Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_L16
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 449 e-126
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 449 e-126
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 246 e-104
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 306 1e-83
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 229 2e-60
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 229 2e-60
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 213 1e-55
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 4e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 96 3e-20
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 96 3e-20
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 96 3e-20
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 94 1e-19
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 94 1e-19
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 60 3e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 1e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 46 5e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 45 6e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 45 8e-05
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 43 3e-04
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 39 0.004
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 38 0.010
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.013
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.12
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.12
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.21
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.48
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 3.4
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 3.4
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 3.4
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 3.4
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 3.4
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 3.4
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 3.4
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 3.4
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 29 4.5
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 29 4.5
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 5.9
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 449 bits (1107), Expect = e-126
Identities = 215/272 (79%), Positives = 228/272 (83%)
Frame = +3
Query: 75 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 255 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 434
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 435 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 614
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 615 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKKAKLTENASLKLSMPSCHLXA 794
IGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERK+ + L+
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 795 PLTSPCVFPCXTYTKSGGIGTVPVGRVETGVL 890
P P P K GGIGTVPVGRVETG++
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGII 272
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 449 bits (1107), Expect = e-126
Identities = 215/272 (79%), Positives = 228/272 (83%)
Frame = +3
Query: 75 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 255 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 434
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 435 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 614
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 615 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKKAKLTENASLKLSMPSCHLXA 794
IGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERK+ + L+
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 795 PLTSPCVFPCXTYTKSGGIGTVPVGRVETGVL 890
P P P K GGIGTVPVGRVETG++
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGII 272
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 246 bits (602), Expect(2) = e-104
Identities = 113/117 (96%), Positives = 116/117 (99%)
Frame = +3
Query: 75 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 255 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 425
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 151 bits (366), Expect(2) = e-104
Identities = 73/125 (58%), Positives = 84/125 (67%)
Frame = +3
Query: 516 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 695
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 696 MPWFKGWQVERKKAKLTENASLKLSMPSCHLXAPLTSPCVFPCXTYTKSGGIGTVPVGRV 875
MPWFKGW VERK+ + L+ P P P K GGIGTVPVGRV
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRV 233
Query: 876 ETGVL 890
ETG++
Sbjct: 234 ETGII 238
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 306 bits (752), Expect = 1e-83
Identities = 165/256 (64%), Positives = 181/256 (70%)
Frame = +3
Query: 75 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 255 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 434
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 435 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 614
GEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++ +
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR-----LFH 172
Query: 615 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKKAKLTENASLKLSMPSCHLXA 794
+ +P + L + + +K L E S +L PS H A
Sbjct: 173 LSQSPDSTE---------TTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSHHNA 223
Query: 795 PLTSPCVFPCXTYTKS 842
LT VF T+S
Sbjct: 224 QLTDHSVFHSRMCTRS 239
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +1
Query: 580 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKQS*RKMP 756
+S + P +SRR T Q L D TETTC C GSRDG + RK++ + P
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERP 210
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 229 bits (560), Expect = 2e-60
Identities = 109/211 (51%), Positives = 153/211 (72%), Gaps = 1/211 (0%)
Frame = +3
Query: 84 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 263
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 264 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 443
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 444 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 620
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 621 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 713
++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 345 FSKP--KFVPVSGFTGENLIK-RMELDWYDG 372
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 743 DGKCLIEALDAILPPXRPTDKPLRLPLQXVYKI 841
DG CL+E +D+ + P P+D PLR+ + V K+
Sbjct: 371 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKV 403
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 229 bits (560), Expect = 2e-60
Identities = 109/211 (51%), Positives = 153/211 (72%), Gaps = 1/211 (0%)
Frame = +3
Query: 84 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 263
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 264 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 443
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 444 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 620
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 621 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 713
++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 363 FSKP--KFVPVSGFTGENLIK-RMELDWYDG 390
