Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_L19
(1036 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-19|CAB11556.2| 259|Caenorhabditis elegans Hypothetical p... 34 0.19
AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical ... 30 2.4
Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical pr... 29 5.4
AL032627-16|CAD56606.1| 301|Caenorhabditis elegans Hypothetical... 29 5.4
AL032627-15|CAB63358.1| 278|Caenorhabditis elegans Hypothetical... 29 5.4
AL117195-6|CAB55013.2| 503|Caenorhabditis elegans Hypothetical ... 29 7.2
AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical ... 29 7.2
AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical ... 29 7.2
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 28 9.5
U00067-7|AAK20078.1| 262|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z98866-19|CAB11556.2| 259|Caenorhabditis elegans Hypothetical
protein Y49E10.22 protein.
Length = 259
Score = 33.9 bits (74), Expect = 0.19
Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Frame = +3
Query: 27 RESLRFRVES-LRENVFSLAIIKFVFYLQIFRVYLFKIFGKSHT*FFVLIQ*GVVF*KTL 203
R+S VES + E+ + +I+ +FYL+ R + F+ K H +Q G++F K
Sbjct: 53 RKSFECHVESCISESTSKIYVIEDIFYLKSMR-HPFQKIAKRHG-----LQFGIIFLKV- 105
Query: 204 *GL-ES*KTMDSCIGVEQDLDKAITKFTNLNEHTDEVLQD-IINKVEELRREI 356
G+ E+ + G+E+ ++ I K E DE+L++ I+ + +E+ ++
Sbjct: 106 -GIVEALRRNSHRTGIEKQKNETIRKIFEKMEDPDEILENSIVLETDEVEIDV 157
>AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical
protein M151.1 protein.
Length = 402
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/43 (25%), Positives = 27/43 (62%)
Frame = +3
Query: 237 CIGVEQDLDKAITKFTNLNEHTDEVLQDIINKVEELRREIAQQ 365
C+ +EQ+++K ++L D+ ++ I+N+ +LR ++ Q+
Sbjct: 212 CLQLEQEMEKLSNNISSLTVEKDKEIKLIVNENRQLRSQLKQK 254
>Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical
protein F11F1.2 protein.
Length = 249
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +3
Query: 240 IGVEQDLDKAITKFTNLNEHTDEVLQDIINKVEELRREIAQQPPNTP-LTPEQAQVVSE- 413
+GVE+ L K L + + ++ ++N +E+L +E+A + P + E +++V +
Sbjct: 139 LGVEEVLSKLNGLVPGLGDELENLITTVLNLIEQLLKEVADILQSLPDVLGELSKIVDDQ 198
Query: 414 -LASTIKQNAF-QL-STDHXELH 473
L S K +A QL T+ EL+
Sbjct: 199 NLTSVEKNDAINQLKGTNKIELN 221
>AL032627-16|CAD56606.1| 301|Caenorhabditis elegans Hypothetical
protein Y41C4A.12b protein.
Length = 301
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = +3
Query: 252 QDLDKAITKFTNLNEHTDE------VLQDIINKVEELRREIAQQPPNTP--LTPEQAQVV 407
Q++ + + + ++EH ++ V Q+I+ K+ +R+E+ + TP LTP +
Sbjct: 5 QEIQQNLERLAEMDEHLEQCEEWNVVAQEIVQKLSTIRKEVERSAAPTPLLLTPPGSCGS 64
Query: 408 SELASTIKQNAFQLSTDHXELH 473
+ S I + T+ E +
Sbjct: 65 GSIYSDISSEMTNVYTEAVEAY 86
>AL032627-15|CAB63358.1| 278|Caenorhabditis elegans Hypothetical
protein Y41C4A.12a protein.
Length = 278
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = +3
Query: 252 QDLDKAITKFTNLNEHTDE------VLQDIINKVEELRREIAQQPPNTP--LTPEQAQVV 407
Q++ + + + ++EH ++ V Q+I+ K+ +R+E+ + TP LTP +
Sbjct: 5 QEIQQNLERLAEMDEHLEQCEEWNVVAQEIVQKLSTIRKEVERSAAPTPLLLTPPGSCGS 64
Query: 408 SELASTIKQNAFQLSTDHXELH 473
+ S I + T+ E +
Sbjct: 65 GSIYSDISSEMTNVYTEAVEAY 86
>AL117195-6|CAB55013.2| 503|Caenorhabditis elegans Hypothetical
protein Y57A10A.8 protein.
Length = 503
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = -1
Query: 307 SSVCSFKFVNFVIALSKSCSTPIQESIVFQDSSPYSVFQKTTPYCIRTKNYV*LLPNI 134
S+ + KF+NF++ +K+ P+ ++++ S F +P RT+ ++ ++P I
Sbjct: 141 SAAFAEKFMNFLVEKTKNVVEPVSVGGIYEEFSQIDGF-GLSPAAYRTRFHINIVPEI 197
>AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical
protein Y51A2D.12 protein.
Length = 334
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 311 YFIGMFI*ICKFCNCFV*ILLNPNTGIH-CFSRFQS 207
+ +G F+ +C + N FV + + NTG+ FS F S
Sbjct: 45 FCVGFFMNLCTYLNSFVTLRIPQNTGVQGTFSSFYS 80
>AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical
protein F33E11.3 protein.
Length = 651
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 312 LQDIINKVEELRREIAQQPPNTPLTPEQAQV-VSELAS---TIKQNAFQLSTDHXELH 473
L+D + K+EE + E+ P P + E+A++ V+E A + N F L E++
Sbjct: 184 LEDELEKIEEKKEELVISSPEPPESQEEARIMVAEAARGTFSALTNVFNLLQQRCEIY 241
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/66 (22%), Positives = 20/66 (30%)
Frame = +2
Query: 611 PNXXXPXWLPVPXALIXXRSGSXXSPLPPKXGTLXSGPFXAGNPXXRSWXXXXHPXXFCP 790
P P P P + + S P+P + PF A P + P
Sbjct: 126 PAVSRPPAFPTPPPSVGSAAPSIQPPIPSALASARPAPFPAAQPPPAPTPTPSYQQQMAP 185
Query: 791 XPXRPA 808
P PA
Sbjct: 186 RPQAPA 191
>U00067-7|AAK20078.1| 262|Caenorhabditis elegans Hypothetical
protein F54E7.8 protein.
Length = 262
Score = 28.3 bits (60), Expect = 9.5
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 261 DKAITKFTNLNEHTDEVLQDIINKVEELRREIAQQPPNTP-LTPEQAQVVSELA 419
DKAI + NEH D +N V E +I P P ++ EQ V+ E A
Sbjct: 91 DKAIVETKERNEHLRIGSIDFLNPVVEKVEKIVFAKPEMPQISVEQGSVLGESA 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,715,355
Number of Sequences: 27780
Number of extensions: 347366
Number of successful extensions: 1024
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2741106356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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