SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_L06
         (1142 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U87166-1|AAC39757.1|  508|Homo sapiens spectrin SH3 domain bindi...    35   0.48 
AF540955-1|AAN28379.1|  476|Homo sapiens Abl-interactor 1 protein.     35   0.48 
BC024254-1|AAH24254.1|  476|Homo sapiens abl-interactor 1 protein.     34   0.84 
AL390961-8|CAI17279.1|  451|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL390961-7|CAI17275.1|  508|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL390961-6|CAI17278.1|  452|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL390961-5|CAI17276.1|  481|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL390961-4|CAI17274.1|  476|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL390961-3|CAI17272.1|  446|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL390961-2|CAI17273.1|  475|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL390961-1|CAI17277.1|  480|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL139404-8|CAH73117.1|  451|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL139404-7|CAH73112.1|  508|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL139404-6|CAH73116.1|  452|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL139404-5|CAH73113.1|  481|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL139404-4|CAH73115.1|  476|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL139404-3|CAH73118.1|  446|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL139404-2|CAH73119.1|  475|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AL139404-1|CAH73114.1|  480|Homo sapiens spectrin SH3 domain bin...    34   0.84 
AJ277065-1|CAB88006.1|  508|Homo sapiens spectrin SH3 binding pr...    34   0.84 
AF260262-1|AAF70309.1|  446|Homo sapiens Abl-interactor protein ...    34   0.84 
AF006516-1|AAB62569.1|  480|Homo sapiens e3B1 protein.                 34   0.84 
AF001628-1|AAD00897.1|  451|Homo sapiens interactor protein AblB...    34   0.84 
AB209268-1|BAD92505.1|  476|Homo sapiens Abl-interactor 1 varian...    34   0.84 
AB040151-1|BAB55675.1|  452|Homo sapiens hNap1 Binding Protein p...    34   0.84 
BC110828-1|AAI10829.1|  390|Homo sapiens RUNX1 protein protein.        33   2.6  
BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          33   2.6  
AK125805-1|BAC86300.1|  148|Homo sapiens protein ( Homo sapiens ...    26   3.0  
Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.        32   3.4  
L49380-1|AAB04033.1|  639|Homo sapiens transcription factor ZFM1...    32   3.4  
BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger ...    32   3.4  
BC026291-1|AAH26291.1|  440|Homo sapiens SLC22A12 protein protein.     32   4.5  
BX537702-1|CAD97815.1|  479|Homo sapiens hypothetical protein pr...    31   5.9  
BC048271-1|AAH48271.1|  611|Homo sapiens ZC3H11A protein protein.      31   5.9  
BC043583-1|AAH43583.1|  784|Homo sapiens DNAJC13 protein protein.      31   5.9  
BC031825-1|AAH31825.1|  560|Homo sapiens TAOK2 protein protein.        31   5.9  
BC030973-1|AAH30973.1|  392|Homo sapiens UBE4A protein protein.        31   5.9  
BC007291-1|AAH07291.1|  767|Homo sapiens SHROOM3 protein protein.      31   5.9  
AB055660-1|BAB84689.1| 1995|Homo sapiens Shroom-related protein ...    31   5.9  
AB040914-1|BAA96005.1| 1380|Homo sapiens KIAA1481 protein protein.     31   5.9  

>U87166-1|AAC39757.1|  508|Homo sapiens spectrin SH3 domain binding
           protein 1 protein.
          Length = 508

 Score = 35.1 bits (77), Expect = 0.48
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 395 PPPPPPPDDIPMFDDFPPPPPPPP 418


>AF540955-1|AAN28379.1|  476|Homo sapiens Abl-interactor 1 protein.
          Length = 476

 Score = 35.1 bits (77), Expect = 0.48
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 363 PPPPPPPDDIPMFDDFPPPPPPPP 386


>BC024254-1|AAH24254.1|  476|Homo sapiens abl-interactor 1 protein.
          Length = 476

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 363 PPPPPPPDDIPMFDDSPPPPPPPP 386


>AL390961-8|CAI17279.1|  451|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 451

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 338 PPPPPPPDDIPMFDDSPPPPPPPP 361


>AL390961-7|CAI17275.1|  508|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 508

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 395 PPPPPPPDDIPMFDDSPPPPPPPP 418


>AL390961-6|CAI17278.1|  452|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 452

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 339 PPPPPPPDDIPMFDDSPPPPPPPP 362


>AL390961-5|CAI17276.1|  481|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 481

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 368 PPPPPPPDDIPMFDDSPPPPPPPP 391


>AL390961-4|CAI17274.1|  476|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 476

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 363 PPPPPPPDDIPMFDDSPPPPPPPP 386


>AL390961-3|CAI17272.1|  446|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 446

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 333 PPPPPPPDDIPMFDDSPPPPPPPP 356


>AL390961-2|CAI17273.1|  475|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 475

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 362 PPPPPPPDDIPMFDDSPPPPPPPP 385