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 743 DGKCLIEALDAILPPXRPTDKPLRLPLQXVYKI 841
DG CL+E +D+ + P P+D PLR+ + V K+
Sbjct: 389 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKV 421
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 213 bits (520), Expect = 1e-55
Identities = 98/215 (45%), Positives = 146/215 (67%), Gaps = 3/215 (1%)
Frame = +3
Query: 78 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 257
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 258 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 437
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 438 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 617
EFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 618 GYNPAA-VAFVPISGWHGDNMLEPST--KMPWFKG 713
G+NP + +VP SG G + + T + W+ G
Sbjct: 284 GFNPKTDITYVPCSGLTGAFIKDRPTGSEGNWYSG 318
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 4e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +3
Query: 75 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 254
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 255 DKLKAER 275
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 95.9 bits (228), Expect = 3e-20
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Frame = +3
Query: 81 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 260
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 261 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 440
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 441 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 614
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 615 IGY 623
GY
Sbjct: 200 FGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 95.9 bits (228), Expect = 3e-20
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Frame = +3
Query: 81 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 260
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 261 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 440
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 441 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 614
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 615 IGY 623
GY
Sbjct: 201 FGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 95.9 bits (228), Expect = 3e-20
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Frame = +3
Query: 81 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 260
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 261 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 440
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 441 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 614
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 615 IGY 623
GY
Sbjct: 201 FGY 203
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 93.9 bits (223), Expect = 1e-19
Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
Frame = +3
Query: 87 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 260
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 261 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 440
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 441 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 620
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 621 YNPAAVAFV 647
+N A +
Sbjct: 195 FNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 93.9 bits (223), Expect = 1e-19
Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
Frame = +3
Query: 87 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 260
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 261 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 440
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 441 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 620
E QT+EH +LA +GVK + + +NK D E E + ++ E + G
Sbjct: 146 ME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHG 194
Query: 621 YNPAAVAFV 647
+N A +
Sbjct: 195 FNGDATPVI 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 59.7 bits (138), Expect = 3e-09
Identities = 47/148 (31%), Positives = 67/148 (45%)
Frame = +3
Query: 99 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 278
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 279 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 458
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 459 KNGQTREHALLAFTLGVKQLIVGVNKMD 542
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 56.0 bits (129), Expect = 3e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Frame = +3
Query: 99 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 278
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 279 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 458
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 459 KNGQTREHALLAFTLGVKQLIVGVNKMD 542
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.0 bits (129), Expect = 3e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +3
Query: 99 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 278
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 279 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 437
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect(2) = 1e-05
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +3
Query: 222 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 398
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 399 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 542
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 1e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 102 IVVIGHVDSGKST 140
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 45.6 bits (103), Expect = 5e-05
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 3/199 (1%)
Frame = +3
Query: 96 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 275
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 276 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 452
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 453 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--N 626
I QT EH LLA ++I+ +NK D E + + E K+V +K +G N
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDEN 162
Query: 627 PAAVAFVPISGWHGDNMLE 683
V G+ + ML+
Sbjct: 163 SPIVEMSLADGYFKEEMLQ 181
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 45.2 bits (102), Expect = 6e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +3
Query: 75 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 227
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 228 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 395
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 396 QADCAVLIVAAGTG 437
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 44.8 bits (101), Expect = 8e-05
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Frame = +3
Query: 75 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 227
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 228 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 395
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 396 QADCAVLIVAAGTG 437
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 42.7 bits (96), Expect = 3e-04
Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 11/199 (5%)
Frame = +3
Query: 39 FDTQFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKE 209
