Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_L12
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 38 0.013
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 38 0.013
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 37 0.018
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 37 0.023
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 36 0.031
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 35 0.094
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 35 0.094
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 35 0.094
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 35 0.094
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 35 0.094
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 35 0.094
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 34 0.12
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 34 0.16
AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical ... 34 0.16
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.22
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 33 0.22
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 33 0.22
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 33 0.22
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 33 0.38
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 33 0.38
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.38
AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophi... 33 0.38
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 33 0.38
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 33 0.38
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 33 0.38
Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical pr... 32 0.50
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 32 0.50
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 32 0.50
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.50
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 32 0.50
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 32 0.50
Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical pr... 32 0.66
Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 31 0.88
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 0.88
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 0.88
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 0.88
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 31 0.88
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 0.88
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 0.88
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 31 0.88
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 31 0.88
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 31 0.88
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 31 1.2
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 31 1.2
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 31 1.5
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 1.5
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 31 1.5
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 31 1.5
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 31 1.5
AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical ... 31 1.5
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 31 1.5
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 30 2.0
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 30 2.0
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 30 2.0
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 30 2.0
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 30 2.0
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 30 2.0
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 30 2.0
AL021173-1|CAE17951.1| 89|Caenorhabditis elegans Hypothetical ... 30 2.0
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z75552-4|CAA99942.1| 624|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z69787-12|CAM84810.1| 234|Caenorhabditis elegans Hypothetical p... 30 2.7
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical p... 30 2.7
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 2.7
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 30 2.7
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 30 2.7
Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81463-1|CAB03850.1| 342|Caenorhabditis elegans Hypothetical pr... 29 3.5
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 3.5
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 3.5
AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical ... 29 3.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.5
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 29 3.5
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 3.5
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 29 4.7
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 29 4.7
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical pr... 29 6.2
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 29 6.2
AF067211-9|AAC16994.1| 120|Caenorhabditis elegans Hypothetical ... 29 6.2
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 29 6.2
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 8.2
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 28 8.2
U20864-9|AAC46661.1| 123|Caenorhabditis elegans Lsm sm-like pro... 28 8.2
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 8.2
AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical... 28 8.2
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 448 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 567
GP +L VSN+ F D D+K +F +FG++ + ++ G
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG 190
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 448 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 567
GP +L VSN+ F D D+K +F +FG++ + ++ G
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG 190
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 37.1 bits (82), Expect = 0.018
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 584 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA-TSEINTLRPEARNRIGGASVGGTIRN 760
A + F + D +KAM+++NG L+G + LA + +P R R G GG N
Sbjct: 413 AFIHFNERDDCLKAMEEWNGKELEGTVVEASLAKPPQEKKKKPVMRGR-GFGGAGGGAGN 471
Query: 761 NPKRGG 778
+ +RGG
Sbjct: 472 HGQRGG 477
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSN--RSGGVQRGRNRG 330
GGG + R G GGG GFR GG+ R RG
Sbjct: 543 GGGFRGGMRGSPRGGMGGGGGFRGGPPGRGGMANRRGRG 581
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 36.7 bits (81), Expect = 0.023
Identities = 22/39 (56%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 220 GGGAGRK-FDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
GGG GR FD GRGGG GFR GG RG +RGG
Sbjct: 326 GGGGGRGGFDG----GRGGGGGFRGGDRGGF-RGGDRGG 359
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGG--AGFRSNRSGGVQ---RGRNRGGITKSTNYSRGDVN 372
G G G F R G GG GFR GG + RG +RGG G+ N
Sbjct: 337 GRGGGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGGDRGGDRGGFRGGRGVGGGNAN 392
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 36.3 bits (80), Expect = 0.031
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
GGG R D GRGGG GFR R GG + G RGG
Sbjct: 535 GGGGFRGGDRGGFRGRGGGGGFRGGR-GGDRGGGFRGG 571
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 34.7 bits (76), Expect = 0.094
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 460 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
L V N++ ++D +++ FS FG + SA V D +GRS
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRS 382
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 34.7 bits (76), Expect = 0.094
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 460 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
L V N++ ++D +++ FS FG + SA V D +GRS
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRS 382
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 34.7 bits (76), Expect = 0.094
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 460 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
L V NLD V D +K+ F +G + SA V D +GRS
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRS 356
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 34.7 bits (76), Expect = 0.094
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 460 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
L V NLD V D +K+ F +G + SA V D +GRS
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRS 296
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 34.7 bits (76), Expect = 0.094
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 460 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
L V NLD V D +K+ F +G + SA V D +GRS
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRS 293
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 34.7 bits (76), Expect = 0.094
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 460 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
L V NLD V D +K+ F +G + SA V D +GRS
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRS 356
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 223 GGAGRKFDANKR-TGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 399
GG GR D R + RGG GF GG RG +RGG RG ++
Sbjct: 156 GGRGRGGDRGGRGSDRGGRGGFGRGGGGGF-RGGDRGGFGGGRGGFRGGDRGGFRGGRGG 214
Query: 400 DFGER 414
DFG R
Sbjct: 215 DFGGR 219
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = +1
Query: 256 RTGRGGGAGFRSNRSGGVQRGRNRGG 333
R GRGGG GFR R GG G RGG
Sbjct: 4 RGGRGGGGGFRGGRGGG-GGGGFRGG 28
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1
Query: 214 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
R G G G F + G GGG GFR R GG + G RGG
Sbjct: 4 RGGRGGGGGFRGGR--GGGGGGGFRGGR-GGDRGGGFRGG 40
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGG-AGFRSNRSGGVQRGR 321
G G G F R G GGG GFR GG + GR
Sbjct: 178 GRGGGGGFRGGDRGGFGGGRGGFRGGDRGGFRGGR 212
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 584 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEIN 697
A V F +A A +A+ Q+NGV +GRA+ + LA + N
Sbjct: 48 AFVEFTEEAAAQRAVDQFNGVDFNGRALRVNLAQNRNN 85
>AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical
protein C02B10.4 protein.
