BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fdpeP01_F_L17 (975 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 36 0.050 SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 35 0.087 SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) 35 0.11 SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.20 SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 33 0.27 SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 33 0.46 SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61 SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.81 SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.81 SB_812| Best HMM Match : FH2 (HMM E-Value=0) 31 1.1 SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 31 1.1 SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9 SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9 SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 30 3.3 SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3 SB_14242| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3 SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 29 4.3 SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7 SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 5.7 SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 5.7 SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 29 5.7 SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 5.7 SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 5.7 SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 7.5 SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 7.5 SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 7.5 SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.5 >SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) Length = 1052 Score = 35.9 bits (79), Expect = 0.050 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = +3 Query: 570 PPPPXGXGXXFLXPPPXPPXKN--PXPPXXGGG 662 PPPP G G PPP PP + P PP GGG Sbjct: 196 PPPPPGPGGI---PPPPPPIRGGVPPPPPMGGG 225 >SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) Length = 739 Score = 35.1 bits (77), Expect = 0.087 Identities = 16/36 (44%), Positives = 16/36 (44%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXGGG 662 P PPPP G PPP PP P PP GG Sbjct: 195 PPPPPPPPPPGFPGG-APPPPPPPFGAPPPPALNGG 229 >SB_23015| Best HMM Match : WW (HMM E-Value=2.8e-16) Length = 678 Score = 34.7 bits (76), Expect = 0.11 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P ++ PPPP G PPP PP ++P PP Sbjct: 550 PSEEPPPPPPGVD----IPPPLPPSEDPKPP 576 >SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 550 Score = 33.9 bits (74), Expect = 0.20 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +3 Query: 543 GXFXPQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 G + P + PPPP G F PP PP P PP Sbjct: 474 GMYPPPRGFPPPPFGPPPPFYRGPP-PPRGMPPPP 507 >SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) Length = 341 Score = 33.5 bits (73), Expect = 0.27 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +3 Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPP 647 PPPP G PPP PP P PP Sbjct: 292 PPPPPADGSAPAPPPPPPPGGAPPPP 317 Score = 30.7 bits (66), Expect = 1.9 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P PPPP G PPP PP PP Sbjct: 302 PAPPPPPPPGGAPPPPPPPPPPPPGDGGAPP 332 Score = 28.3 bits (60), Expect = 10.0 Identities = 11/24 (45%), Positives = 11/24 (45%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPP 626 P PPPP G PPP PP Sbjct: 314 PPPPPPPPPPPPGDGGAPPPPPPP 337 >SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) Length = 768 Score = 32.7 bits (71), Expect = 0.46 Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 4/40 (10%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKN----PXPPXXGGG 662 P PPPP G PPP PP P PP GGG Sbjct: 660 PPPPPPPPPGGQAGG-APPPPPPPLPGGAAPPPPPPIGGG 698 Score = 28.3 bits (60), Expect = 10.0 Identities = 17/46 (36%), Positives = 17/46 (36%) Frame = +3 Query: 525 PXRGXXGXFXPQKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXGGG 662 P G G P PPPP G PPP P PP GG Sbjct: 667 PPGGQAGGAPPP---PPPPLPGGAAPPPPPPIGGGAPPPPPPGFGG 709 Score = 28.3 bits (60), Expect = 10.0 Identities = 14/28 (50%), Positives = 14/28 (50%) Frame = +3 Query: 321 PGXXPPLGGGXXGPPXKKKXXGGXAPPP 404 P PPL GG PP GG APPP Sbjct: 677 PPPPPPLPGGAAPPP--PPPIGGGAPPP 702 >SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 669 Score = 32.3 bits (70), Expect = 0.61 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P K PPPP PPP PP P PP Sbjct: 370 PTNKPPPPPPPTNG---PPPPPPPTNGPPPP 397 Score = 30.3 bits (65), Expect = 2.5 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P PPPP PPP PP P PP Sbjct: 360 PTNNTPPPPPPTNK---PPPPPPPTNGPPPP 387 Score = 29.5 bits (63), Expect = 4.3 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P PPPP PPP PP P PP Sbjct: 380 PTNGPPPPPPPTNG---PPPPPPPTNGPPPP 407 >SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 504 Score = 31.9 bits (69), Expect = 0.81 Identities = 12/25 (48%), Positives = 12/25 (48%) Frame = +3 Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXP 644 PPPP F PP PP NP P Sbjct: 8 PPPPPPIAAEFTAPPAPPPPPNPAP 32 >SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 964 Score = 31.9 bits (69), Expect = 0.81 Identities = 31/118 (26%), Positives = 34/118 (28%), Gaps = 5/118 (4%) Frame = +3 Query: 324 GXXPPLGGGXXGPPXKKKXXGGXAPPPXK---XXXKXXFLGKXGXPXXFWXPXXPXKKKX 494 G PP G GPP GG PPP G+ G P Sbjct: 491 GQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPP 550 Query: 495 XXXIXFXFFXPXRGXXGXFXP--QKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXGGG 662 + P G G P + PPP G G PP P PP G G Sbjct: 551 GAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPPGAGQG 608 >SB_812| Best HMM Match : FH2 (HMM E-Value=0) Length = 1430 Score = 31.5 bits (68), Expect = 1.1 Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Frame = +3 Query: 570 PPPPXGXGXXFLXPPPXPPXKN-PXPP 647 PPPP G G F PPP PP P PP Sbjct: 653 PPPPPG-GGMFPPPPPPPPGGGVPGPP 678 >SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) Length = 457 Score = 31.5 bits (68), Expect = 1.1 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P PPPP PPP PP P PP Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPP 408 Score = 31.1 bits (67), Expect = 1.4 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +3 Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPP 647 PPPP PPP PP +P PP Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPP 392 Score = 31.1 bits (67), Expect = 1.4 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P PPPP PPP PP P PP Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPP 403 Score = 30.7 bits (66), Expect = 1.9 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P PPPP PPP PP P PP Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPP 409 Score = 30.7 bits (66), Expect = 1.9 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P PPPP PPP PP P PP Sbjct: 385 PPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415 Score = 30.3 bits (65), Expect = 2.5 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P PPPP PPP PP P PP Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414 Score = 29.5 bits (63), Expect = 4.3 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 PQ PPPP PPP PP P PP Sbjct: 393 PQPPPPPPPPPP-----PPPPPPPPPPPPPP 418 Score = 28.3 bits (60), Expect = 10.0 Identities = 12/31 (38%), Positives = 12/31 (38%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P PPPP PP PP P PP Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPP 406 Score = 28.3 bits (60), Expect = 10.0 Identities = 12/30 (40%), Positives = 12/30 (40%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXP 644 P PPPP PPP PP P P Sbjct: 403 PPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432 >SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1000 Score = 30.7 bits (66), Expect = 1.9 Identities = 14/36 (38%), Positives = 14/36 (38%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXGGG 662 P PPPP G PPP P P P GG Sbjct: 915 PGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGG 950 Score = 30.7 bits (66), Expect = 1.9 Identities = 14/30 (46%), Positives = 14/30 (46%) Frame = +3 Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659 PPPP G PPP PP PP GG Sbjct: 945 PPPPGGNA-----PPPPPPPGGSAPPPGGG 969 Score = 29.5 bits (63), Expect = 4.3 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +3 Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPP 647 PPPP G PPP PP P PP Sbjct: 974 PPPPGGSA-----PPPPPPPPPPPPP 994 Score = 28.7 bits (61), Expect = 7.5 Identities = 12/29 (41%), Positives = 12/29 (41%) Frame = +3 Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPPXXG 656 PPPP G PPP P PP G Sbjct: 933 PPPPPGGSAPSQPPPPGGNAPPPPPPPGG 961 >SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 290 Score = 30.7 bits (66), Expect = 1.9 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +3 Query: 549 FXPQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 F P PPPP + PPP PP NP P Sbjct: 88 FSPNPPYPPPPY---PPYPPPPPYPPPPNPPYP 117 Score = 28.7 bits (61), Expect = 7.5 Identities = 12/31 (38%), Positives = 12/31 (38%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P PPPP PP PP P PP Sbjct: 191 PNPPYPPPPNAPNPPPPNPPYPPPPNAPNPP 221 Score = 28.3 bits (60), Expect = 10.0 Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPX--PPXKNPXPP 647 P PPPP L PPP PP P PP Sbjct: 144 PNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPP 176 >SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) Length = 245 Score = 29.9 bits (64), Expect = 3.3 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +3 Query: 525 PXRGXXGXFXPQKKXPPPPXGXGXXFLXPPPXPP 626 P G G + P PPP G PPP PP Sbjct: 199 PYPGQPGMWGPPPMGGPPPMGGPPGGYPPPPPPP 232 >SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1066 Score = 29.5 bits (63), Expect = 4.3 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXGGG 662 P+ + PPPP PPP PP P PP G Sbjct: 862 PRPRRPPPPP-------PPPPPPPPPPPPPPASSTG 890 >SB_14242| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 408 Score = 29.5 bits (63), Expect = 4.3 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = -3 Query: 646 GGXGFXXGGXGGGXKXXXPFPXGGGG 569 GG G GG GGG P GGGG Sbjct: 331 GGSGTSEGGFGGGGATVASRPGGGGG 356 >SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) Length = 258 