Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_L17
(975 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.18
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.18
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 32 0.54
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.54
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.54
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.54
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.54
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 30 2.2
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.9
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.8
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.0
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 29 5.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.0
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 6.6
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 28 8.8
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 8.8
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 8.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 8.8
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 8.8
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 8.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
PPPP G + PPP PP + P PP G
Sbjct: 287 PPPPPSSGM-WPPPPPPPPGRTPGPPGMPG 315
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.18
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
PPPP G + PPP PP + P PP G
Sbjct: 297 PPPPPSSGM-WPPPPPPPPGRTPGPPGMPG 325
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 32.3 bits (70), Expect = 0.54
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
PPPP G G + PPP P PP G
Sbjct: 40 PPPPVGAGVGYAPPPPRPYGATYAPPPPMG 69
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.54
Identities = 29/98 (29%), Positives = 30/98 (30%)
Frame = +3
Query: 333 PPLGGGXXGPPXKKKXXGGXAPPPXKXXXKXXFLGKXGXPXXFWXPXXPXKKKXXXXIXF 512
PP+ GG PP GG PPP G P P P I
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP----------PGGLPPITGGPPPPPPPGGLPPISG 756
Query: 513 XFFXPXRGXXGXFXPQKKXPPPPXGXGXXFLXPPPXPP 626
P G P PPPP G PPP PP
Sbjct: 757 GPPPPPPPPGGCPPP----PPPPPPGGFKGGPPPPPPP 790
Score = 31.5 bits (68), Expect = 0.94
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
PPPP G PP PP PP GG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 534 GXXGXFXPQKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
G P PPPP G PPP PP PP GG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPP-PPPPGGLPPITGG 741
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPP 647
PPPP G PPP PP PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 403 GGGAXPPXXFFXXGGPXXPPPRGGXXP 323
GG PP GGP PPP GG P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 321 PGXXPPLGGGXXGPPXKKKXXGGXAPPP 404
PG PP+ G GPP GG PPP
Sbjct: 748 PGGLPPISG---GPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +2
Query: 524 PXPGXXXXXFXXKKXPPPPXGEXGXXFGPPXPXP----XXKPXXPXXXGG 661
P PG PPPP G GPP P P P P GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.54
Identities = 29/98 (29%), Positives = 30/98 (30%)
Frame = +3
Query: 333 PPLGGGXXGPPXKKKXXGGXAPPPXKXXXKXXFLGKXGXPXXFWXPXXPXKKKXXXXIXF 512
PP+ GG PP GG PPP G P P P I
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP----------PGGLPPITGGPPPPPPPGGLPPISG 756
Query: 513 XFFXPXRGXXGXFXPQKKXPPPPXGXGXXFLXPPPXPP 626
P G P PPPP G PPP PP
Sbjct: 757 GPPPPPPPPGGCPPP----PPPPPPGGFKGGPPPPPPP 790
Score = 31.5 bits (68), Expect = 0.94
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
PPPP G PP PP PP GG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGG 757
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 534 GXXGXFXPQKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
G P PPPP G PPP PP PP GG
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPP-PPPPGGLPPITGG 741
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPP 647
PPPP G PPP PP PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 403 GGGAXPPXXFFXXGGPXXPPPRGGXXP 323
