Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_L24
         (919 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    25   0.96 
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    25   1.3  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   3.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   5.1  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   9.0  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   9.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   9.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   9.0  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   9.0  

>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 25.0 bits (52), Expect = 0.96
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -2

Query: 831 PVPSVPGCRADSGKAGPASSPSRWDTRTPLSSRP*LRXKGINK-VDDPR 688
           P+PS+P   AD    GPAS     +  +P   +P +R   I K +DD R
Sbjct: 474 PLPSLPLPGADDDLFGPASPAYVHEDVSPTFEKPLVRE--IEKTIDDAR 520


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 510 IVAMTSNNSYDYPVFDWDRSTQD 578
           + A     SYDYP  +WD  T +
Sbjct: 120 LYAQIKTGSYDYPSPEWDTVTPE 142


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 145 LEAVSVGSDRRARDLPVTPPSTPRL 71
           LEAV++GS  R    P T  + P+L
Sbjct: 433 LEAVNLGSACRIHGSPATTAAPPQL 457


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +2

Query: 74  SWSGRRSHRQVARAPVTSYRYSLQPHHNHIGNKHFI 181
           SW  +   R+ +R       Y L  HH H  N H I
Sbjct: 254 SWHQKELVRRDSRRKNYGGVYHLDNHHVHHANHHAI 289


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 231 YKCYIQKFESVTKK*LNKLYCNNISEYCTKFE 326
           Y C     ++++   + K+Y N I   C K E
Sbjct: 96  YDCLKNSADTISSYFVGKMYFNLIDTKCYKLE 127


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 231 YKCYIQKFESVTKK*LNKLYCNNISEYCTKFE 326
           Y C     ++++   + K+Y N I   C K E
Sbjct: 101 YDCLKNSADTISSYFVGKMYFNLIDTKCYKLE 132


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -2

Query: 561 PSRTPDNRSCCWRSWPQC 508
           P R P     CWR   QC
Sbjct: 821 PERLPSFDDECWRLMEQC 838


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -2

Query: 561 PSRTPDNRSCCWRSWPQC 508
           P R P     CWR   QC
Sbjct: 859 PERLPSFDDECWRLMEQC 876


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 231 YKCYIQKFESVTKK*LNKLYCNNISEYCTKFE 326
           Y C     ++++   + K+Y N I   C K E
Sbjct: 101 YDCLKNSADTISSYFVGKMYFNLIDTKCYKLE 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,621
Number of Sequences: 438
Number of extensions: 6460
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)