Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_L03
(930 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_33418| Best HMM Match : IQ (HMM E-Value=1.6) 35 0.082
SB_48173| Best HMM Match : WD40 (HMM E-Value=7.3e-18) 34 0.14
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 34 0.19
SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_15746| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 32 0.57
SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8) 32 0.76
SB_39000| Best HMM Match : TolA (HMM E-Value=0.55) 32 0.76
SB_23812| Best HMM Match : Filament (HMM E-Value=0.05) 31 1.0
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 31 1.8
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4) 31 1.8
SB_9788| Best HMM Match : Seryl_tRNA_N (HMM E-Value=4.9) 29 4.1
SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28) 29 5.4
SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24) 29 5.4
SB_36234| Best HMM Match : E-MAP-115 (HMM E-Value=0.25) 29 5.4
SB_7565| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 29 5.4
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_54524| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 29 5.4
SB_54477| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 29 5.4
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_17771| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3) 28 9.4
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 28 9.4
SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10) 28 9.4
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 28 9.4
>SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 756
Score = 73.3 bits (172), Expect = 3e-13
Identities = 35/98 (35%), Positives = 52/98 (53%)
Frame = +1
Query: 172 IEISDDEDETHPNIDTPSLFRWRHXXXXXXXXXXXXXXXXXXXXXXXXXXXLTETRKKIS 351
+++SDDED+THPNIDTPSLFRWRH L + RK++
Sbjct: 623 MQVSDDEDDTHPNIDTPSLFRWRHQARVERMEEMKREKEKLESKITENKRQLDQLRKQLE 682
Query: 352 EADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDK 465
+ D + L K L ++E ++KK+ K +E+ KK+K
Sbjct: 683 QVDLSKK--HELLKKLEDVEKEQKKLRKEEEDFHKKEK 718
>SB_33418| Best HMM Match : IQ (HMM E-Value=1.6)
Length = 344
Score = 35.1 bits (77), Expect = 0.082
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = +1
Query: 424 KILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNENLTEEEKEAKMKKFIKE 603
++ + + L ++ W ++ ++E T+ K+LR + E L + + E +++ +
Sbjct: 270 ELTRHEVNLERQQTMQGWTIEKLNE----LTLEEIKSLRKNFEQLIQAQNEMLVRELMMR 325
Query: 604 NEKFLKQFGLLRKYEDSTK 660
+ LKQ +L + EDSTK
Sbjct: 326 DALHLKQDSMLLEVEDSTK 344
>SB_48173| Best HMM Match : WD40 (HMM E-Value=7.3e-18)
Length = 659
Score = 34.3 bits (75), Expect = 0.14
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +1
Query: 400 AELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNENLTEEEKEA 579
A+ E+DE+ +LK + + KK K + T S G N+ VI+ + SNE+L+ EE+EA
Sbjct: 133 ADDEDDERDVLKTERRIIKKPKTALLDKRT-SLHGLNRKVID---IPDSNEDLSPEEEEA 188
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 33.9 bits (74), Expect = 0.19
Identities = 23/121 (19%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +1
