Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_L05
         (1018 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161     93   3e-19
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764...    80   2e-15
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129           79   6e-15
07_01_1001 - 8460467-8460799                                           65   7e-11
07_03_0321 + 16757414-16757743                                         63   3e-10
01_06_0098 - 26416768-26416998                                         32   0.84 
08_02_1093 - 24271826-24273427                                         29   4.5  
06_03_0854 + 25400855-25403741,25406174-25407708                       29   5.9  
12_01_0090 + 717524-719080                                             29   7.9  

>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
          Length = 113

 Score = 93.1 bits (221), Expect = 3e-19
 Identities = 41/70 (58%), Positives = 59/70 (84%)
 Frame = +3

Query: 129 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
           M+ +AAYLLAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGRE
Sbjct: 1   MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGRE 60

Query: 309 KLSSMPVGGG 338
           K +S+P GGG
Sbjct: 61  KFASVPSGGG 70


>02_04_0074 -
           19474786-19474812,19475174-19475400,19476362-19476496,
           19478662-19479193
          Length = 306

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 34/71 (47%), Positives = 53/71 (74%)
 Frame = +3

Query: 126 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR 305
           +M++++AYLLA L G   P+A D+  IL SVG E D  K++ ++++L GKD+ ++IA+GR
Sbjct: 193 RMKFISAYLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGR 252

Query: 306 EKLSSMPVGGG 338
           EK +S+P GGG
Sbjct: 253 EKFASVPCGGG 263


>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
          Length = 114

 Score = 79.0 bits (186), Expect = 6e-15
 Identities = 33/70 (47%), Positives = 53/70 (75%)
 Frame = +3

Query: 129 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
           M++++AYL+A L G ++P A D+  IL SVG E D  K++ ++++++GKD+ +LIA GRE
Sbjct: 1   MKFISAYLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGRE 60

Query: 309 KLSSMPVGGG 338
           K +S+P GGG
Sbjct: 61  KFASVPSGGG 70


>07_01_1001 - 8460467-8460799
          Length = 110

 Score = 65.3 bits (152), Expect = 7e-11
 Identities = 30/68 (44%), Positives = 45/68 (66%)
 Frame = +3

Query: 129 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
           MR+VAAYL+A +GG  +P   DV  IL +VG + D +KL  +  ++ GKD+ +++AAG E
Sbjct: 1   MRFVAAYLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSE 60

Query: 309 KLSSMPVG 332
            L+   VG
Sbjct: 61  MLAFGGVG 68


>07_03_0321 + 16757414-16757743
          Length = 109

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = +3

Query: 129 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 308
           MR+VAAYL+A +GG  +P   DV  IL +VG + D +KL  +  ++ GKD+ +++AAG E
Sbjct: 1   MRFVAAYLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSE 60

Query: 309 KLS 317
            L+
Sbjct: 61  MLA 63


>01_06_0098 - 26416768-26416998
          Length = 76

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 180 PAAADVEKILSSVGIEADAEKLKKVITELNGKD 278
           P    V KI+ +V IEAD+ + K ++  L GKD
Sbjct: 16  PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48


>08_02_1093 - 24271826-24273427
          Length = 533

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = +3

Query: 126 KMRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR 305
           + R  AA  +AV  G+TT AAA  +   SS G     + ++ +   L  +D    +A  R
Sbjct: 3   RKREAAAAAVAVADGETTTAAARADSSSSSEGGSVCDDVVRNIFARLPARDAVASMALSR 62


>06_03_0854 + 25400855-25403741,25406174-25407708
          Length = 1473

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 23/79 (29%), Positives = 34/79 (43%)
 Frame = -1

Query: 337  PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPST 158
            PPP  I  +    A +S     P+S+V + L+ SASA+       F+ +  A   +PP  
Sbjct: 1120 PPPAPIPAATPAKALVSAPAPAPISTVSSTLAASASAA-----AAFAPAPVAAEAIPPPP 1174

Query: 157  ASKYAAT*RIF*XLIDTKR 101
                AA   +     D KR
Sbjct: 1175 PPLPAAATAVAAPAPDRKR 1193


>12_01_0090 + 717524-719080
          Length = 518

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 334 PPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIF 200
           PP  +  S   P  ++ S+S   SS +   + ++S S+PT L  F
Sbjct: 60  PPAVLSPSLVCPVIVAFSSSQAPSSALLLFNHASSCSLPTPLPTF 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,569,090
Number of Sequences: 37544
Number of extensions: 192446
Number of successful extensions: 603
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2998973440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)