Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_L17
         (975 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   0.18 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.37 

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect(2) = 0.18
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 609 PPPXPPXKNPXPPXXGG 659
           PPP PP   P  P  GG
Sbjct: 585 PPPPPPMGPPPSPLAGG 601



 Score = 23.0 bits (47), Expect(2) = 0.18
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +3

Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKN 635
           P    PPPP G     + P   PP  N
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLN 553


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.37
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = -3

Query: 655 PXXGGXGFXXGGXGGGX-KXXXPFPXGGGG 569
           P  GG G   G  GGG      P P GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,477
Number of Sequences: 2352
Number of extensions: 7376
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106474641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)