Query: 325 LTETRKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPG 504
L + ++K E + +S ++ E++ ++ KR+EE+R+K+K N I +
Sbjct: 1157 LKDAKRKARE-ERESRRAAEAERRRLEVQKKREEKKKREEEMREKEKEMEQN--KIDQEK 1213
Query: 505 FNKTVINTKALRPSNENLTEEEK--EAKMKKFIKENEKFLKQFGLLRKYEDSTKFLLDHN 678
+ ++ ++ + + L EE + E ++++ +E+E+ + +R+ E+ + L +
Sbjct: 1214 RKQELMESRRFQEEQDRLEEERRLEEERLRQLEEEDEQRRLEEEQIREAEEELRRLQEER 1273
Query: 679 Q 681
+
Sbjct: 1274 E 1274
>SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 32.7 bits (71), Expect = 0.43
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 475 WNVDTISEPGFNKTVINTKALRPSNENLTEEEKEAKMKKFIKE-NEK-FLKQFGLLRKYE 648
W ++ P K++ + K LR E++K K KF++E EK LK+ + K
Sbjct: 236 WRINPFMYPYQQKSIKDIKFLR----GFGEKQKVIKDIKFLREFGEKVILKRKAAIEKGM 291
Query: 649 DSTKFLLDHNQLVCEETAN 705
D K +L+H +C+E N
Sbjct: 292 DMPKDVLNHLLYMCKEDVN 310
>SB_15746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 32.7 bits (71), Expect = 0.43
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 349 SEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVD---TISEPGFNKTV 519
S D +P + L++++A E ++ KIL + R K + P+N D +S G+
Sbjct: 6 SVQDTTTPRASKLRELVAREEMNKLKILGKKLNTRNKARIKPYNADEPFMLSSRGYEFAF 65
Query: 520 INTKALRPSN 549
AL P N
Sbjct: 66 YTRPALLPPN 75
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 32.3 bits (70), Expect = 0.57
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 325 LTETRKKISEADADSPNLNSLKKMLAELENDEKKILKR 438
L +TRKKISE ++D NL + + L E D K++L+R
Sbjct: 2329 LHDTRKKISELESDRNNLMAENENLKEELLDTKEVLER 2366
>SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8)
Length = 476
Score = 31.9 bits (69), Expect = 0.76
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Frame = +1
Query: 331 ETRKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFN 510
+T + +S ++ NL S E++ K +L++ E K + + DT+ E FN
Sbjct: 97 QTSEHLSSSEKRFQNLKSADNGKDEIQ---KVVLRKVERSHSKKEEDSKSTDTVKEESFN 153
Query: 511 ----KTVINTKALRPSNENLTEEEKEAKMKKFIKENEK 612
K + K + E+ E +K +M+K K + K
Sbjct: 154 VKTLKQSLKEKDMSLEGEDTNESDKITEMRKDNKFDSK 191
>SB_39000| Best HMM Match : TolA (HMM E-Value=0.55)
Length = 576
Score = 31.9 bits (69), Expect = 0.76
Identities = 23/110 (20%), Positives = 52/110 (47%)
Frame = +1
Query: 331 ETRKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFN 510
E K+ + D + +++ LA+ ++E+K+ + +EE K+D+ + +
Sbjct: 221 EQAVKVRDDDIEFTYAQKIRQ-LAKARDEEEKLRRWEEEKMKEDEEFEDKLKARTLI-LE 278
Query: 511 KTVINTKALRPSNENLTEEEKEAKMKKFIKENEKFLKQFGLLRKYEDSTK 660
+ + R E ++ ++A +K F + EK LK+ GL +E+ +
Sbjct: 279 RKIKEQDREREEMERESQNLEQAGLKDFKTKQEKRLKEIGLAELFEEEQR 328
Score = 28.3 bits (60), Expect = 9.4
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Frame = +1
Query: 337 RKKISEADADSPNLNSLKKMLAEL-ENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNK 513
++K+ + + ++ + EL + D +K L+ E+L+ ++H + T E +
Sbjct: 361 KEKVKRKEVHAKQVDEWSRFEEELKQRDAEKTLRDAEKLKDFERHLEIDKQTAYEISERR 420
Query: 514 TVINTKALRPSNENLTEEEKEAKMKKFIKENEKFLKQFGLLRKYEDSTKFLLDHNQLVCE 693
R E E+EKEA ++ + K+ L R E++ K + D ++ + E
Sbjct: 421 --------RSEREKRIEQEKEALRTAELEATLQGSKKKDLERTTEEARKVVADLDEGIRE 472
Query: 694 E 696