Score = 29.5 bits (63), Expect = 4.3 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -3 Query: 646 GGXGFXXGGXGGGXKXXXPFPXGGGG 569 GG G+ GG GGG + GGGG Sbjct: 177 GGGGYGGGGHGGGGYGGGGYGGGGGG 202 Score = 29.1 bits (62), Expect = 5.7 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = -3 Query: 646 GGXGFXXGGXGGGXKXXXPFPXGGGGXFFXG 554 GG G+ GG GGG GGGG + G Sbjct: 187 GGGGYGGGGYGGGGGGYGGSGYGGGGGYGGG 217 >SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1324 Score = 29.1 bits (62), Expect = 5.7 Identities = 12/30 (40%), Positives = 12/30 (40%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXP 644 P PPPP PPP PP P P Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPPPPPPTP 1186 >SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) Length = 514 Score = 29.1 bits (62), Expect = 5.7 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P PPP G PPP PP P PP Sbjct: 349 PSMGMAPPPVGGAAP--PPPPPPPVGGPPPP 377 Score = 28.7 bits (61), Expect = 7.5 Identities = 12/29 (41%), Positives = 13/29 (44%) Frame = +3 Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPPXXG 656 PPPP G PPP + P PP G Sbjct: 316 PPPPARMGTAPPPPPPSRSSQRPPPPSRG 344 Score = 28.3 bits (60), Expect = 10.0 Identities = 26/109 (23%), Positives = 32/109 (29%) Frame = +2 Query: 332 PPPWGGGXXAPXXKKXLGXXGPPPXKXXXKKXXFGKXGXPXXFLXPPXXXKKKXXXXXXX 511 PPP G P + G PPP + + G PP ++ Sbjct: 288 PPPPSRGAAPPPPSR--GAPPPPPSRGSAPPPPPARMGTAPP-PPPPSRSSQRPPPPSRG 344 Query: 512 XFFXPXPGXXXXXFXXKKXPPPPXGEXGXXFGPPXPXPXXKPXXPXXXG 658 P G PPPP G GPP P P + P G Sbjct: 345 APPPPSMGMAPPPVGGAAPPPPPPPPVG---GPPPPPPPIEGRPPSSLG 390 >SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) Length = 330 Score = 29.1 bits (62), Expect = 5.7 Identities = 14/41 (34%), Positives = 15/41 (36%) Frame = +3 Query: 525 PXRGXXGXFXPQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647 P G F PPPP PPP P + P PP Sbjct: 286 PPSNTPGMFASSGFQPPPPPPTDFAPPPPPPEPTSELPPPP 326 >SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) Length = 352 Score = 29.1 bits (62), Expect = 5.7 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +3 Query: 573 PPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659 PPP G L PPP PP P PP G Sbjct: 179 PPPAPPGV--LAPPPAPPGVLPPPPAPPG 205 >SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) Length = 867 Score = 29.1 bits (62), Expect = 5.7 Identities = 12/30 (40%), Positives = 12/30 (40%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXP 644 P PPPP PPP PP P P Sbjct: 211 PPPSPPPPPPPPSPSPPRPPPPPPPSPPRP 240 >SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) Length = 305 Score = 29.1 bits (62), Expect = 5.7 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +3 Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPP 647 PPPP G PPP PP P PP Sbjct: 188 PPPPSGG-----PPPPPPPPPPPPPP 208 >SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) Length = 480 Score = 28.7 bits (61), Expect = 7.5 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Frame = +3 Query: 561 KKXPPPPXGXGXXFLX-PPPXPPXKNP 638 + PPPP G L PPP PP + P Sbjct: 354 RSAPPPPPGRAPQPLGGPPPPPPGRRP 380 Score = 28.3 bits (60), Expect = 10.0 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Frame = +3 Query: 321 PGXXP-PLGGGXXGPPXKKKXXGGXAPPP 404 PG P PLGG PP ++ G PPP Sbjct: 361 PGRAPQPLGGPPPPPPGRRPPSGKINPPP 389 >SB_33909| Best HMM Match : FH2 (HMM E-Value=0) Length = 1063 Score = 28.7 bits (61), Expect = 7.5 Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 4/35 (11%) Frame = +3 Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKN----PXPP 647 P PPPP G + PPP PP P PP Sbjct: 695 PPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPP 729 Score = 28.3 bits (60), Expect = 10.0 Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 4/37 (10%) Frame = +3 Query: 561 KKXPPPPXGX----GXXFLXPPPXPPXKNPXPPXXGG 659 KK PPPP G PPP PP P PP G Sbjct: 674 KKVPPPPPPLPVIEGSSLSVPPPPPP---PPPPLLSG 707 >SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) Length = 392 Score = 28.7 bits (61), Expect = 7.5 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Frame = +3 Query: 561 KKXPPPPXGXGXXFL-XPPPXPPXKNP 638 + PPPP G L PPP PP + P Sbjct: 266 RSAPPPPPGRAPQPLGGPPPPPPGRRP 292 Score = 28.3 bits (60), Expect = 10.0 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%) Frame = +3 Query: 321 PGXXP-PLGGGXXGPPXKKKXXGGXAPPP 404 PG P PLGG PP ++ G PPP Sbjct: 273 PGRAPQPLGGPPPPPPGRRPPSGKINPPP 301 >SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 393 Score = 28.7 bits (61), Expect = 7.5 Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 3/34 (8%) Frame = +3 Query: 570 PPPPXGXGXXFLXP---PPXPPXKNPXPPXXGGG 662 PPPP P PP P P PP GGG Sbjct: 181 PPPPGAPAAPPAPPFGGPPSAPPPPPAPPVGGGG 214 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,914,524 Number of Sequences: 59808 Number of extensions: 232559 Number of successful extensions: 1633 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 457 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1173 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2883962642 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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