Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_L03
(930 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 49 8e-07
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 32 0.10
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 31 0.18
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 31 0.23
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 30 0.40
SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces pomb... 30 0.40
SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit T... 30 0.40
SPBC8D2.19 |mde3||serine/threonine protein kinase Mde3|Schizosac... 29 0.71
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 29 0.71
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 29 0.93
SPAC1610.04 |mug99||meiotically upregulated gene Mug99|Schizosac... 29 1.2
SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr... 28 1.6
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 28 1.6
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 28 2.2
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 28 2.2
SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces po... 28 2.2
SPBC1105.06 |pmc4|med4|RNA polymerase II holoenzyme component Pm... 27 3.8
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 27 5.0
SPBC28F2.09 |||transcription factor TFIIA complex large subunit ... 27 5.0
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 27 5.0
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 27 5.0
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 27 5.0
SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces ... 26 6.6
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 6.6
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 26 6.6
SPBC660.13c |ssb1|rpa1, rad11|DNA replication factor A subunit S... 26 6.6
SPBC11B10.04c |mrps28||mitochondrial ribosomal protein subunit S... 26 8.7
SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces pombe... 26 8.7
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 26 8.7
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 26 8.7
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 8.7
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 26 8.7
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 49.2 bits (112), Expect = 8e-07
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 148 VDYSKWKDIEISDDED-ETHPNIDTPSLFRWR 240
+DYSKW +E+SDD D E HPN+D S RWR
Sbjct: 3 IDYSKWDKLELSDDSDIEVHPNVDKKSFIRWR 34
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 32.3 bits (70), Expect = 0.10
Identities = 20/84 (23%), Positives = 36/84 (42%)
Frame = +1
Query: 373 NLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNE 552
N+ +LK + EL+ + +KR E + P V PG KT++ S
Sbjct: 493 NIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKA 552
Query: 553 NLTEEEKEAKMKKFIKENEKFLKQ 624
N + K++ E+E+ ++Q
Sbjct: 553 NFISIRGPELLNKYVGESERAVRQ 576
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 31.5 bits (68), Expect = 0.18
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 385 LKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNENLTE 564
LKK L +L + + IL + EELR K + S N +A R S N E
Sbjct: 252 LKKDLKDLVEEFQPILDKGEELRSDLKLKDDTFNDYSSASMELNTSNLRA-RASFSNFME 310
Query: 565 EEKEAKMKKFIKENEKFLKQFGL-LRKYEDSTKFLLD 672
EK K+ + + N L+ L L + + S K L +
Sbjct: 311 NEK--KLYEKVNTNRTLLRNANLTLNEAQQSVKSLTE 345
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = +1
Query: 328 TETRKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGF 507
TE+ KI+ ++AD+ NS K + N E + K+ E + + PW D S+P
Sbjct: 63 TESTGKIT-SEADTEKYNSSKSPV----NKEGSVEKKSSE-KSSTNNKPWRGDNTSKPSA 116
Query: 508 NKTVINTKALRPSNENLTEEEKE 576
N + T + E ++ K+
Sbjct: 117 NSSAERTSSQHQKPETSSQIGKD 139
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 30.3 bits (65), Expect = 0.40
Identities = 25/95 (26%), Positives = 46/95 (48%)
Frame = +1
Query: 340 KKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTV 519
K+ + + PN+ +L+KML E+K + +EE R +++ I+E K +
Sbjct: 235 KQAAGSKRKGPNVTALQKML------EEKRAREEEEQRIREEEA-----RIAEE--EKRL 281
Query: 520 INTKALRPSNENLTEEEKEAKMKKFIKENEKFLKQ 624
+ R L ++EKE K K+ +K K+L +
Sbjct: 282 AEVEEARKEEARLKKKEKERKKKEEMKAQGKYLSK 316
>SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 202
Score = 30.3 bits (65), Expect = 0.40
