Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_L19
         (1036 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1316 - 32590967-32591548,32592042-32592262,32592494-32592869     33   0.49 
12_01_0226 + 1715211-1716761                                           32   0.86 
09_06_0073 + 20687057-20687246,20689004-20689203,20689786-206899...    32   0.86 
02_04_0437 - 22938263-22938273,22938345-22938444,22938727-229389...    31   2.0  
11_01_0228 + 1768318-1769871                                           30   3.5  
03_05_0541 + 25381403-25382077,25382555-25383904,25386267-253864...    29   4.6  
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150...    29   4.6  

>04_04_1316 - 32590967-32591548,32592042-32592262,32592494-32592869
          Length = 392

 Score = 32.7 bits (71), Expect = 0.49
 Identities = 22/76 (28%), Positives = 38/76 (50%)
 Frame = -3

Query: 248 NPNTGIHCFSRFQSL*CFSKNDALLY*NKELRMTLTKYFEKVYSENLQIKYKFNDSKTKN 69
           NP TG+H F+R      F  N      N+E  +   +Y +++Y+E+  ++ +     + N
Sbjct: 101 NPKTGLHYFTRI-----FFINPLTFDLNEESPLGPMRYTDRIYNEHEALRMR----NSVN 151

Query: 68  IFSQTLNSKS*GFPID 21
           I S  + S   GFPI+
Sbjct: 152 ILSVKILSSDVGFPIN 167


>12_01_0226 + 1715211-1716761
          Length = 516

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +3

Query: 252 QDLDKAITKFTNLNEHTDEVLQDII 326
           QD D  +++F   +EH+DEVL+DI+
Sbjct: 280 QDRDDVLSRFVASDEHSDEVLRDIV 304


>09_06_0073 +
           20687057-20687246,20689004-20689203,20689786-20689926,
           20689995-20690075,20690564-20690688,20690763-20690807,
           20691853-20691877,20692282-20693073
          Length = 532

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +3

Query: 252 QDLDKAITKFTNLNEHTDEVLQDII 326
           QD D  +++F   +EH+DEVL+DI+
Sbjct: 367 QDRDDVLSRFVASDEHSDEVLRDIV 391


>02_04_0437 -
           22938263-22938273,22938345-22938444,22938727-22938908,
           22938989-22939092,22939792-22939857,22940032-22940105,
           22940241-22940309,22940902-22941028,22941740-22942971,
           22943163-22943486,22943500-22943793
          Length = 860

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 363 QPPNTPLTPEQAQVVSELASTIKQNAFQLSTDHXELHAT 479
           QP    L+PE+  +VS   STI++N F L+ D   LHA+
Sbjct: 707 QPLRLDLSPEEEVIVSMNMSTIRKNGFVLAED---LHAS 742


>11_01_0228 + 1768318-1769871
          Length = 517

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 255 DLDKAITKFTNLNEHTDEVLQDII 326
           D D  +++F   +EH+DEVL+DI+
Sbjct: 282 DRDDVLSRFVASDEHSDEVLRDIV 305


>03_05_0541 +
           25381403-25382077,25382555-25383904,25386267-25386402,
           25386642-25387126
          Length = 881

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +3

Query: 306 EVLQDIINKVEELRREIAQQPPNTPLT--PEQAQVVSELASTIKQNAF 443
           + LQ+  NKV   +R I Q  PN PL   P  AQ+ +E    + + +F
Sbjct: 511 QALQEAANKVNMAKRGIGQVAPNAPLAVMPIAAQLPAEGFRNVPEISF 558


>01_05_0564 +
           23312419-23312987,23314652-23314751,23314832-23315055,
           23315212-23316041,23316161-23316275,23316786-23316905,
           23317410-23317450,23317546-23317595,23317684-23317719,
           23317836-23317856
          Length = 701

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 357 AQQPPNTPLTPEQAQVVSELAST 425
           A++PP  PLTPE+A+  +E A +
Sbjct: 18  AEKPPAAPLTPEEAEAEAETAGS 40


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,268,095
Number of Sequences: 37544
Number of extensions: 407151
Number of successful extensions: 1050
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3047748156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)