466
PD N S ++ QC R C P WH ++WS
Sbjct: 378 YPDTLCNNSTRPQNQKQCVSDRVCPPMWHASQWS 411
>SB_18553| Best HMM Match : fn3 (HMM E-Value=0.25)
Length = 1702
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +2
Query: 575 RHDSLFVFLGLRAAASPSGHAGRTLRRKVPDLRSHGVHRGSSTLFMPLXRS*GRLDSGVR 754
R FVFL R S G LRR + G R + T+ + S S V
Sbjct: 1632 RQSYQFVFLLARPVFSSFSPTGSALRRSRRESTGDGSFRANFTVVLREISSQPLAFSNVN 1691
Query: 755 VSHRDGLD 778
+SH+ G+D
Sbjct: 1692 ISHQFGVD 1699
>SB_57031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1495
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 585 ESCLGCCGPSRTPDNRSCCWRSWPQCQRSCSPSWHKTR 472
++C C PS D W W +C SC+ ++TR
Sbjct: 133 QACNVTCCPSLDYDEIFTSWSVWGECNASCTGYKNRTR 170
>SB_51144| Best HMM Match : Sugar_tr (HMM E-Value=0.13)
Length = 371
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 588 SSFFWGYVLLQVPAGMLAGRFGGKFLIFAAMAC 686
S F+G+ L + GM+A ++G + ++F + AC
Sbjct: 124 SMLFFGWALGAIILGMIADKYGRRSVLFPSAAC 156
>SB_42481| Best HMM Match : DUF1132 (HMM E-Value=2.5)
Length = 225
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 591 SFFWGYVLLQVPAGMLAGRFGGKFLIFAAMA 683
+ F G + + G L+ RFG K IFA+MA
Sbjct: 193 TMFVGMLFTSIVVGPLSDRFGRKICIFASMA 223
>SB_36384| Best HMM Match : Keratin_B2 (HMM E-Value=2.3)
Length = 199
Score = 28.7 bits (61), Expect = 7.0
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = -2
Query: 684 TPWLRRSGTFLRSVRPA-CPLGLAAARSPRKTKRE-SCLGCCGPSRTPDNRSCCWRSWPQ 511
T W+ R L V P +G+ + +R+ CLG G + CC W
Sbjct: 50 TDWVIRMPGILVIVLPINARVGIPCKSVVQHIRRKYRCLGPSGSLQPSVKALCCHTDWGH 109
Query: 510 CQRSCSPSWHKTR 472
Q +C+P H T+
Sbjct: 110 TQSTCAP--HPTK 120
>SB_9814| Best HMM Match : DUF413 (HMM E-Value=4.4)
Length = 422
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = -2
Query: 582 SCLGCCGPSRTPDNRSCCWRSWPQCQRSCSPSWHKTRW 469
+CL C T D CCWR+ C T+W
Sbjct: 171 ACLHHCQKHETVDVEGCCWRNMFSCVNLVRILQKLTKW 208
>SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 9.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 687 TGGRQPCLCLXPAVKGDW 740
+GGRQP +CL P + W
Sbjct: 116 SGGRQPSICLEPTTRPKW 133
>SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058)
Length = 1299
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Frame = -1
Query: 772 PITMGHAHTAIQSPLTAG*RHKQG*RPPVHA---MAAKIRNFPPKRPASMPAGTCSST*P 602
P+ HT++ + A +PP+H N P PA+ P S P
Sbjct: 771 PVITRQPHTSVIAARKAA-ESSSAQQPPLHPDLLETTTATNVTPSLPATKPTKVAPSPEP 829
Query: 601 QKNEERIVSW 572
++ E +I +W
Sbjct: 830 KRREIKITAW 839
>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 320 LRTVFAYIVTVQFI*LFFCYTFEFLYVTFIVSSNIQLVG-ALNVFY 186
+R +F + + LF CY E+ + F+ +N LVG ++VF+
Sbjct: 1 MRPLFVLVFANVLLLLFRCYNSEYQVINFMGINNTALVGYIIDVFH 46
>SB_710| Best HMM Match : rve (HMM E-Value=0.003)
Length = 538
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -2
Query: 675 LRRSGTFLRSVRPACPLGLAAARSPRKTKRESCLGC 568
LRR+ LRSV PA P A A RK KR C
Sbjct: 199 LRRNRLHLRSVPPATPNSNADANYKRKDKRVGHARC 234
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,897,526
Number of Sequences: 59808
Number of extensions: 681775
Number of successful extensions: 2024
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2016
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2657535823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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