Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_L06
(1142 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 35 0.12
Z75543-7|CAA99868.2| 139|Caenorhabditis elegans Hypothetical pr... 34 0.22
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 0.87
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 32 0.87
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.87
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.87
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.2
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 29 1.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 2.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 2.0
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 2.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 2.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 2.0
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 2.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 26 3.0
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 30 3.5
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 30 3.5
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 30 3.5
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 30 3.5
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 3.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 3.5
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 30 3.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.6
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.1
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.1
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.1
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 34.7 bits (76), Expect = 0.12
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPPP PPPPPP L P
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPP 100
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP L PPPPPP
Sbjct: 72 PPPPLISILQQAPPPPPPPP 91
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 71 PPPPPLISILQQAPPPPPPP 90
>Z75543-7|CAA99868.2| 139|Caenorhabditis elegans Hypothetical
protein K01D12.8 protein.
Length = 139
Score = 33.9 bits (74), Expect = 0.22
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 529 GGGGGGXWXX*KKKKXXXGGGGGGXXXKKKKKKKKK 636
GG GGG K K GGGGGG K+ K+ KKK
Sbjct: 68 GGSGGG-----KGGKGGSGGGGGGSGGKRYKRSKKK 98
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 529 GGGGGGXWXX*KKKKXXXGGGGGGXXXKKKKKKKKK 636
G GG G K GGG GG K+ KKK K
Sbjct: 66 GSGGSGGGKGGKGGSGGGGGGSGGKRYKRSKKKDTK 101
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.9 bits (69), Expect = 0.87
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP + PPPPPP
Sbjct: 489 PPPPPPLPPIATPSSVPPPPPPPP 512
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 31.9 bits (69), Expect = 0.87
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +1
Query: 610 KKKKKKKKKXXXXXXXXXPPPPXXKXXXXXKXPPPPPXXXXXXXXXXXXXXXXXXXKKKK 789
K KKKK PPPP K K PPP KK
Sbjct: 36 KPKKKKDVSGAPSAESPPPPPPAPKVPEPPKAPPPADAVKKIEEKGEEKKPEEPAKSKKS 95
Query: 790 KKKKK 804
+KK+K
Sbjct: 96 EKKEK 100
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.87
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP + PPPPPP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPP 519
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.9 bits (69), Expect = 0.87
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP + PPPPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP L PPPPPP
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPP 1363
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPPP PPPPPP F G P
Sbjct: 758 PPPPPPPPG-----GCPPPPPPPPPGGFKGGPPP 786
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXF 516
PPPPPP F PPPPPP F
Sbjct: 769 PPPPPPPPPGGF---KGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPPP PPPPPP F G P
Sbjct: 758 PPPPPPPPG-----GCPPPPPPPPPGGFKGGPPP 786
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXF 516
PPPPPP F PPPPPP F
Sbjct: 769 PPPPPPPPPGGF---KGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPPP PPPPPP F G P
Sbjct: 341 PPPPPPPPG-----GCPPPPPPPPPGGFKGGPPP 369
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXF 516
PPPPPP F PPPPPP F
Sbjct: 352 PPPPPPPPPGGF---KGGPPPPPPPGMF 376
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPPP PPPPPP L G P
Sbjct: 562 PPPPPPLPQNLS----GAPPPPPPPPPMLGGPPP 591
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + L PPPPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPP 583
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPPXKXFLXG 507
PPPPPP L PPPPPP L G
Sbjct: 576 PPPPPPPPPM-----LGGPPPPPPPPGGLMG 601
Score = 29.5 bits (63), Expect = 4.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 577 PPPPPPPPMLGGPPPPPPPP 596
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 28.7 bits (61), Expect(2) = 1.6
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 719 GGGGGXXXXIXIFXXGGGGXXXXXXXXXFFFFFFFFXXXXPPPPPP 582
GGGGG GGGG F PPPPPP
Sbjct: 23 GGGGGCGGGCGGGCGGGGGGGCLPTLGCSVISFNVPTLKLPPPPPP 68
Score = 21.0 bits (42), Expect(2) = 1.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 545 PPPPPP 528
PPPPPP
Sbjct: 64 PPPPPP 69
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 596 PPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPP F PPPPPP + G P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP Y PPPPPP
Sbjct: 334 PPPPPPGMR----YPGGMPPPPPP 353
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXL--XXPPPPPP 528
PPPPPP F + PPPPPP
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPP 635
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP PPPPPP
Sbjct: 633 PPPPPPMGLPAVGAGAPPPPPPPP 656
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP PPPPPP
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPP 655
Score = 24.6 bits (51), Expect(2) = 5.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 593 PPPPXXXFFFFYXLXXPPPPPP 528
PPPP PPPPPP
Sbjct: 558 PPPPTRVESHGLAPARPPPPPP 579
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 545 PPPPPPXKXF 516
PPPPPP + F
Sbjct: 611 PPPPPPPQSF 620
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXL--XXPPPPPP 528
PPPPPP F + PPPPPP
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPP 461
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP PPPPPP
Sbjct: 459 PPPPPPMGLPAVGAGAPPPPPPPP 482
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP PPPPPP
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPP 481
Score = 24.6 bits (51), Expect(2) = 5.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 593 PPPPXXXFFFFYXLXXPPPPPP 528
PPPP PPPPPP
Sbjct: 384 PPPPTRVESHGLAPARPPPPPP 405
Score = 23.0 bits (47), Expect(2) = 5.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 545 PPPPPPXKXF 516
PPPPPP + F
Sbjct: 437 PPPPPPPQSF 446
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 596 PPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXP 498
PPPPP F PPPPPP + G P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP Y PPPPPP
Sbjct: 344 PPPPPPGMR----YPGGMPPPPPP 363
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP PPPPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP PPPPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP K PPPPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPPPP 143
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP PPPPPP
Sbjct: 125 PPPPRKSRAGGSSPPPPPPP 144
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 26.2 bits (55), Expect(2) = 3.0
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPP 721
PPPP + PPPPP
Sbjct: 538 PPPPPPVGMANGGPPPPPP 556
Score = 22.2 bits (45), Expect(2) = 3.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 707 PPPPPPXXXF 736
PPPPPP F
Sbjct: 578 PPPPPPPPSF 587
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP L PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP L PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP L PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP L PPPPPP
Sbjct: 15 PPPPASVVLHPSAPPPPPPP 34
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP L PPPPP
Sbjct: 675 PPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPPP L PPPPP
Sbjct: 675 PPPPPPPMPGDLSSLLAAAPPPPP 698
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
P PPPP F PPPPPP
Sbjct: 56 PVPPPPAYPFAPQVFTQPPPPPPP 79
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 4.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 4.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPP 814
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 599 PPPPPPXXXFFFFYXLXXPPPPPP 528
PPPPP F + PPPPPP
Sbjct: 55 PPPPPCPAQFCPPPPICPPPPPPP 78
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 29.1 bits (62), Expect = 6.1
Identities = 17/64 (26%), Positives = 20/64 (31%)
Frame = +1
Query: 613 KKKKKKKKXXXXXXXXXPPPPXXKXXXXXKXPPPPPXXXXXXXXXXXXXXXXXXXKKKKK 792
KK K + PPPP K K PPP KK +
Sbjct: 38 KKNKPARSVASSAEPPPPPPPAPKVPEPPKAPPPVDDVKKIEEKEVEKKPDEPAKSKKSE 97
Query: 793 KKKK 804
KK+K
Sbjct: 98 KKEK 101
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -1
Query: 596 PPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXPXL 492
PPPPP PPPPPP + P L
Sbjct: 234 PPPPPLPPVGAGAPPPPPPPPPPAQLMASSGTPSL 268
Score = 29.1 bits (62), Expect = 6.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 234 PPPPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -1
Query: 596 PPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXPXL 492
PPPPP PPPPPP + P L
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPPAQLMASSGTPSL 254
Score = 29.1 bits (62), Expect = 6.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -1
Query: 596 PPPPPXXXFFFFYXLXXPPPPPPXKXFLXGXXPXL 492
PPPPP PPPPPP + P L
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPPAQLMASSGTPSL 254
Score = 29.1 bits (62), Expect = 6.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 665 PPPPXXKXLXXXXXPPPPPP 724
PPPP + PPPPPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPP 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,994,784
Number of Sequences: 27780
Number of extensions: 297922
Number of successful extensions: 3863
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2500
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3099034026
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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