Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_L06
(1142 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.035
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 35 0.11
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 32 0.99
SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 31 2.3
SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 5.3
SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 7.0
SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6) 29 7.0
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 29 7.0
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 7.0
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 9.2
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 9.2
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.2
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 36.7 bits (81), Expect = 0.035
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 617 FFXXXXPPPPPPXXXFFFFYXLXXPPPPPPXK 522
F+ PPPPPP F+ Y PPPPPP +
Sbjct: 58 FYDNDIPPPPPPRRGFYDDY---PPPPPPPRR 86
Score = 36.3 bits (80), Expect = 0.046
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPPP FY PPPPPP + F P
Sbjct: 50 PPPPPPPR----FYDNDIPPPPPPRRGFYDDYPP 79
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPPXXXF 736
PPPP PPPPPP F
Sbjct: 50 PPPPPPPRFYDNDIPPPPPPRRGF 73
Score = 29.9 bits (64), Expect = 4.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 65 PPPPPRRGFYDDYPPPPPPP 84
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPPP PPPPPP L G P
Sbjct: 677 PPPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLP 710
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPPP L PPPPPP G P
Sbjct: 694 PPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPP 727
Score = 28.7 bits (61), Expect = 9.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP PPPPPP
Sbjct: 700 PPPPLLSGTLPMPPPPPPPP 719
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPPP F PPPPP F P
Sbjct: 282 PPPPPPSNTPGMFASSGFQPPPPPPTDFAPPPPP 315
>SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +3
Query: 831 FXSXPXXXXKXKKKKKKKKXXXXXXXXXXXXXXXXKKKKKXXKK 962
F P K KKKKKKKK KKKKK KK
Sbjct: 143 FPQPPTKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 186
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/37 (48%), Positives = 18/37 (48%)
Frame = +3
Query: 777 KKKKKKKKKXXXXXXXFXFXSXPXXXXKXKKKKKKKK 887
KKKKKKKKK K KKKKKKKK
Sbjct: 149 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 185
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 831 FXSXPXXXXKXKKKKKKKKXXXXXXXXXXXXXXXXKKKKKXXKK 962
+ + P K KKKKKKKK KKKKK KK
Sbjct: 140 YQAFPQPPTKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 183
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = +2
Query: 779 KKKKKKKKXXXXXXXXXFFXXXXXXXKXKKKKKKKK 886
KKKKKKKK K KKKKKKKK
Sbjct: 152 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 187
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = +2
Query: 779 KKKKKKKKXXXXXXXXXFFXXXXXXXKXKKKKKKKK 886
KKKKKKKK K KKKKKKKK
Sbjct: 153 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 188
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = +2
Query: 779 KKKKKKKKXXXXXXXXXFFXXXXXXXKXKKKKKKKK 886
KKKKKKKK K KKKKKKKK
Sbjct: 154 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 189
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = +2
Query: 779 KKKKKKKKXXXXXXXXXFFXXXXXXXKXKKKKKKKK 886
KKKKKKKK K KKKKKKKK
Sbjct: 155 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 190
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP L PPPPPP
Sbjct: 374 PPPPPPPIEGRPPSSLGNPPPPPP 397
>SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 504
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP + PPPPP
Sbjct: 5 PPPPPPPPPIAAEFTAPPAPPPPP 28
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP F PPPP P
Sbjct: 7 PPPPPPPIAAEFTAPPAPPPPPNP 30
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPP---PXKXFLXGXXP 498
PPPPPP F PPPPP P L G P
Sbjct: 195 PPPPPPPPPPGFPGGAPPPPPPPFGAPPPPALNGGPP 231
Score = 28.7 bits (61), Expect = 9.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP PPPPPP
Sbjct: 198 PPPPPPPGFPGGAPPPPPPP 217
>SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXK 522
PPPPPP + PPPPP K
Sbjct: 210 PPPPPPPPEDDSIHNHEDLPPPPPPK 235
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP F PPPPPP
Sbjct: 479 PPPPPPPPPF--------PPPPPP 494
Score = 28.7 bits (61), Expect = 9.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPPXXXF 736
PPPP PPPPPP F
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPF 488
>SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6)
Length = 479
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP L PPPPPP
Sbjct: 424 PPPPPPPAP------LPPPPPPPP 441
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP PPPPPP
Sbjct: 1160 PPPPPPPPPSSPSPPPPPPPPPPP 1183
Score = 28.7 bits (61), Expect = 9.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP PPPPPP
Sbjct: 1159 PPPPPPPPPPSSPSPPPPPPPPPP 1182
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP F+ P P PP
Sbjct: 335 PPPPPPPSEDFYSMPSSLPMPSPP 358
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPPP PPPPPP G P
Sbjct: 138 PPPPPPIAP-----ATGGPPPPPPIAPATGGPPP 166
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.7 bits (61), Expect = 9.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 357 PPPPPGRAPQPLGGPPPPPP 376
Score = 28.7 bits (61), Expect = 9.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 373 PPPPGRRPPSGKINPPPPPP 392
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.7 bits (61), Expect = 9.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 269 PPPPPGRAPQPLGGPPPPPP 288
Score = 28.7 bits (61), Expect = 9.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 285 PPPPGRRPPSGKINPPPPPP 304
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 28.7 bits (61), Expect = 9.2
Identities = 19/61 (31%), Positives = 23/61 (37%)
Frame = +3
Query: 780 KKKKKKKKXXXXXXXFXFXSXPXXXXKXKKKKKKKKXXXXXXXXXXXXXXXXKKKKKXXK 959
K +KKK+K + P K KK KKK K KKKKK K
Sbjct: 489 KSEKKKRKRTSDNESEKEETTPSKLKKSKKDKKKAKEATEEDDGEEKKEKKKKKKKKKGK 548
Query: 960 K 962
+
Sbjct: 549 E 549
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,838,103
Number of Sequences: 59808
Number of extensions: 299251
Number of successful extensions: 4020
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3521645721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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