Length = 211
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 439 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
I TGP+ L++ NL V+ D++ELF ++ + +HY +G S
Sbjct: 88 IHTGPSTLIIKNLATTVTQEDLEELFEQYE-PELVQLHYGPTGES 131
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = +1
Query: 214 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVN 372
R GGG G G GGG G+ GG RG RGG S DV+
Sbjct: 29 RGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGGSNGSAGGRLRDVD 81
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
G G GR + T R G R R GG + GR RGG
Sbjct: 156 GRGGGRTNSGGEETARDTDGGERGGRGGGRRGGRGRGG 193
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 214 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
R GG G + D+ R GGA R G + G RGG
Sbjct: 120 RRGGRGGIRHDSGSRDAEEGGAPRGGGRGGSRRGGGGRGG 159
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAG-----FRSNRSGGVQRGRNRGGITKSTNYSRGDVN-STW 381
GGGAG F +G G AG F SNR GG G GG + Y G N S
Sbjct: 282 GGGAGGMFRNILSSGGGAAAGSMLGRFLSNRGGGGGGGGGMGGGNRGYGYQGGGSNPSGQ 341
Query: 382 KHDMFNDFG 408
+ +++D G
Sbjct: 342 QGPVYDDNG 350
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 220 GGGAGR--KFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
GGG GR + N+ G GG G+ +N GG RG RGG
Sbjct: 26 GGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGG 65
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 223 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
GG GR D G GG + N GG G RGG
Sbjct: 137 GGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGG 173
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 199 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
A ++ GG G + + GGG GF R GG G NR G
Sbjct: 593 APRRPFTNGGFGAHSSLSSTSNSGGGGGFSGPRRGGFNSGMNRQG 637
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +1
Query: 214 RIGGG---AGRKFDANK-RTGRGGGAGFRSN----RSGGVQRGRNRG 330
RIGGG R+F A R GRGGG F N SGG G G
Sbjct: 536 RIGGGQRGGNRRFGATDYRVGRGGGGSFGGNFSNYNSGGATGGFGSG 582
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 199 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
A ++ GG G + + GGG GF R GG G NR G
Sbjct: 577 APRRPFTNGGFGAHSSLSSTSNSGGGGGFSGPRRGGFNSGMNRQG 621
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +1
Query: 214 RIGGG---AGRKFDANK-RTGRGGGAGFRSN----RSGGVQRGRNRG 330
RIGGG R+F A R GRGGG F N SGG G G
Sbjct: 520 RIGGGQRGGNRRFGATDYRVGRGGGGSFGGNFSNYNSGGATGGFGSG 566
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 199 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
A ++ GG G + + GGG GF R GG G NR G
Sbjct: 574 APRRPFTNGGFGAHSSLSSTSNSGGGGGFSGPRRGGFNSGMNRQG 618
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +1
Query: 214 RIGGG---AGRKFDANK-RTGRGGGAGFRSN----RSGGVQRGRNRG 330
RIGGG R+F A R GRGGG F N SGG G G
Sbjct: 517 RIGGGQRGGNRRFGATDYRVGRGGGGSFGGNFSNYNSGGATGGFGSG 563
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 214 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 345
R GGG G ++ + R G GGG +R GG + G GG +S
Sbjct: 214 RYGGGGGDRYGGD-RYGGGGGRRGSPDRRGGFRSGGGGGGYMRS 256
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 214 RIGGGAGRKFDANKRTG-RGGGAGFRSNRSGGVQRGRNR 327
R GGG GR+ ++R G R GG G RSGG G +R
Sbjct: 227 RYGGGGGRRGSPDRRGGFRSGGGGGGYMRSGGGGGGPDR 265
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 451 PTKLL-VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRS 573
P+K L V NL ++ D++++F EFG + + YDR SG S
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNS 116
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
G G ++ ++R G GGG G R GG + G +R G
Sbjct: 192 GSRGGDRYGGDRRGGGGGGGGDRYGGGGGDRYGGDRYG 229
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +1
Query: 214 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
R GGG G +F N R RGG R GG G +R G
