Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_L19
         (1036 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g46240.1 68415.m05750 IQ domain-containing protein / BAG doma...    33   0.31 
At3g49490.1 68416.m05409 expressed protein                             31   1.2  
At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1) domain...    31   1.6  
At1g34260.1 68414.m04252 phosphatidylinositol-4-phosphate 5-kina...    30   2.2  
At5g06410.1 68418.m00717 DNAJ heat shock N-terminal domain-conta...    29   3.8  
At5g52790.1 68418.m06551 CBS domain-containing protein-related c...    29   6.7  
At2g03600.1 68415.m00320 hypothetical protein similar to SP|Q417...    29   6.7  
At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative ...    28   8.8  
At4g14760.1 68417.m02271 M protein repeat-containing protein con...    28   8.8  

>At2g46240.1 68415.m05750 IQ domain-containing protein / BAG
            domain-containing protein contains Pfam profiles PF00612:
            IQ calmodulin-binding motif, PF02179: BAG (Apoptosis
            regulator Bcl-2 protein) domain
          Length = 1043

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 19/78 (24%), Positives = 36/78 (46%)
 Frame = +3

Query: 282  TNLNEHTDEVLQDIINKVEELRREIAQQPPNTPLTPEQAQVVSELASTIKQNAFQLSTDH 461
            TN+ E+   V++ +   + EL + + +   N+   PE A  VSE  +   +N  +   D 
Sbjct: 802  TNVEENKAMVVESLEEPINELPQMVEETETNSIRDPENASEVSEAETNSSENENRKGEDD 861

Query: 462  XELHATXSRSGXGLYIGI 515
              LH+  +     L +G+
Sbjct: 862  IVLHSEKNVELSELPVGV 879


>At3g49490.1 68416.m05409 expressed protein
          Length = 953

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 116 QSIPFQNIW*ESYVVLCSNTIRRRF--LKNTIGTGILKN 226
           Q++ ++N+W E+   LCS T   R+  +KN IG   L N
Sbjct: 635 QTLLYKNLWLETEAALCSTTCMARYHRIKNEIGNLKLNN 673


>At5g20360.1 68418.m02422 octicosapeptide/Phox/Bem1p (PB1)
           domain-containing protein / tetratricopeptide repeat
           (TPR)-containing protein contains Pfam profiles PF00564:
           PB1 domain, PF00515: TPR Domain
          Length = 809

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 222 KTMDSCIGVEQDLDKAITKFTNLNEHTD--EVLQDIINKVEEL 344
           +T+D C+   + LD  ++K  NL++     E L D + KVE L
Sbjct: 67  ETLDDCVSKVKTLDDCVSKVENLDDCVPKVETLDDCVPKVETL 109



 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +3

Query: 222 KTMDSCIGVEQDLDKAITKFTNLNEHTD--EVLQDIINKVEEL 344
           +T+D C+   + LD  ++K   L++     E L D ++KVE L
Sbjct: 27  ETLDDCVSKVETLDDCVSKVETLDDCVSKAETLADCVSKVETL 69


>At1g34260.1 68414.m04252 phosphatidylinositol-4-phosphate 5-kinase
           family protein low similarity to SP|Q9Z1T6 FYVE
           finger-containing phosphoinositide kinase (EC 2.7.1.68)
           (1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
           (PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
           profile PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase
          Length = 1456

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -3

Query: 128 KVYSENLQIKYKFNDSKTKNIFSQTLNSKS*GFPIDKS 15
           KVY EN ++  +  DSK K I SQ +  KS GF I++S
Sbjct: 143 KVYEENRRVMLEEADSKFKFIVSQLI--KSAGFSIEES 178


>At5g06410.1 68418.m00717 DNAJ heat shock N-terminal
           domain-containing protein similar to SP|P36540 Chaperone
           protein hscB (HSC20) {Escherichia coli O157:H7};
           contains Pfam profile PF00226 DnaJ domain
          Length = 252

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
 Frame = +3

Query: 213 ES*KTMDSCIGVEQDLDKA--ITKFTNLNEHTDEVLQD--IINKVEELRREIAQQPPNTP 380
           +S K  ++C  + + L +A  I K   +N + +E + D  ++ ++ ELR  I++   +T 
Sbjct: 141 QSAKVTEACRTLTKRLSRAMYIMKLNGVNVNEEETITDPTLLMEIMELREAISEADDSTS 200

Query: 381 LTPEQAQVVSEL 416
           L   ++QV  +L
Sbjct: 201 LNQIRSQVQEKL 212


>At5g52790.1 68418.m06551 CBS domain-containing protein-related
           contains Pfam profile PF01595: Domain of unknown
           function, weak hit to PF00571: CBS domain
          Length = 500

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = +3

Query: 228 MDSCIGVEQDLDKAITKFTNLNEHTDEVLQDIINKVEELRREIAQQPPNTPLTPEQAQVV 407
           +DS    ++++   IT    + E   E + D  ++  EL + I    P +  +PE A   
Sbjct: 355 IDSISDEDEEVIGIITLEDVMEELIQEEIYDETDQYVELHKRITINMPMSGNSPETATWA 414

Query: 408 SELASTI 428
           SELAS I
Sbjct: 415 SELASPI 421


>At2g03600.1 68415.m00320 hypothetical protein similar to SP|Q41706
           A3 protein (unknown function) {Vigna unguiculata}
          Length = 344

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 188 FLKNTIGTGILKNNGFLYWG*AGFRQSNYKIY 283
           F  ++ G G++ N  FLYW   G  +S++K Y
Sbjct: 240 FSISSFGVGLILNIIFLYWPILGLPRSSFKAY 271


>At5g28300.1 68418.m03436 trihelix DNA-binding protein, putative
           similar to GT-2 factor [Arabidopsis thaliana GI:416490
          Length = 619

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 336 EELRREIAQQPPNTPLTPEQAQVVSELASTIKQNAFQLSTDHXELH 473
           E++ R IA  PP  PL P Q      L   +  ++F  +T+H   H
Sbjct: 8   EQIHRFIASPPPPPPLPPHQPAAERSLPFPVSFSSF--NTNHQPQH 51


>At4g14760.1 68417.m02271 M protein repeat-containing protein
           contains Pfam profile: PF02370 M protein repeat
          Length = 1676

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +3

Query: 228 MDSCIGVEQDLDKAITKFTNLNEHTDEVLQDIINKVEELRREIAQQPPNTPLTPEQAQVV 407
           MDS +    DL+K + +     + + E  +D+I + E LR E       + L  E+A +V
Sbjct: 576 MDSILKRNADLEKLLLESNTKLDGSREKAKDLIERCESLRGE------KSELAAERANLV 629

Query: 408 SEL 416
           S+L
Sbjct: 630 SQL 632


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,664,216
Number of Sequences: 28952
Number of extensions: 324870
Number of successful extensions: 815
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2540481952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)