E
Sbjct: 473 E 473
>SB_23812| Best HMM Match : Filament (HMM E-Value=0.05)
Length = 307
Score = 31.5 bits (68), Expect = 1.0
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +1
Query: 376 LNSLKKMLAELENDEKKILKRD-EELRKKDKHTPWNVDTISE--PGFNKTVINTKALRPS 546
L+SL LA LEN E+ LKRD +E + + H T+ + G + + TK S
Sbjct: 187 LDSLHNRLAGLENSEQHELKRDLDEALESNSHLKGANQTLEDNLRGLEQQLEKTKGRAKS 246
Query: 547 NENLTEEEKEAKMKKFIKENEKFLK 621
+ ++ K K ++ E E +K
Sbjct: 247 LKYQLDQVKREKKQRQEDEEEATVK 271
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 331 ETRKKISEADADSPNL-NSLKKMLAELENDEKKILKRDEELRKKDK 465
E R K E+ + +L LK+MLAE E + KK+L+ +LR ++K
Sbjct: 1038 EIRFKSRESRTEDLDLIQELKQMLAERELEMKKLLRNMNDLRSQNK 1083
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 376 LNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSN-- 549
L SLKK ELEN K +R +E K+ ++ + ++ K+V ++ R
Sbjct: 679 LKSLKKKHEELENSSKGAERRSKEAEKRIENLEQECASANDMAMEKSVELSRLKRTIEKK 738
Query: 550 -ENLTEEEKEAKMK 588
+ LT+E E + K
Sbjct: 739 IDKLTKENSELRRK 752
>SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4)
Length = 169
Score = 30.7 bits (66), Expect = 1.8
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +1
Query: 331 ETRKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKK--DKHTPWNVDTISEPG 504
E KK +A ++ ++ S +K EL EKK K+ ++ +KK ++ P V T +
Sbjct: 26 EAPKKNIDAMKEAIDIFSQEKSNEELPESEKKKKKKKKDKKKKTEEETVPETVQTETPSA 85
Query: 505 FNKTVINTKALRPSNENLTEEEKEAKMKK 591
K + E TE AK KK
Sbjct: 86 RKKKKKEKEQEETMEEQQTEATSSAKKKK 114
>SB_9788| Best HMM Match : Seryl_tRNA_N (HMM E-Value=4.9)
Length = 149
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/78 (17%), Positives = 36/78 (46%)
Frame = +1
Query: 364 DSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRP 543
D +N+ + ++ +K+L+ ++ +KK ++T + PG+ + K
Sbjct: 58 DKSRINNAEYKESQAVKKRRKLLRGSKKKKKKGRNTKEGGPPSANPGYAPACVREKKEEG 117
Query: 544 SNENLTEEEKEAKMKKFI 597
+ E E+K K+++ +
Sbjct: 118 AKEEAKREKKLEKVRQLM 135
>SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28)
Length = 1282
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 487 TISEPGFNKTVINTKALRPSNENLTEEEKEAKMKKFIKENEKFLKQFGL 633
T EP K+ +NT L+ E +T+ ++ K K ++ +K K G+
Sbjct: 645 TDEEPRIEKSGMNTTLLKDGGEEVTDLKELEKQKLLTQDQDKESKTIGI 693
>SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24)
Length = 1001
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/85 (23%), Positives = 34/85 (40%)
Frame = +1
Query: 328 TETRKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGF 507
T+T K + DAD N + K ++ + ++ D L K + H P +S
Sbjct: 896 TDTDDKQCQTDADLINSSETKHVVVINKEPKENRAPIDVTLVKTENHNPSFQSPLSPTRG 955
Query: 508 NKTVINTKALRPSNENLTEEEKEAK 582
K + K P + E+E E +
Sbjct: 956 KKPSVKKKGKVPKKDKTQEKEVEPR 980
>SB_36234| Best HMM Match : E-MAP-115 (HMM E-Value=0.25)
Length = 257
Score = 29.1 bits (62), Expect = 5.4
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +1
Query: 430 LKRDEEL-RKKDKHTPWNVDT-ISEPGFNKTVINTKALRPSNENLTEEEKEAKMKKFIKE 603
LKR+ E+ RK++ ++DT IS G KTV K+ R + + KE + ++ K+
Sbjct: 68 LKRENEIKRKREAEMFASMDTGISGRGA-KTVHRDKSGRKRDLEAEKRIKEEEEREKAKD 126
Query: 604 NEKFLKQFG 630