Sbjct: 179 RFGGGGGDRF--NDRGSRGGDRYGGDRRGGGGGGGGDRYG 216
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 202 NKKTRIGGGAGRKFDANKRTGRGGGAG-FRSNRSGG-VQRGRNRGG 333
++ R GG GR + R GRG GAG FR GG G RGG
Sbjct: 92 DRSDRGGGRGGRGGNFGDRGGRGRGAGGFRRGGEGGRFNEGERRGG 137
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 397 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 576
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 272 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 331
Query: 577 XY 582
Y
Sbjct: 332 GY 333
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 220 GGGAGRKFDANKR-TGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 363
GGG G R R GG G+ +R G RG +RGG ST G
Sbjct: 262 GGGGGFGGGGRDRFNDRSGGGGYGGDRDRGGDRGGDRGGSRYSTGGGSG 310
>AF016672-7|AAB66119.1| 378|Caenorhabditis elegans Vig (drosophila
vasa intronic gene)ortholog protein 1, isoform a
protein.
Length = 378
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 223 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 363
GGAGR D + + G NR GG +RG RG + RG
Sbjct: 80 GGAGRPRDGERVSNENGDRPQGENRRGGPRRGGERGAARPAGRGGRG 126
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 397 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 576
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 272 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 331
Query: 577 XY 582
Y
Sbjct: 332 GY 333
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 397 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 576
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 247 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 306
Query: 577 XY 582
Y
Sbjct: 307 GY 308
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 397 NDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 576
N F S + K+ + L +++ +KEL FG LK+ S++ D G S
Sbjct: 250 NTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSK 309
Query: 577 XY 582
Y
Sbjct: 310 GY 311
Score = 32.3 bits (70), Expect = 0.50
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 202 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
N K+ GGG G D ++ RGGG G +RS +R R GG
Sbjct: 42 NLKSSTGGGGGED-DNDRGERRGGGGGGDRDRSRSRERRRGGGG 84
>Z82266-4|CAB05180.1| 227|Caenorhabditis elegans Hypothetical
protein F23B2.6 protein.
Length = 227
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 581 TADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEAR---NR--IGGASVG 745
T D+ +K DA + ++++ GV LDG+ M+ + S +PE R NR G +
Sbjct: 121 TGDITL-KKYDADRLIQKFAGVALDGKVMHFAVIESSNFARKPEIRGTPNRRQSSGKPIN 179
Query: 746 GTIRNNPKR 772
+ N P+R
Sbjct: 180 RKVANPPRR 188
Score = 31.5 bits (68), Expect = 0.88
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 2/135 (1%)
Frame = +1
Query: 169 IEMALDDIIKANKKTR--IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITK 342
I+M+L DII N+K + + + ++ G G +SGG RG R G T
Sbjct: 7 IDMSLSDIISTNRKNKKVVKKPIKKSAGGIRKRGNASNVGTPRRQSGGTSRGGGRMGNT- 65
Query: 343 STNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSE 522
S G ++ K N +SNL V SD++ELF
Sbjct: 66 -VRRSAGGSSNDNKQVRIN----------------------ISNLAETVISSDLQELFGA 102
Query: 523 FGILKSASVHYDRSG 567
F + K SV+++ +G
Sbjct: 103 FNLHK-VSVNFNENG 116
>Z68302-2|CAA92631.1| 630|Caenorhabditis elegans Hypothetical
protein ZK792.5 protein.
Length = 630
Score = 32.3 bits (70), Expect = 0.50
Identities = 27/71 (38%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +1
Query: 214 RIGGGAGRKFDA----NKRTGRGGGA-GFRSNR---SGGVQRGRNRGGITKSTNYSRGDV 369
R GGG GR D N R GRGGG GF NR +G ++ R G TN + D
Sbjct: 56 RGGGGRGRGGDGGFRRNDRGGRGGGGRGFGGNREFSAGDFEKQYGRVGGGDDTNSGQPDS 115
Query: 370 NSTWKHDMFND 402
FND
Sbjct: 116 YGQADSASFND 126
>Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical
protein C01F6.5 protein.
Length = 223
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +1
Query: 277 AGFRSNRSGGVQRGRNRGGITKS-TNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGP 453
AG R + ++R + GG+ K + + G G R + R+
Sbjct: 13 AGIRRTKKSPIKRA-SVGGVKKRFSTGTAGPSRRPTAQPRRQSGGIRTVDRSIPANENRE 71
Query: 454 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR 570
++ +SNL V D+++LF+EF I ++ SV+++ G+
Sbjct: 72 VRINLSNLAHTVHSGDLRQLFAEFKI-RNVSVNFNEHGK 109
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.50
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Frame = +1
Query: 223 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRG--------RNRGGITKSTNYSR-GDVNS 375
GG ++ ++N GGG G NR GG +RG N GG R G +
Sbjct: 35 GGDEKRGNSNNAARSGGGGG--GNR-GGAERGIAPAQQPYDNNGGHRSGGGGGRSGGGGT 91
Query: 376 TWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG 528
++ F + + + TG +L V NL V ++++KELFS G
Sbjct: 92 SFNGAAFTE--SQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHG 140
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.3 bits (70), Expect = 0.50
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Frame = +1
Query: 223 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRG--------RNRGGITKSTNYSR-GDVNS 375
GG ++ ++N GGG G NR GG +RG N GG R G +
Sbjct: 35 GGDEKRGNSNNAARSGGGGG--GNR-GGAERGIAPAQQPYDNNGGHRSGGGGGRSGGGGT 91
Query: 376 TWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG 528
++ F + + + TG +L V NL V ++++KELFS G
Sbjct: 92 SFNGAAFTE--SQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHG 140
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.3 bits (70), Expect = 0.50
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Frame = +1
Query: 223 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRG--------RNRGGITKSTNYSR-GDVNS 375
GG ++ ++N GGG G NR GG +RG N GG R G +
Sbjct: 35 GGDEKRGNSNNAARSGGGGG--GNR-GGAERGIAPAQQPYDNNGGHRSGGGGGRSGGGGT 91
Query: 376 TWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFG 528
++ F + + + TG +L V NL V ++++KELFS G
Sbjct: 92 SFNGAAFTE--SQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHG 140
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 184 DDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
+D A+ K G G ++ + K G GGG G R R G RG RGG
Sbjct: 233 EDTTPAHLKNGSGDGEEKEDEEKKEGGEGGGRGGRGGRGGF--RGGFRGG 280
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 184 DDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
+D A+ K G G ++ + K G GGG G R R G RG RGG
Sbjct: 233 EDTTPAHLKNGSGDGEEKEDEEKKEGGEGGGRGGRGGRGGF--RGGFRGG 280
>Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical
protein ZK856.9 protein.
Length = 455
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGG--AGFRSNRSGGVQRGRNRGGITKSTN 351
GGG KR G+ GG GF+ R G G RGG T+
Sbjct: 387 GGGGSNHNIFRKRPGQDGGQDGGFKRGRGGNFHGGSRRGGYQNRTH 432
>Z68507-6|CAA92829.1| 240|Caenorhabditis elegans Hypothetical
protein M18.7a protein.
Length = 240
Score = 31.5 bits (68), Expect = 0.88
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 301 GGVQRGRNRG-GITKSTNYSRGDVNSTWKH-DMFNDFGERKLQRNSGTITTGPTKLLVSN 474
GG +RG R G+ + + S G WK D + G +S I ++ +SN
Sbjct: 31 GGARRGNTRPTGLPRRSGGSGG-----WKDLDAVQNHGISSRGNDSKVI-----RVNISN 80
Query: 475 LDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL 576
L V SD++ELF ++ L S SV+++ G SL
Sbjct: 81 LAPTVISSDLEELFGDYR-LSSVSVNFNEHGDSL 113
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 31.5 bits (68), Expect = 0.88
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 590 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIG 730
V + DA +A ++NG ++GR + + LAT ++ + + +G
Sbjct: 26 VTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKAKPLMSVG 72
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.88
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 590 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIG 730
V + DA +A ++NG ++GR + + LAT ++ + + +G
Sbjct: 144 VTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKAKPLMSVG 190
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 430 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 567
S + T GP +L VSN+ F + D+ +F + G + + ++ G
Sbjct: 92 SSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG 137
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.5 bits (68), Expect = 0.88
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGG-VQRGRNRG 330
GGG GR R G GGG G R GG GR RG
Sbjct: 99 GGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +1
Query: 223 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
GG GR GRGGG G R GG G RGG
Sbjct: 90 GGGGRGGGGGGGGGRGGGGGGRGGGGGG---GGGRGG 123
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +1
Query: 214 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
R GGG G GRGGG G R GG G RGG
Sbjct: 94 RGGGGGGGGGRGGGGGGRGGGGGGGGGRGGG---GGGRGG 130
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
GGG G G GGG R GG G RGG
Sbjct: 69 GGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG 106
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