GG PP GGP PPP GG P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 321 PGXXPPLGGGXXGPPXKKKXXGGXAPPP 404
PG PP+ G GPP GG PPP
Sbjct: 748 PGGLPPISG---GPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +2
Query: 524 PXPGXXXXXFXXKKXPPPPXGEXGXXFGPPXPXP----XXKPXXPXXXGG 661
P PG PPPP G GPP P P P P GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.54
Identities = 32/114 (28%), Positives = 36/114 (31%), Gaps = 3/114 (2%)
Frame = +3
Query: 324 GXXPPLGG--GXXGPPXKKKXXGGXAPPPXKXXXKXXFLGKXGX-PXXFWXPXXPXKKKX 494
G PP+ G PP + G APPP G G P P P
Sbjct: 366 GPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGS--- 422
Query: 495 XXXIXFXFFXPXRGXXGXFXPQKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXG 656
+ P +G G F P PPP G G P PP P P G
Sbjct: 423 --------YGPPQGGPGGFGP-----PPPGGPGAYGPPPTGFPPVGAPPPGAAG 463
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.54
Identities = 29/98 (29%), Positives = 30/98 (30%)
Frame = +3
Query: 333 PPLGGGXXGPPXKKKXXGGXAPPPXKXXXKXXFLGKXGXPXXFWXPXXPXKKKXXXXIXF 512
PP+ GG PP GG PPP G P P P I
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPP----------PGGLPPITGGPPPPPPPGGLPPISG 339
Query: 513 XFFXPXRGXXGXFXPQKKXPPPPXGXGXXFLXPPPXPP 626
P G P PPPP G PPP PP
Sbjct: 340 GPPPPPPPPGGCPPP----PPPPPPGGFKGGPPPPPPP 373
Score = 31.5 bits (68), Expect = 0.94
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
PPPP G PP PP PP GG
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGG 340
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 534 GXXGXFXPQKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
G P PPPP G PPP PP PP GG
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPP-PPPPGGLPPITGG 324
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPP 647
PPPP G PPP PP PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 403 GGGAXPPXXFFXXGGPXXPPPRGGXXP 323
GG PP GGP PPP GG P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPP 320
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 321 PGXXPPLGGGXXGPPXKKKXXGGXAPPP 404
PG PP+ G GPP GG PPP
Sbjct: 331 PGGLPPISG---GPPPPPPPPGGCPPPP 355
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 4/50 (8%)
Frame = +2
Query: 524 PXPGXXXXXFXXKKXPPPPXGEXGXXFGPPXPXP----XXKPXXPXXXGG 661
P PG PPPP G GPP P P P P GG
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXGGG 662
P PPPP G PP PP P PP GG
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPP---PPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXGGG 662
P PPPP G PP PP P PP GG
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPP---PPPPSGAGG 488
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 573 PPPXGXGXXFLXPPPXPPXKNPXPPXXGGG 662
PPP G F+ PPP P P PP GG
Sbjct: 66 PPPVPNG--FIPPPPGPGGIPPPPPMFAGG 93
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 400 GGAXPPXXFFXXGGPXXPPPRGGXXP 323
GG PP F G P PP GG P
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPP 106
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
PPPP G + PPP PP P G
Sbjct: 41 PPPPPPCGGGYEAPPPPPPPSYAGGPSYAG 70
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Frame = +3
Query: 438 KXGXPXXFWXPXXPXKKKXXXXIXFXFFXPXRGXX-GXFXPQKKXPPPPXGXGXXFLXPP 614
K P P +K+ + F F + G F Q PP P L PP
Sbjct: 111 KENVPEILGIEKKPRRKRPARLVEFPVFDDVQDTDLGFFFDQP--PPTPIPTPVPILEPP 168
Query: 615 PXPPXKNPXPP 647
P PP P P
Sbjct: 169 PPPPPVPPLSP 179
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 549 FXPQ-KKXPPPPXGXGXXFLXPPPXPP 626
F P + PPPP F+ PPP PP
Sbjct: 199 FQPMFSQPPPPPLPPNSQFMTPPPRPP 225
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 661 PPPXXGGXGFXXGGXGGGXK-XXXPFPXGGG 572
P P GG G GG GGG P P GGG
Sbjct: 52 PAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 661 PPPXXGGXGFXXGGXGGGXK-XXXPFPXGGG 572
P P GG G GG GGG P P GGG
Sbjct: 52 PAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +3
Query: 570 PPPPXGXGXX---FLXPPPXPPXKNPXPPXXGG 659
PPPP G PP PP +P PP GG
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/76 (28%), Positives = 25/76 (32%)
Frame = +3
Query: 429 FLGKXGXPXXFWXPXXPXKKKXXXXIXFXFFXPXRGXXGXFXPQKKXPPPPXGXGXXFLX 608
F GK P P P K + P G P + PPP G
Sbjct: 225 FRGKRQAPPA-GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS---- 279
Query: 609 PPPXPPXKNPXPPXXG 656
PPP P +P PP G
Sbjct: 280 PPPPPAGGSPPPPRAG 295
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +3
Query: 570 PPPPXGXGXX---FLXPPPXPPXKNPXPPXXGG 659
PPPP G PP PP +P PP GG
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/76 (28%), Positives = 25/76 (32%)
Frame = +3
Query: 429 FLGKXGXPXXFWXPXXPXKKKXXXXIXFXFFXPXRGXXGXFXPQKKXPPPPXGXGXXFLX 608
F GK P P P K + P G P + PPP G
Sbjct: 246 FRGKRQAPPA-GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS---- 300
Query: 609 PPPXPPXKNPXPPXXG 656
PPP P +P PP G
Sbjct: 301 PPPPPAGGSPPPPRAG 316
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +3
Query: 570 PPPPXGXGXX---FLXPPPXPPXKNPXPPXXGG 659
PPPP G PP PP +P PP GG
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/76 (28%), Positives = 25/76 (32%)
Frame = +3
Query: 429 FLGKXGXPXXFWXPXXPXKKKXXXXIXFXFFXPXRGXXGXFXPQKKXPPPPXGXGXXFLX 608
F GK P P P K + P G P + PPP G
Sbjct: 231 FRGKRQAPPA-GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS---- 285
Query: 609 PPPXPPXKNPXPPXXG 656
PPP P +P PP G
Sbjct: 286 PPPPPAGGSPPPPRAG 301
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
PPPP + P PP K P PP G
Sbjct: 550 PPPPPHPEEEYATPYTVPPGKQPFPPFGEG 579
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +3
Query: 543 GXFXPQKKXPPPPXGXGXXFLXPPPXPPXK----NPXPPXXGGGXXXXXTHD 686
G P PPPP PPP PP P PP GG ++D
Sbjct: 555 GTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGPASND 606
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -3
Query: 661 PPPXXGGXGFXXGGXGGGXKXXXPFPXGGGGXFFXGK-XXPXXPRXG 524
PPP GG GG GGG + PF G FF P P G
Sbjct: 29 PPPSKGGGA---GGGGGGEQQQVPFQMIPPGHFFANPFLNPYIPTAG 72
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -3
Query: 661 PPPXXGGXGFXXGGXGGGXKXXXPFPXGGGGXFFXGK-XXPXXPRXG 524
PPP GG GG GGG + PF G FF P P G
Sbjct: 29 PPPSKGGGA---GGGGGGEQQQVPFQMIPPGHFFANPFLNPYIPTAG 72
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 661 PPPXXGGXGFXXGGXGGGXKXXXPFPXGGGG 569
PP GG G GG GGG GGGG
Sbjct: 115 PPACGGGCGGGGGGCGGGCGGGGGGGCGGGG 145
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -3
Query: 661 PPPXXGGXGFXXGGXGGGXKXXXPFPXGGGGXFFXGK-XXPXXPRXG 524
PPP GG GG GGG + PF G FF P P G
Sbjct: 29 PPPSKGGGA---GGGGGGEQQQVPFQMIPPGHFFANPFLNPYIPTAG 72
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPP-----XKNPXPPXXGG 659
PPPP + PPP PP KNP P G
Sbjct: 1377 PPPPPLFSPSMILPPPPPPLPSEEKKNPLPTANNG 1411
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = +3
Query: 570 PPPPX---GXGXXFLXPPPXPPXKNPXPP 647
PPPP G ++ PP PP P PP
Sbjct: 117 PPPPVQYQNQGPQYIEAPPPPPSPPPPPP 145
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPPXXGG 659
P K PPPP L P P + P PP G
Sbjct: 643 PPPKRPPPPHRQTPHELYPEEQPYVRRPPPPQNRG 677
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 570 PPPPXGXGXXFLXPPPXPPXKN--PXPPXXGG 659
P PP G PPP PP + P PP G
Sbjct: 134 PGPPGRDGALLPGPPPKPPCQKCPPGPPGPAG 165
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 573 PPPXGXGXXFLXPPPXPP 626
PPP G G F+ PPP PP
Sbjct: 664 PPPGGLGG-FMPPPPPPP 680
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 573 PPPXGXGXXFLXPPPXPP 626
PPP G G F+ PPP PP
Sbjct: 664 PPPGGLGG-FMPPPPPPP 680
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647
P K PPPP + PPP P P PP
Sbjct: 86 PAKPTPPPPPPKPT--IRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 555 PQKKXPPPPXGXGXXFLXPPPXPPXKNPXPP 647
P K PPPP + PPP P P PP
Sbjct: 308 PAKPTPPPPPPKPT--IRPPPIPASPPPRPP 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,343,684
Number of Sequences: 27780
Number of extensions: 234197
Number of successful extensions: 1751
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2531861596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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