>AL390961-1|CAI17277.1|  480|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 480

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 367 PPPPPPPDDIPMFDDSPPPPPPPP 390


>AL139404-8|CAH73117.1|  451|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 451

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 338 PPPPPPPDDIPMFDDSPPPPPPPP 361


>AL139404-7|CAH73112.1|  508|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 508

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 395 PPPPPPPDDIPMFDDSPPPPPPPP 418


>AL139404-6|CAH73116.1|  452|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 452

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 339 PPPPPPPDDIPMFDDSPPPPPPPP 362


>AL139404-5|CAH73113.1|  481|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 481

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 368 PPPPPPPDDIPMFDDSPPPPPPPP 391


>AL139404-4|CAH73115.1|  476|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 476

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 363 PPPPPPPDDIPMFDDSPPPPPPPP 386


>AL139404-3|CAH73118.1|  446|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 446

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 333 PPPPPPPDDIPMFDDSPPPPPPPP 356


>AL139404-2|CAH73119.1|  475|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 475

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 362 PPPPPPPDDIPMFDDSPPPPPPPP 385


>AL139404-1|CAH73114.1|  480|Homo sapiens spectrin SH3 domain
           binding protein 1 protein.
          Length = 480

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 367 PPPPPPPDDIPMFDDSPPPPPPPP 390


>AJ277065-1|CAB88006.1|  508|Homo sapiens spectrin SH3 binding
           protein protein.
          Length = 508

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 395 PPPPPPPDDIPMFDDSPPPPPPPP 418


>AF260262-1|AAF70309.1|  446|Homo sapiens Abl-interactor protein 1
           long protein.
          Length = 446

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 333 PPPPPPPDDIPMFDDSPPPPPPPP 356


>AF006516-1|AAB62569.1|  480|Homo sapiens e3B1 protein.
          Length = 480

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 367 PPPPPPPDDIPMFDDSPPPPPPPP 390


>AF001628-1|AAD00897.1|  451|Homo sapiens interactor protein AblBP4
           protein.
          Length = 451

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 338 PPPPPPPDDIPMFDDSPPPPPPPP 361


>AB209268-1|BAD92505.1|  476|Homo sapiens Abl-interactor 1 variant
           protein.
          Length = 476

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 363 PPPPPPPDDIPMFDDSPPPPPPPP 386


>AB040151-1|BAB55675.1|  452|Homo sapiens hNap1 Binding Protein
           protein.
          Length = 452

 Score = 34.3 bits (75), Expect = 0.84
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP      F     PPPPPP
Sbjct: 339 PPPPPPPDDIPMFDDSPPPPPPPP 362


>BC110828-1|AAI10829.1|  390|Homo sapiens RUNX1 protein protein.
          Length = 390

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 25/62 (40%), Positives = 25/62 (40%)
 Frame = +3

Query: 777 KKKKKKKKKXXXXXXXFXFXSXPXXXXKXKKKKKKKKXXXXXXXXXXXXXXXXKKKKKXX 956
           KKKKKKKKK                  K KKKKKKKK                KKKKK  
Sbjct: 338 KKKKKKKKKK---------KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 388

Query: 957 KK 962
           KK
Sbjct: 389 KK 390



 Score = 31.9 bits (69), Expect = 4.5
 Identities = 19/46 (41%), Positives = 19/46 (41%)
 Frame = +3

Query: 825 FXFXSXPXXXXKXKKKKKKKKXXXXXXXXXXXXXXXXKKKKKXXKK 962
           F F S      K KKKKKKKK                KKKKK  KK
Sbjct: 327 FLFLSNKMLTCKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 372


>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP       Y    PPPPPP
Sbjct: 83  PPPPPPPPSPGASYPPPQPPPPPP 106



 Score = 31.1 bits (67), Expect = 7.8
 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 6/30 (20%)
 Frame = -1

Query: 599 PPPPPPXXXF------FFFYXLXXPPPPPP 528
           PPPPPP          F F  L  PPPPPP
Sbjct: 47  PPPPPPVGSMGALTAAFPFAALPPPPPPPP 76


>AK125805-1|BAC86300.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43817 fis, clone TESTI4001665. ).
          Length = 148

 Score = 25.8 bits (54), Expect(2) = 3.0
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 803 FFFFFFFFF 777
           FFFFFFFFF
Sbjct: 22  FFFFFFFFF 30



 Score = 25.4 bits (53), Expect(2) = 3.0
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -1

Query: 887 FFFFFFFFXF 858
           FFFFFFFF F
Sbjct: 20  FFFFFFFFFF 29


>Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.
          Length = 639

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPP 531
           PPPPPP       Y    PPPPP
Sbjct: 584 PPPPPPPGSAGMMYAPPPPPPPP 606


>L49380-1|AAB04033.1|  639|Homo sapiens transcription factor ZFM1
           protein.
          Length = 639