GGG G G GGG GF N GG+ GG
Sbjct: 75 GGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGG 112
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
GGG G G GGG GF N GG+ GG
Sbjct: 100 GGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGG 137
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.88
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 590 VVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRPEARNRIG 730
V + DA +A ++NG ++GR + + LAT ++ + + +G
Sbjct: 144 VTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKAKPLMSVG 190
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 430 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSG 567
S + T GP +L VSN+ F + D+ +F + G + + ++ G
Sbjct: 92 SSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG 137
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 226 GAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 330
GAG + GRGGGA + R GG Q GR G
Sbjct: 522 GAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGG 556
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSG--GVQRGRNRGGITKSTNYSRGDVNSTWKHDM 393
GG GR A+ GRGG G++ R G G Q R+ G K + N++ +H
Sbjct: 530 GGAGGRGGGAHGGAGRGG--GYQGGRGGGRGFQNPRDLFGPPKGEEEQQQQANASMQHGY 587
Query: 394 FNDF 405
++ +
Sbjct: 588 YDHY 591
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 226 GAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 330
GAG + GRGGGA + R GG Q GR G
Sbjct: 522 GAGGEAPGGGAGGRGGGAHGGAGRGGGYQGGRGGG 556
Score = 31.5 bits (68), Expect = 0.88
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSG--GVQRGRNRGGITKSTNYSRGDVNSTWKHDM 393
GG GR A+ GRGG G++ R G G Q R+ G K + N++ +H
Sbjct: 530 GGAGGRGGGAHGGAGRGG--GYQGGRGGGRGFQNPRDLFGPPKGEEEQQQQANASMQHGY 587
Query: 394 FNDF 405
++ +
Sbjct: 588 YDHY 591
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 433 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRS 564
G+ T TK+ V L + SD + E F +FG ++ A V DR+
Sbjct: 28 GSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRN 71
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 256 RTGRGGGAGFRSNRSGGVQRGRNRG 330
R GRGGG+GF GG RG +RG
Sbjct: 15 RGGRGGGSGFTPRGGGGGFRGGDRG 39
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRS---NRSGGVQRGRNRGGITKSTNYSRGD 366
GG G + + T RGGG GFR RS G RG +RG S+ + GD
Sbjct: 12 GGFRGGRGGGSGFTPRGGGGGFRGGDRGRSPGGFRGGDRG--RSSSGFRGGD 61
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 214 RIGGGAGRKFDANKRTG--RGGGAGFRSNRSGGVQRGRNRGG 333
R GGG R D + G RGG G S+ G RGR+ GG
Sbjct: 27 RGGGGGFRGGDRGRSPGGFRGGDRGRSSSGFRGGDRGRSPGG 68
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 31.5 bits (68), Expect = 0.88
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 199 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSG-GVQRGRNR 327
A K R GGG G + R GRGG G R R G G +RG R
Sbjct: 322 ARKNQRQGGGRGGRGGRGGRGGRGGRGG-RGGRGGRGDRRGDKR 364
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 223 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFND 402
GG+G+ N ++G G G G ++N +GG G+++ G K + D + T N
Sbjct: 672 GGSGKGGAGNGKSGDGSGDG-KNNGNGGTGDGKDKNG--KGSGSGDNDKSGTRAAGKGNA 728
Query: 403 FGERKLQRNSG 435
G K N G
Sbjct: 729 EGNGKGNGNDG 739
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRG-GGAGFRSNRSG-GVQRGRNRG 330
G G G++ D NK G G GGAG + +SG G G+N G
Sbjct: 659 GSGNGKEGDGNKSGGSGKGGAG--NGKSGDGSGDGKNNG 695
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 223 GGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFND 402
GG+G+ N ++G G G G ++N +GG G+++ G K + D + T N
Sbjct: 672 GGSGKGGAGNGKSGDGSGDG-KNNGNGGTGDGKDKNG--KGSGSGDNDKSGTRAAGKGNA 728
Query: 403 FGERKLQRNSG 435
G K N G
Sbjct: 729 EGNGKGNGNDG 739
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRG-GGAGFRSNRSG-GVQRGRNRG 330
G G G++ D NK G G GGAG + +SG G G+N G
Sbjct: 659 GSGNGKEGDGNKSGGSGKGGAG--NGKSGDGSGDGKNNG 695
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 442 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS 540
T +K+ V N+ F +D ++K LFS+FG + S
Sbjct: 679 TLEKSKVFVRNVHFQATDDELKALFSKFGTVTS 711
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 223 GGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 333
GG G D + G GG G G N+ GG RG N+GG
Sbjct: 168 GGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGG 206
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 220 GGGAGRK-FDANKRTGRGGGAGFRSNRS--GGVQRGRNRGG 333
GGG GR + R GRGG G R R GG RG RGG
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRG-GRGG 711
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 220 GGGAGRK-FDANKRTGRGGGAGFRSNRS--GGVQRGRNRGG 333
GGG GR + R GRGG G R R GG RG RGG
Sbjct: 713 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRG-GRGG 752
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 163 DQIEMALDDII--KANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
D I D+++ K K+ GG G G GGG GF N GG+ GG
Sbjct: 100 DLIGGIFDNVVNRKGKKEQDNYGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGG 158
>AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical
protein F53C3.6a protein.
