Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_L14
(849 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22016| Best HMM Match : HSP90 (HMM E-Value=0) 152 4e-37
SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10) 122 3e-28
SB_50934| Best HMM Match : HSP90 (HMM E-Value=0) 97 1e-20
SB_45717| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_37957| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_11623| Best HMM Match : ABC1 (HMM E-Value=0) 29 4.8
SB_32938| Best HMM Match : DUF204 (HMM E-Value=0.6) 29 6.3
>SB_22016| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 581
Score = 152 bits (368), Expect = 4e-37
Identities = 69/108 (63%), Positives = 85/108 (78%)
Frame = +2
Query: 524 QAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGR 703
+AGADISMIGQFGVGFYS+YLVA++V V +KHNDDEQY+WES+AGGSFTV+ DSGEPLGR
Sbjct: 59 KAGADISMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYIWESAAGGSFTVKRDSGEPLGR 118
Query: 704 GTKIVLHVKEDLADFMXXXXXXXXXXXXXQFIGYPIKLMVEKNAKKTV 847
GTKIVL++KED +++ QFIGYP+ L+V+K K V
Sbjct: 119 GTKIVLYLKEDQTEYLEEKRIKEIVKKHSQFIGYPLSLLVQKERDKEV 166
>SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10)
Length = 739
Score = 122 bits (295), Expect = 3e-28
Identities = 69/168 (41%), Positives = 99/168 (58%), Gaps = 5/168 (2%)
Frame = +2
Query: 329 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 508
K+R+ LT ++ L I I ++ GT TI D G+GMT+ +L+++LG IAKSG+K
Sbjct: 100 KVRHFFLTGKDVSETETSLEIMIETDQEAGTFTIQDNGVGMTEEELMDHLGVIAKSGSKV 159
Query: 509 FMEALQAGADIS---MIGQFGVGFYSSYLVADRVTVHSK--HNDDEQYVWESSAGGSFTV 673
FME L+ A S +IGQFGVGFYS+++VAD+V V++K + + Y W S GS+
Sbjct: 160 FMEKLKNEARSSHENIIGQFGVGFYSTFMVADKVDVYTKSYQPNSQGYFWTSDGSGSYEY 219
Query: 674 RPDSGEPLGRGTKIVLHVKEDLADFMXXXXXXXXXXXXXQFIGYPIKL 817
+G + RGTK+VLH+KED F F+G+PI L
Sbjct: 220 AEANG--VARGTKLVLHLKEDCKRFAMKTAVEDIVQRYSNFVGFPIYL 265
>SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 855
Score = 97.5 bits (232), Expect = 1e-20
Identities = 69/171 (40%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Frame = +2
Query: 329 KIRYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 508
KIR SLTD + DSG EL IKI +K L + DTGIGMTK +L+ NL GT A
Sbjct: 117 KIRLMSLTDKTAFDSGDELSIKIKADKENNILHVTDTGIGMTKEELIKNL------GTIA 170
Query: 509 FMEALQAGADISMIGQFGVGFYSSYLVADRVTVHSKHNDDEQYVWESSAGGSFTVRPD-S 685
S +ADRV V SK+NDD+QY+WES A SF++ D
Sbjct: 171 ----------------------KSGTIADRVIVTSKNNDDKQYIWESDA-SSFSISEDPR 207
Query: 686 GEPLGRGTKIVLHVKEDLADFMXXXXXXXXXXXXXQFIGYPIKLMVEKNAK 838
G L RGT I LH+KE+ D++ QFI +PI L K +
Sbjct: 208 GPTLKRGTTISLHLKEEARDYLEPETIKDLVKKYSQFINFPIFLWTSKTTE 258
Score = 44.8 bits (101), Expect = 9e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1
Query: 253 IINTFYSNKEIFLRELISNSSDAL 324
IIN+ Y NKEIFLRELISNSSDAL
Sbjct: 92 IINSLYRNKEIFLRELISNSSDAL 115
>SB_45717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/57 (21%), Positives = 31/57 (54%)
Frame = +2
Query: 359 SKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 529
+K+ G+E+ + ++NE ++ +G ++ D++ N+G T++ +E +A
Sbjct: 265 AKISDGQEIKFSVFIDENEYRSICLNLQVGPSEPDVLKNIGVTRMPETRSNVENCRA 321
>SB_37957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 552 DSSVLASTPVTWSLTA*LFTLNTMTTSNTCGNLLQEARSQSAQTAVSPLVEVQRSSFTSK 731
+ S TPVT T+ + TTS T G ++ + +++ T +PLV +R+SFT +
Sbjct: 54 EKSTKRKTPVTKGTTS----VTKETTSVTKG-IISVTKGEASITIGAPLVTKERTSFTKE 108
Query: 732 RT 737
T
Sbjct: 109 TT 110
>SB_11623| Best HMM Match : ABC1 (HMM E-Value=0)
Length = 780
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +1
Query: 382 AVHQDHSQQERGHSYDHRYRYWYDQ----GRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 549
AV H+ RGHS+ W G F + FG+ W + G+S CR
Sbjct: 150 AVGVPHAHSYRGHSFRRGATTWAFHLGIPGEFIQVFGD----WASDAYRGNSL-CRANCQ 204
Query: 550 WTVRCWLLLQ 579
W +RC ++ Q
Sbjct: 205 WLIRCVVIFQ 214
>SB_32938| Best HMM Match : DUF204 (HMM E-Value=0.6)
Length = 433
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 628 VVIVFRVNS-HAVSDQVTGVEANTELSNHADVGTCLKSLHESFSTRFRDGSQIV 470
+V+ + N+ H ++ QV + + + H G CLKSL F + RDG V
Sbjct: 374 IVLSLKFNTGHEMNVQVQSKLYSVKDNTHVTWGACLKSL--DFECKMRDGQSFV 425
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,594,069
Number of Sequences: 59808
Number of extensions: 561676
Number of successful extensions: 1509
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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