F ++IRD P K+ + V+G+VD+GKST G L + G RT K
Sbjct: 123 FTEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKH 181
Query: 210 AQEMGKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 371
E G+ S +L + + +D + +K VT ID GH ++
Sbjct: 182 EFESGRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYL 240
Query: 372 KNMITGTS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 545
K I G + D +L++ A G G T+EH LA +L V +V V K+D
Sbjct: 241 KTTIFGMTGHMPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDM 292
Query: 546 TEPPYSEPRFEEIKKEVSS 602
E + I + V S
Sbjct: 293 CPANILEETMKNITRLVRS 311
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 39.1 bits (87), Expect = 0.004
Identities = 75/297 (25%), Positives = 114/297 (38%), Gaps = 13/297 (4%)
Frame = +3
Query: 39 FDTQFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKE 209
F ++IRD P K+ + V+G+VD+GKST G L + G RT K
Sbjct: 123 FTEVWIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKH 181
Query: 210 AQEMGKGSFKYAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 371
E G+ S +L + + +D + +K VT ID GH ++
Sbjct: 182 EFESGRTSSVGNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYL 240
Query: 372 KNMITGTSQ---ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 542
K I G + + +L++ A G G T+EH LA +L V +V V K+D
Sbjct: 241 KTTIFGMHRPYARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKID 292
Query: 543 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKM-PWFKGWQ 719
P Y EE K ++ ++ P V + N PS K+ P F+
Sbjct: 293 MC-PAYI---LEETMKNITRLVRSAKKLPILVRNMDDCVHAAVNF--PSKKVCPIFQVSN 346
Query: 720 VERKKAKLTENASLKLSMPSCHLXAPLTSPCVFPCXTYTKSGGIGTVPVGRVETGVL 890
VE L L+M P F G+GT+ G + +G +
Sbjct: 347 VEGTNLPLLRQF---LNMVPLRRQLNENDPAHFQIDDIYWVDGVGTIASGTLLSGTI 400
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.7 bits (86), Expect = 0.006
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 81 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 257
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 258 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 422
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.7 bits (86), Expect = 0.006
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 81 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 257
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 258 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 422
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 37.9 bits (84), Expect = 0.010
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 8/199 (4%)
Frame = +3
Query: 48 QFVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEM 221
+ ++R P+ ++ + + V+G D GKST G L C G K I F + E+
Sbjct: 154 EVLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEV 211
Query: 222 GKGSFKYAWVLDKLKAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITG 389
G K + V + + RG ++ A E S VT+ID G + K I G
Sbjct: 212 RTG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269
Query: 390 TS--QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYS 563
+ A L+VAA + GI+ TREH L L + ++ + KMD +
Sbjct: 270 LTGYTPHFACLVVAA-----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD---- 317
Query: 564 EPRFEEIKKEVSSYIKKIG 620
++I K+VS+ + K G
Sbjct: 318 RQGLKKIIKDVSNLVAKAG 336
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 330 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 509
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 510 KQLIVGVNKMDSTEPPYSEPRFEEI 584
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 99 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 278
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 279 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 437
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +3
Query: 99 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 278
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 279 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 437
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 535 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 407
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +3
Query: 339 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 518
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 519 IVGVNKMDSTEPPYSEPR 572
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 177 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 278
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 177 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 278
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 598 PHTSRRLATTQLLSLSCPFLD 660
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 598 PHTSRRLATTQLLSLSCPFLD 660
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 29.5 bits (63), Expect = 3.4
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 14/162 (8%)
Frame = +3
Query: 363 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 530
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 531 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 680
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 564
Query: 681 EPSTKMPWFKGWQVERKKAKLTENASLKLSMPSCHLXAPLTS 806
+P + M +G +R +E+ + + L LTS
Sbjct: 565 DPISSMNIGRGTLAQRFGTTSSESDGISVHNFLISLELILTS 606
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 29.5 bits (63), Expect = 3.4
Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 14/162 (8%)
Frame = +3
Query: 363 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 530
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 531 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 680
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 589
Query: 681 EPSTKMPWFKGWQVERKKAKLTENASLKLSMPSCHLXAPLTS 806
+P + M +G +R +E+ + + L LTS
Sbjct: 590 DPISSMNIGRGTLAQRFGTTSSESDGISVHNFLISLELILTS 631
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 598 PHTSRRLATTQLLSLSCPFLD 660
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 598 PHTSRRLATTQLLSLSCPFLD 660
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/75 (24%), Positives = 30/75 (40%)
Frame = -2
Query: 841 DFVYVLQGKTQGLVSGAXRWQDGIESFNEAFSVSFAFLRSTCHPLNQGILVEGSNMLSPC 662
D + + +G G+V + + S E F+ F+RS+ H N G++ G
Sbjct: 276 DTIRINEGSKPGIVVKFEKVFTPVFSQKEVFANVEEFIRSSLHGYNVGLIAYGQTGSGKT 335
Query: 661 HPEMGTKATAAGL*P 617
H G G+ P
Sbjct: 336 HTMRGGNGEEEGIIP 350
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/75 (24%), Positives = 30/75 (40%)
Frame = -2
Query: 841 DFVYVLQGKTQGLVSGAXRWQDGIESFNEAFSVSFAFLRSTCHPLNQGILVEGSNMLSPC 662
D + + +G G+V + + S E F+ F+RS+ H N G++ G
Sbjct: 276 DTIRINEGSKPGIVVKFEKVFTPVFSQKEVFANVEEFIRSSLHGYNVGLIAYGQTGSGKT 335
Query: 661 HPEMGTKATAAGL*P 617
H G G+ P
Sbjct: 336 HTMRGGNGEEEGIIP 350
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 96 INIVVIGHVDSGKSTTT 146
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.9
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 518 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 360
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 359 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 240
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,725,040
Number of Sequences: 27780
Number of extensions: 446068
Number of successful extensions: 1372
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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