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 403 ELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNENLTEEEK-EA 579
E+ E+ +L EELRK++++ D +++P I +K LR E K +
Sbjct: 85 EISQLEQDLLVAQEELRKREQY-----DELAKP------IMSKGLRSRTEQQESIGKLQD 133
Query: 580 KMKKFIKENEKFLKQFGLLRKYEDSTKFLLDHNQLVCEETAN 705
+++ +EN ++K + L + D T ++H Q + +N
Sbjct: 134 AIRELEEENANYVKAWNLRKDIFDETLKQMNHLQSILHPPSN 175
>SPAC16E8.11c |tfb1||transcription factor TFIIH complex subunit
Tfb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 477
Score = 30.3 bits (65), Expect = 0.40
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = +1
Query: 406 LENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNENLTEEEKEAKM 585
+ N+ + ++R E + K NVD ++ K + ++L +N +L + KEA M
Sbjct: 34 ITNELRNAIQRQRE-GSQSKPQGANVDRVNSTNLEKDIDLQESLLTNNPDLLQTFKEAVM 92
Query: 586 KKFIKENEKFLKQFGLLRKY 645
K + + + + LLR +
Sbjct: 93 KGHLSNEQFWSTRLHLLRAH 112
>SPBC8D2.19 |mde3||serine/threonine protein kinase
Mde3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 559
Score = 29.5 bits (63), Expect = 0.71
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 182 PTMKTRPIQTLIPHHCFDGGTR--PVWNAWKSDAARKRNWSKE 304
P K PIQ L+P +C +G + P AW D + KE
Sbjct: 278 PPTKPYPIQKLLPQNCPEGHAKMIPCLLAWNPDVRPTAKYCKE 320
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 646 EDSTKFLLDHNQLVCEETANYLGHLV 723
E T FLLD QL +E Y GH+V
Sbjct: 408 EGQTLFLLDQKQLGADEKPKYAGHVV 433
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 29.1 bits (62), Expect = 0.93
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Frame = +1
Query: 358 DADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKAL 537
D + L + + EL + LK E + P V PG KT++
Sbjct: 128 DISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVA 187
Query: 538 RPSNENLTEEEKEAKMKKFIKENEKFLKQ-FGLLRKYEDSTKFL 666
N + A + K+I E+ + +++ FG +++E F+
Sbjct: 188 ASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFM 231
>SPAC1610.04 |mug99||meiotically upregulated gene
Mug99|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 529 KALRPSNENLTEEEKEAK-----MKKFIKENEKFLKQFGLLRKYEDSTKFLLDHNQLVCE 693
+A SN L EK AK +++F K+ +KF K FG L+ Y + QL+ +
Sbjct: 283 RATEFSNSMLISIEKWAKYCDVDLQEFEKKLQKFWKNFGTLKLYSNIESLPASLKQLIKD 342
Query: 694 E 696
E
Sbjct: 343 E 343
>SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 319
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Frame = +1
Query: 547 NENLTEEEK---EAKMKKFIKENEKFLK---QFGL-LRKYEDSTKFLLDHNQLVCEETAN 705
N N+ E+K E+ KKF+K+N + +K Q + +R+ E+ + L+ N + +
Sbjct: 7 NSNINNEDKLPMESLKKKFLKQNREIIKINTQLSIKIRESENEIQDLIQENFTL----KS 62
Query: 706 YLGHLVY*FRNGGET 750
YL L FRN +T
Sbjct: 63 YLVKLEARFRNQSQT 77
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 28.3 bits (60), Expect = 1.6
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +1
Query: 325 LTETRKKISEADADSPNLNSLKKMLAELENDEKKILKRD-EELRKKDKHTPWNVDTISEP 501
LTE KI E+ + +LK+ E+ N + LK + E++ +++ +
Sbjct: 773 LTENTGKILESVVEKSMQVALKE---EIANSVRNALKNNLEKIESFLENSIAELQNSVRE 829
Query: 502 GFNKTVINTKALRPSNENLTEEEKEAKMK-KFIKENEKFLKQF--GLLRKYED 651
F+K + LR S +N+ +KE+++K + E K L+ + +L K+ D
Sbjct: 830 DFDKQTSSLAQLRYSIQNVAHAQKESEVKYNELNEQVKTLEGYVETVLEKFND 882
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 364 DSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVI-NTKALR 540
DS L + +ELE+ +K +LK+ E L+KK + TI F+K + N+ LR
Sbjct: 353 DSQFAAGLSLLASELES-QKNLLKKFENLKKKSSKDFLSPSTILSNAFSKVSLPNSLILR 411
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 27.9 bits (59), Expect = 2.2
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +1
Query: 346 ISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTIS-EPGFNKTVI 522
+SE DS N + E NDE K+L RD E ++ +K + N + S + + +
Sbjct: 1 MSENSTDSKNFQ-FSEGSRESSNDELKVLLRDTETKEDEKSSFSNSEEESIIENLSDSSV 59
Query: 523 NTKALRPSNENLTEEEKEAKMKKFIKENEKFLKQFGL 633
N K ++ L++ E+K + ++++ + F L
Sbjct: 60 N-KEYAKNSLKLSDAVSESKYLNPLLKDKRHDRSFAL 95
>SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 218
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 427 ILKRDEELRKKDKHTPWNVDTISEPGFNKTVI-NTKALRPSNENLTEEEKEAKMKKFIKE 603
ILKR EE R++ K N+ ISEP + NT + +TE + E+ ++ K
Sbjct: 157 ILKRIEEDRERHKRMRENIWAISEPELEAEIAWNT------TQGITESDLESLKDEYEKF 210
Query: 604 NE 609
NE
Sbjct: 211 NE 212