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPP 531
           PPPPPP       Y    PPPPP
Sbjct: 584 PPPPPPPVSAGMMYAPPPPPPPP 606



 Score = 31.5 bits (68), Expect = 5.9
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
           PPPPPP            PPPPPP
Sbjct: 582 PPPPPPPPPVSAGMMYAPPPPPPP 605


>BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger
           protein 162 protein.
          Length = 265

 Score = 32.3 bits (70), Expect = 3.4
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -1

Query: 599 PPPPPPXXXFFFFYXLXXPPPPP 531
           PPPPPP       Y    PPPPP
Sbjct: 210 PPPPPPPGSAGMMYAPPPPPPPP 232


>BC026291-1|AAH26291.1|  440|Homo sapiens SLC22A12 protein protein.
          Length = 440

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 25/62 (40%), Positives = 25/62 (40%)
 Frame = +3

Query: 777 KKKKKKKKKXXXXXXXFXFXSXPXXXXKXKKKKKKKKXXXXXXXXXXXXXXXXKKKKKXX 956
           KKKKKKKKK                  K KKKKKKKK                KKKKK  
Sbjct: 390 KKKKKKKKK-----------KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 438

Query: 957 KK 962
           KK
Sbjct: 439 KK 440


>BX537702-1|CAD97815.1|  479|Homo sapiens hypothetical protein
           protein.
          Length = 479

 Score = 31.5 bits (68), Expect = 5.9
 Identities = 18/37 (48%), Positives = 18/37 (48%)
 Frame = +3

Query: 777 KKKKKKKKKXXXXXXXFXFXSXPXXXXKXKKKKKKKK 887
           KKKKKKKKK                  K KKKKKKKK
Sbjct: 441 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 477


>BC048271-1|AAH48271.1|  611|Homo sapiens ZC3H11A protein protein.
          Length = 611

 Score = 31.5 bits (68), Expect = 5.9
 Identities = 18/37 (48%), Positives = 18/37 (48%)
 Frame = +3

Query: 777 KKKKKKKKKXXXXXXXFXFXSXPXXXXKXKKKKKKKK 887
           KKKKKKKKK                  K KKKKKKKK
Sbjct: 575 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 611


>BC043583-1|AAH43583.1|  784|Homo sapiens DNAJC13 protein protein.
          Length = 784

 Score = 31.5 bits (68), Expect = 5.9
 Identities = 18/37 (48%), Positives = 18/37 (48%)
 Frame = +3

Query: 777 KKKKKKKKKXXXXXXXFXFXSXPXXXXKXKKKKKKKK 887
           KKKKKKKKK                  K KKKKKKKK
Sbjct: 748 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 784


>BC031825-1|AAH31825.1|  560|Homo sapiens TAOK2 protein protein.
          Length = 560

 Score = 31.5 bits (68), Expect = 5.9
 Identities = 18/37 (48%), Positives = 18/37 (48%)
 Frame = +3

Query: 777 KKKKKKKKKXXXXXXXFXFXSXPXXXXKXKKKKKKKK 887
           KKKKKKKKK                  K KKKKKKKK
Sbjct: 523 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 559


>BC030973-1|AAH30973.1|  392|Homo sapiens UBE4A protein protein.
          Length = 392

 Score = 31.5 bits (68), Expect = 5.9
 Identities = 18/37 (48%), Positives = 18/37 (48%)
 Frame = +3

Query: 777 KKKKKKKKKXXXXXXXFXFXSXPXXXXKXKKKKKKKK 887
           KKKKKKKKK                  K KKKKKKKK
Sbjct: 348 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 384


>BC007291-1|AAH07291.1|  767|Homo sapiens SHROOM3 protein protein.
          Length = 767

 Score = 31.5 bits (68), Expect = 5.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 614 FXXXXPPPPPPXXXFFFFYXLXXPPPPPP 528
           F    PPPPPP       Y +   PPPPP
Sbjct: 294 FEPLPPPPPPPPSQETPVYSMDDFPPPPP 322


>AB055660-1|BAB84689.1| 1995|Homo sapiens Shroom-related protein
            protein.
          Length = 1995

 Score = 31.5 bits (68), Expect = 5.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 614  FXXXXPPPPPPXXXFFFFYXLXXPPPPPP 528
            F    PPPPPP       Y +   PPPPP
Sbjct: 1522 FEPLPPPPPPPPSQETPVYSMDDFPPPPP 1550


>AB040914-1|BAA96005.1| 1380|Homo sapiens KIAA1481 protein protein.
          Length = 1380

 Score = 31.5 bits (68), Expect = 5.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 614 FXXXXPPPPPPXXXFFFFYXLXXPPPPPP 528
           F    PPPPPP       Y +   PPPPP
Sbjct: 907 FEPLPPPPPPPPSQETPVYSMDDFPPPPP 935


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,903,419
Number of Sequences: 237096
Number of extensions: 2243605
Number of successful extensions: 36301
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20378
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15976881214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -