Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_L06
         (1142 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   2.1  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.0 bits (42), Expect(2) = 2.1
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 599  PPPPPP 582
            PPPPPP
Sbjct: 1355 PPPPPP 1360



 Score = 21.0 bits (42), Expect(2) = 2.1
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 599  PPPPPP 582
            PPPPPP
Sbjct: 1356 PPPPPP 1361



 Score = 21.0 bits (42), Expect(2) = 2.1
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 545  PPPPPP 528
            PPPPPP
Sbjct: 1356 PPPPPP 1361



 Score = 21.0 bits (42), Expect(2) = 2.1
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 545  PPPPPP 528
            PPPPPP
Sbjct: 1357 PPPPPP 1362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,754
Number of Sequences: 438
Number of extensions: 3979
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 38680821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)