Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_L21
         (978 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   1.2  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    24   1.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    24   1.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.6  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    24   1.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    24   1.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   2.1  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   6.3  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 437 TKIEINNTTSFYPPSPXELKPSPAELANDLLQQ 535
           T +  + TTS  P     + P PA LA+ L+Q+
Sbjct: 70  TPLPSDGTTSPEPDPEIPVAPEPAPLASPLVQE 102


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 290 IITTMSASQKESWAAAIDLLTNDECRLLLEVEDFFNDDCDLLIN 421
           IIT M+ +Q  +W A        E ++  E ++  +DD D L++
Sbjct: 122 IITKMTLTQVSTWFANARRRLKKENKMTWEPKNKTDDDDDALVS 165


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 233 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 367
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 9   HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 52


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 233 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 367
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 68  HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 111


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 233 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 367
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 9   HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 52


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 233 HQHH*TSIPLDFYSHSWN*IITTMSASQKESWAAAIDLLTNDECR 367
           H HH  +    F + +   ++ + S++   + AAA+D  T+  CR
Sbjct: 68  HHHH-QAAAAAFGAAASGSMVPSFSSTASSALAAAVDAATDKSCR 111


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
 Frame = +2

Query: 302 MSASQKESWAAAIDL-LTNDECRLLLEVEDFFNDDCDLLINFPSAATKIEINNTTSFYPP 478
           M  S+   W   + + LTN E  ++        D   +  NF     KI + N T  +  
Sbjct: 70  MLCSEPAIWPKPVHIKLTNRESSII--------DKTKISFNFSQGPVKIMLQNATDLFIK 121

Query: 479 SPXELKP 499
           S   LKP
Sbjct: 122 SLESLKP 128


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 944 APPPSFXXPW 915
           +PPPS+  PW
Sbjct: 28  SPPPSYCDPW 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,352
Number of Sequences: 336
Number of extensions: 3063
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27720044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)