Length = 250
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/36 (52%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 232 GRKFDANKRTGRGGGAGFR--SNRSGGVQRGRNRGG 333
GR DA GRGGG G R S GGV GR GG
Sbjct: 16 GRNLDARGGRGRGGGGGGRGSSGARGGV-GGRGGGG 50
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 220 GGGAGRK-FDANKRTGRGGGAGFRSNRS--GGVQRGRNRGG 333
GGG GR + R GRGG G R R GG RG RGG
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRG-GRGG 711
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 457 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
KL + L ++ +++E+F++FG ++ SV D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 457 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
KL + L ++ +++E+F++FG ++ SV D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 457 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
KL + L ++ +++E+F++FG ++ SV D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 457 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
KL + L ++ +++E+F++FG ++ SV D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 457 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
KL + L ++ +++E+F++FG ++ SV D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 457 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
KL + L ++ +++E+F++FG ++ SV D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 457 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRS 573
KL + L ++ +++E+F++FG ++ SV D+ G+S
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKS 181
>AL021173-1|CAE17951.1| 89|Caenorhabditis elegans Hypothetical
protein VK10D6R.1 protein.
Length = 89
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 330
GGG G + N G GG G+R N GG+ RG G
Sbjct: 43 GGGYGYRPYGNGGYGSYGGYGYRPNPVGGMLRGALMG 79
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGG--AGFRSNRSGGVQRGRNRGG 333
GGG + R GGG GFR R GG RG RGG
Sbjct: 31 GGGGRGGYGGGDRGSFGGGDRGGFRGGRGGG-DRGGFRGG 69
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 268 GGGAGFRSNRSGGVQRGRNRGG 333
GGG GFR R G RG +RGG
Sbjct: 10 GGGGGFRGGRGG--DRGGSRGG 29
>Z75552-4|CAA99942.1| 624|Caenorhabditis elegans Hypothetical
protein W04D2.4 protein.
Length = 624
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRN 324
GG R +KR GRG G NRSG V +N
Sbjct: 122 GGAHFRHKSGSKRRGRGKGIFLACNRSGNVSSDKN 156
>Z69787-12|CAM84810.1| 234|Caenorhabditis elegans Hypothetical
protein C44C10.9b protein.
Length = 234
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
Frame = +1
Query: 232 GRKFDANKRTGR-----GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 390
GRK++ R G G G RSGG G R S NY R N+ + D
Sbjct: 142 GRKYETGSRNGGYKNGYGNGRNLDVERSGGPDDGYRRREYAVSQNYLRRPSNNVYDSD 199
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 364 DVNSTWKHDMFNDFGERKLQRNSGTITTGPTKL--LVSNLDFGVSDSDIKELFSEFGILK 537
D N K D R LQ+++ + L V N+ +++ ++ +FS+FG +
Sbjct: 111 DENKEGKRDRTKQRENRTLQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTIS 170
Query: 538 S 540
S
Sbjct: 171 S 171
>Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical
protein F59B2.11 protein.
Length = 590
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/84 (29%), Positives = 35/84 (41%)
Frame = +1
Query: 199 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
A K TR+ G + + N R GG G R R G R +N S N S G +
Sbjct: 89 AVKYTRLNDYRGDQVNGNTRKESSGGRGGRGGR-GRRPRPQNSESGEDSDNRSGGRRGQS 147
Query: 379 WKHDMFNDFGERKLQRNSGTITTG 450
+++ + E + RN IT G
Sbjct: 148 NQYE-DEETNEERYDRNGNRITRG 170
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGF-RSNRSGGVQRGRNRGGITKSTNYSR 360
GGG GR D G GGG G+ GG G GG +S + R
Sbjct: 235 GGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGGRRRSRSRDR 282
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 448 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 558
GPT +LV NL + + I+++F FG ++ + D
Sbjct: 125 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD 161
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 448 GPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 558
GPT +LV NL + + I+++F FG ++ + D
Sbjct: 270 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD 306
>Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical
protein Y41E3.8 protein.
Length = 110
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 268 GGGAGFRSNRSGGVQRGRNRGGITKST 348
GGG +R N GG GRN GG+ S+
Sbjct: 66 GGGNAYRRNGGGGGGGGRNIGGLPTSS 92
>Z81463-1|CAB03850.1| 342|Caenorhabditis elegans Hypothetical
protein C06B8.1 protein.
Length = 342
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/68 (23%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +1
Query: 310 QRGRNRGGITKSTNYSRGDVNSTWKH--DMFNDFGERKLQRNSGTITTGPTKLL-VSNLD 480
++G R + ST+ S GD++STWK ++F+ GE +++ + + K + + ++
Sbjct: 122 KKGTKRNALIVSTS-SAGDMDSTWKMVINLFSSLGELEIKDKTALLRNFMPKFIQIDSVP 180
Query: 481 FGVSDSDI 504
+ ++ D+
Sbjct: 181 YFAANIDV 188
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G+G +G GG GF S +GG G G T + G+ T
Sbjct: 107 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGLGSGNAG---GTGFGSGNAGGT 156
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGIT 339
G G+G +G GG GF S ++GG G + G T
Sbjct: 147 GFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGT 186
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRG--GGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G G + R G G GG GF S +GG G G T + G+ T
Sbjct: 55 GSGFGGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGNAGGT 106
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G+G +G GG GF S +GG G G T + G+ T
Sbjct: 77 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGNAGGT 126
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 202 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 330
N ++ GGG F G G G+G SN G G++RG
Sbjct: 211 NHESGFGGGKSGGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRG 253
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G+G +G GG GF S +GG G G T + G T
Sbjct: 127 GFGSGNAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGKAGGT 176
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRN 324
G G+G +G+ GG GF S ++GG G N
Sbjct: 157 GFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGN 191
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G+G +G GG GF S +GG G G T + G+ T
Sbjct: 107 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGLGSGNAG---GTGFGSGNAGGT 156
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGIT 339
G G+G +G GG GF S ++GG G + G T
Sbjct: 147 GFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGT 186
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRG--GGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G G + R G G GG GF S +GG G G T + G+ T
Sbjct: 55 GSGFGGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGNAGGT 106
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G+G +G GG GF S +GG G G T + G+ T
Sbjct: 77 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGNAGGT 126
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 202 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 330
N ++ GGG F G G G+G SN G G++RG
Sbjct: 211 NHESGFGGGKSGGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRG 253
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G+G +G GG GF S +GG G G T + G T
Sbjct: 127 GFGSGNAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGKAGGT 176
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRN 324
G G+G +G+ GG GF S ++GG G N
Sbjct: 157 GFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGN 191
>AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical
protein M01G5.1 protein.
Length = 889
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +1
Query: 235 RKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNS 375
RKF + GR GG G R GG RGR R G ++ G NS
Sbjct: 835 RKFYPPRVRGRRGGRGRSGGRGGG--RGRERDGGSRGRGGRGGRGNS 879
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
GGG GR D+ G GGAG S GG G GG
Sbjct: 339 GGGGGRA-DSGGAAGGAGGAGGYSGGGGGGGGGAAAGG 375
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
GG AG A +G GGG G + GG G GG
Sbjct: 348 GGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGGGGGG 385
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = +1
Query: 214 RIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTW 381
R GG+G N G GG G RS GG Q G GG + R W
Sbjct: 588 RYQGGSGNGGGGNGGGGGFGGGGQRSGGGGGFQSG--GGGGRQQQQQQRAQPQQDW 641
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGIT 339
G G+G +G GG GF S ++GG G + G T
Sbjct: 147 GFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGT 186
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRG--GGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G G + R G G GG GF S +GG G G T + G+ T
Sbjct: 55 GSGFGGNNNVGPRFGNGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGNAGGT 106
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 202 NKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 330
N ++ GGG F G G G+G SN G G++RG
Sbjct: 211 NHESGFGGGKSGGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRG 253
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G+G +G GG GF S +GG G G T + G+ T
Sbjct: 77 GFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGGGNAGGT 126
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G+G +G GG GF S +GG G G T + G T
Sbjct: 127 GFGSGNAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAG---GTGFGSGKAGGT 176
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRN 324
G G+G +G+ GG GF S ++GG G N
Sbjct: 157 GFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGN 191
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNST 378
G G+G G GG GF S +GG G G T + G+ T
Sbjct: 107 GFGSGNAGGTGFGGGNAGGTGFGSGNAGGTGLGSGNAG---GTGFGSGNAGGT 156
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 460 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLXY 582
L V L+ +D D++ +FS FG + + + D RSG SL Y
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQY 284
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 460 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLXY 582
L V L+ +D D++ +FS FG + + + D RSG SL Y
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQY 284
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 460 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLXY 582
L V L+ +D D++ +FS FG + + + D RSG SL Y
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQY 215
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 584 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLRP 709
A V FE DA KA+ +G ++ QLA +E+ + RP
Sbjct: 66 AYVTFETPEDAQKAINLVDGYDYKKFILSAQLAATEVKSFRP 107
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 841 TTTSFXVSPTCSTIALISNSSTS-SFRIVSYSTPHTRTTNSISSLGP 704
TTTS S ST +++STS S + ST T TT+S SS P
Sbjct: 520 TTTSSTTSTEASTPTTSTSTSTSTSTPSTTTSTTSTSTTSSTSSSAP 566
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein
T07D4.3 protein.
