Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_L07
         (938 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   4.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   6.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   6.0  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 361 YINLCVKLTKPSKMT 405
           Y  +CVKL  P K+T
Sbjct: 330 YPEVCVKLANPQKLT 344


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 254 RTGPFTFLMI*RLVS 210
           RTG FTFLM+  ++S
Sbjct: 76  RTGSFTFLMVVAVLS 90


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 254 RTGPFTFLMI*RLVS 210
           RTG FTFLM+  ++S
Sbjct: 76  RTGSFTFLMVVAVLS 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,167
Number of Sequences: 336
Number of extensions: 2119
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26375415
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)