+EKF KQ+G
Sbjct: 127 DEKF-KQWG 134
>SB_7565| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 267
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 568 EKEAKMKKFIKENEKFLKQFGLLRK-YEDSTKFLLDHNQ 681
++E K+K+ KEN + L + GLLR + K+L D Q
Sbjct: 39 DQEVKVKELSKENSRLLSEVGLLRSTLSNQGKWLNDLEQ 77
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1
Query: 358 DADSPNLNSL-KKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKA 534
D +P +L ++ E E +E+K K +++ RK+ + + K+ + K
Sbjct: 463 DLSTPKKTALVAEIKKEAEEEEEKEPKSEKKKRKRTSDNESEKEETTPSKLKKSKKDKKK 522
Query: 535 LRPSNENLTEEEKEAKMKKFIKENEK 612
+ + E EEK+ K KK K+ K
Sbjct: 523 AKEATEEDDGEEKKEKKKKKKKKKGK 548
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 29.1 bits (62), Expect = 5.4
Identities = 23/110 (20%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +1
Query: 325 LTETRKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPG 504
LT+ ++ +E L + ++ + +LE + ++ ++++L++K + N + ++
Sbjct: 20 LTKLKEVEAERAELEDQLKTEEEKIDKLEGEIEQRATKEKDLKEKMRKLEKNNERLANEV 79
Query: 505 FNKTVINTK-ALRPSNENLTEEEKEAKMKKFIKENEKFLKQFGLLRKYED 651
+K + K AL + EEE + K K + K +K L Y+D
Sbjct: 80 KSKNDLLVKVALLETERKRLEEELKTKEKSYSKIEDKCRSMKDKLGHYDD 129
>SB_54524| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 259
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 568 EKEAKMKKFIKENEKFLKQFGLLRK-YEDSTKFLLDHNQ 681
++E K+K+ KEN + L + GLLR + K+L D Q
Sbjct: 39 DQEVKVKELSKENSRLLSEVGLLRSTLSNQGKWLNDLEQ 77
>SB_54477| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 267
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 568 EKEAKMKKFIKENEKFLKQFGLLRK-YEDSTKFLLDHNQ 681
++E K+K+ KEN + L + GLLR + K+L D Q
Sbjct: 39 DQEVKVKELSKENSRLLSEVGLLRSTLSNQGKWLNDLEQ 77
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 29.1 bits (62), Expect = 5.4
Identities = 19/92 (20%), Positives = 39/92 (42%)
Frame = +1
Query: 337 RKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKT 516
RKK + KK + + ++ K K+ + +KK++ T+ +
Sbjct: 19 RKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKKEEEAEVGEKTLEAENEEEK 78
Query: 517 VINTKALRPSNENLTEEEKEAKMKKFIKENEK 612
+ T+ + E + EEEKE ++ +E E+
Sbjct: 79 IEETEKEKDEEEKIEEEEKEGGEEENEEEEEE 110
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 433 KRDEELRKKDKHTPWNVDTISE--PGFNKTVINTKALRPSN-ENLTEEEKEAKMKKFIKE 603
K D E+ +K+KH P + ISE G N ++ + L+ + + +EE+E K + E
Sbjct: 1086 KSDVEVARKNKHMPEALYKISETISGMNDSITLKEPLKAKDGDGRNKEEQELKDR---ME 1142
Query: 604 NEK 612
NEK
Sbjct: 1143 NEK 1145
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +1
Query: 337 RKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKT 516
RKK E + KK E E +E+ + +EE +K+D T + +EP +
Sbjct: 1049 RKKAEEEEKKRKEEEESKKK-DEKEKEEEDEDEEEEEEKKEDAKTDDSETKEAEPESKEA 1107
Query: 517 VINTKALRPSNENLTEEEKE 576
+K P ++ T+ E E
Sbjct: 1108 EPESKEAEPESKEETKSEDE 1127
>SB_17771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 349 SEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVD 486
S D +P + L++ +A E ++ KIL + R K + P+N D
Sbjct: 6 SVQDTTTPRASKLREFVAREEMNKLKILGKKLNTRNKARIKPYNAD 51