>SPBC1105.06 |pmc4|med4|RNA polymerase II holoenzyme component Pmc4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 403 ELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNENLTEEEKEAK 582
EL+N+ +LK+D+EL + + + +I + KTV K + + E L + + K
Sbjct: 56 ELQNEISSLLKQDKELDLQIQDCMREMTSIYDTHLPKTVSGRKRQKVNAETLLDYGR--K 113
Query: 583 MKKF 594
+ KF
Sbjct: 114 LSKF 117
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 26.6 bits (56), Expect = 5.0
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 376 LNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNEN 555
+ L ++ LE + K+L+ DEE++ DT+ + + K L+ + N
Sbjct: 451 MEELNELKNNLEVESSKVLRLDEEMKCLKDEQLSQFDTVFSLTDERDGLQ-KDLKNTKGN 509
Query: 556 LTEE-EKEAKMKKFIKENEKFLKQFGLLRKYEDSTKFLLD-HNQLVCE 693
L +E + A +K I++ E + K DS + L +N L CE
Sbjct: 510 LDDEIGRSAFLKSQIRDQEL------TIEKLHDSLETLSQTNNSLQCE 551
>SPBC28F2.09 |||transcription factor TFIIA complex large subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 369
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 169 DIEISDDEDETHPNIDTPS 225
D I D+EDE P +DTPS
Sbjct: 279 DGTIEDNEDEKKPPVDTPS 297
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 352 EADADSPNLNSLKKMLAELENDEKKILKRDEELRKK 459
E AD+P L K + ++ +N + + K+DE+LRK+
Sbjct: 326 EEVADAPTLEK-KSLQSDSKNKKSQKRKKDEDLRKE 360
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 677 LWSSKNLVESSYLRSNPNCFKNFSFSLINFFILASFSSSVRFSLL 543
LWSSK L+ Y R NP ++ L+N +L ++ F LL
Sbjct: 324 LWSSKELLSKDYWRPNPLNPRDALSILVNGPLLLEETNISGFVLL 368
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 547 NENLTEEEKEAKMKKFIKENEK 612
+E L E EKE KKF +ENEK
Sbjct: 668 HETLYELEKEKIKKKFDRENEK 689
>SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 376
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 721 PDDQGNWQFLHRLTGYGPAKI*WSPHIYGA 632
PDD+ ++QF YG + + P++ GA
Sbjct: 220 PDDEEDYQFSDNFDAYGAPRSEFYPYLLGA 249
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 343 KISEADADSPNLNSLK--KMLAELENDEKKILKRDEELRKK 459
K+S+ S S K K LE EKK+ +++EEL KK
Sbjct: 4 KLSKKKLKSLEYRSKKFDKKSQSLEEHEKKVQQKNEELEKK 44
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 508 NKTVINTKAL--RPSNENLTEEEKEAKMKK 591
+KT + K L RPSN+ LT+E K K K
Sbjct: 595 SKTSSHNKQLKRRPSNDTLTQEAKSKKQAK 624
>SPBC660.13c |ssb1|rpa1, rad11|DNA replication factor A subunit Ssb1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 609
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 376 LNSLKKMLAELENDEKKILKRDEELRKKDKHT 471
+N KK ++N+ + + +RD E+RK + T
Sbjct: 257 VNIAKKQYTNVQNEYELMFERDTEIRKAEDQT 288
>SPBC11B10.04c |mrps28||mitochondrial ribosomal protein subunit
S28|Schizosaccharomyces pombe|chr 2|||Manual
Length = 288
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 376 LNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEP 501
L LKK A K+ LKR EELRK+ N+DT+++P
Sbjct: 37 LQGLKKQKANQRR--KQNLKRREELRKQ------NLDTLADP 70
>SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 564
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 331 ETRKKISEADADSPNLNSLKKMLAELENDEKKILKRDEE 447
ET KK + +ADS S ++ LAE EN +++ + DEE
Sbjct: 12 ETNKKRNPEEADSLEPASSRRRLAE-ENSDEENEEFDEE 49
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 370 PNLNSLKKMLAELENDEKKILKRDEE 447
PNL+ + L +LEND + +L RD E
Sbjct: 17 PNLDDREYRLIKLENDLEVLLVRDPE 42
>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 487 TISEPGFNKTVINTKALRPSNENLTE 564
T+ P NKT+++ PSN+ LTE
Sbjct: 101 TVETPLANKTIVSPLPESPSNDALTE 126
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 442 EELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNENLTEEEKEAKMKKFIKEN 606
E L + ++V +++ N + +T P+N LT E+E ++K +EN
Sbjct: 111 EALSISQGNDSYDVSKLTDLSKNSEIDHTDGELPANAALTLREQEKVLEKVSREN 165
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +1
Query: 328 TETRKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGF 507
+E K +SE + D P + +++ N + K K+ ++ +KK K T D ++
Sbjct: 67 SEAEKSVSEEEQDEPLVEGESPIVS--TNKKAKNKKKKKKQQKKKKVT-GKRDLDNQSSD 123
Query: 508 NKTVINTKALRPSNENLTEEEK-EAKMKKFIKENEK 612
N+ + ++ + ++++ E EK A++K +E ++
Sbjct: 124 NEKLEGLESSKNIDDDIDEIEKAAAELKLKYREQDQ 159
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,444,922
Number of Sequences: 5004
Number of extensions: 71753
Number of successful extensions: 319
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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