Length = 1301
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 262 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYS 357
G GGG G+R R G RG RGG + N S
Sbjct: 1271 GAGGGGGYRGGRGG---RGGGRGGGGRGWNAS 1299
>Z34533-2|CAA84296.1| 166|Caenorhabditis elegans Hypothetical
protein B0285.3 protein.
Length = 166
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 241 FDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITK 342
F N R G GGG G ++N RGR RGG +
Sbjct: 72 FRGNYRGGGGGGGGNQNNYGN---RGRGRGGFDR 102
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 184 DDIIKANKKTRIGGGAGRK--FDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYS 357
+D ++A +RI G R +R G G G GF GG R RG +S + S
Sbjct: 53 EDAVRALDGSRICGVRARVELSTGQRRGGGGRGGGFGGRGGGGRDRSPYRGDRGRSRSRS 112
Query: 358 R 360
R
Sbjct: 113 R 113
>AF067211-9|AAC16994.1| 120|Caenorhabditis elegans Hypothetical
protein B0205.8 protein.
Length = 120
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGG----GAGFRSNRSGGVQ-RGRNRGG 333
GGG G + + RGG G G R GG Q RG +RGG
Sbjct: 54 GGGRGGGYQHRDNSNRGGWVPRGGGQRGGYRGGWQDRGGHRGG 96
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 454 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRS 564
T + VSN+ V++ D+ F FG L + + Y RS
Sbjct: 200 TNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRS 236
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 330
G GR + +GRGGG G S GG G RG
Sbjct: 828 GSYRGRSSGGSGGSGRGGGRGGYSRGHGGGSGGGQRG 864
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 330
G GR + +GRGGG G S GG G RG
Sbjct: 825 GSYRGRSSGGSGGSGRGGGRGGYSRGHGGGSGGGQRG 861
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 584 ADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 682
A V F +A A +A++Q NGV +GR + + A
Sbjct: 50 AFVEFSEEAGAQRAVEQLNGVAFNGRNLRVNYA 82
>Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical
protein C16C10.3 protein.
Length = 1032
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 199 ANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ-RG--RNRGGITKSTNYSRG 363
+NK + + GG G + + R G+R RS RG NRGG + + SRG
Sbjct: 296 SNKLSEMKGGGGGRGGYGRSDSRDSRGGYRGGRSDSRDFRGVYGNRGGNDRYRDESRG 353
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +1
Query: 220 GGGAGRK--FDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
GGG G FD N GRGG G R G G RGG
Sbjct: 99 GGGRGGNGGFDDNGG-GRGGNGGGRGGTGGFGDNGGGRGG 137
>U20864-9|AAC46661.1| 123|Caenorhabditis elegans Lsm sm-like
protein protein 4 protein.
Length = 123
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +1
Query: 235 RKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 333
R+ + GRGGG G R GG G NRGG
Sbjct: 89 RQQQREQSRGRGGGRGGRGGHRGG---GGNRGG 118
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +1
Query: 214 RIGGGAGRKFDAN----KRTGRGGGAGFRSNRSGGVQRGRNRGG 333
R GGG G + N +R G GGG G+ + G G GG
Sbjct: 767 RGGGGGGGGYRGNSYDDRRGGGGGGGGYNDRQDFGRNYGGRDGG 810
>AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical
protein Y46G5A.23 protein.
Length = 108
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +1
Query: 220 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRG 318
GGG GR+ R G GGG +R GG RG
Sbjct: 68 GGGGGRRHHRGHRHG-GGGHRHGGHRGGGGGRG 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,793,965
Number of Sequences: 27780
Number of extensions: 391132
Number of successful extensions: 2023
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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