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 331 ETRKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKK 459
E RK + +K+M+ EL E++ KR+E+ RKK
Sbjct: 181 ERRKHQERMEIQRREAEKVKQMMDELRKKEERRRKREEKRRKK 223
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 349 SEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWN 480
S AD NSL+K LAE + E K L++ L + P N
Sbjct: 688 SAADTHREKTNSLQKELAEAKLSESKALRKVSSLEETLSKAPAN 731
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 635 SNPNCFKNFSFSLINFFILASFSSSVRFSLL 543
S P CF++F+FSL + L S+S R + L
Sbjct: 662 SGPRCFRHFTFSLESVDTLLQRSTSTRLNSL 692
>SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3)
Length = 471
Score = 28.3 bits (60), Expect = 9.4
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 337 RKKISEADADSPNLNSLKKMLAELENDEKKI-LKRDEELRKKDKHTPWNVDTISEPGFNK 513
+KK + ++ N +S+KK E DE+ + K ++ RKK K + S+ +
Sbjct: 266 KKKKEKKTNETDNESSIKKKSCEDSEDEEHLPSKEKKKKRKKSKDSSEGYIKQSKDIIAE 325
Query: 514 TVINTKALRPSNENLTEEEKEAKMK 588
T T L+ S + + +E K K K
Sbjct: 326 T--GTSLLKCSEKKILKEAKRQKRK 348
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 28.3 bits (60), Expect = 9.4
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = +1
Query: 388 KKMLA-ELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNE---N 555
KK LA EL+N KK+ + E + + + + E + + KAL E
Sbjct: 323 KKQLADELQNVTKKLKETSSEYERLSEELGERENLLKESEKKRNELKNKALSSLKEYRVK 382
Query: 556 LTEEEKEAKM-KKFIKENEKFLKQFGLLRKYEDS 654
+ E+EA+ K+ ++ NE+ K+ LR +S
Sbjct: 383 CKKLEREAEQGKEAMERNERLEKELRELRSLMNS 416
>SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 28.3 bits (60), Expect = 9.4
Identities = 25/91 (27%), Positives = 37/91 (40%)
Frame = +1
Query: 445 ELRKKDKHTPWNVDTISEPGFNKTVINTKALRPSNENLTEEEKEAKMKKFIKENEKFLKQ 624
+L +K+K T N V ++ + PS E KEA ++K K E+ +
Sbjct: 443 DLGEKEKTTTPRSTKRKRDSINSAVNHSTSKTPSTP---AERKEAHLEKERKRRERIARS 499
Query: 625 FGLLRKYEDSTKFLLDHNQLVCEETANYLGH 717
+ LLR S D V E T Y+ H
Sbjct: 500 WFLLRSMIPSCSDTAD-KATVFEMTVAYIHH 529
>SB_26127| Best HMM Match : Pkinase (HMM E-Value=5.3e-10)
Length = 460
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 400 AELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKTVINTKAL--RPSNENLTEEEK 573
+++ +E D LR K TP N D + +PGF+ N +A S + E++K
Sbjct: 23 SDVSMEENDSFNEDNFLRTNIK-TPDNADELWDPGFSSPPSNRRAFFDDDSPTKMAEDDK 81
Query: 574 E 576
E
Sbjct: 82 E 82
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/92 (19%), Positives = 40/92 (43%)
Frame = +1
Query: 337 RKKISEADADSPNLNSLKKMLAELENDEKKILKRDEELRKKDKHTPWNVDTISEPGFNKT 516
+ ++ +A SP++NS ++ + N K+ + EELR+ ++ + K
Sbjct: 1035 QSQLQKARRSSPSVNSDNEVCHDARNTISKLREEMEELRESSAAAQKALEQEKQQRLEKL 1094
Query: 517 VINTKALRPSNENLTEEEKEAKMKKFIKENEK 612
+N + + E L + +E K + E+
Sbjct: 1095 EMNNQEIMFLREELQKAVEETMQKTSTESPEE 1126
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,726,661
Number of Sequences: 59808
Number of extensions: 506392
Number of successful extensions: 1732
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1724
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2705204627
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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