Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_L01
(889 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 35 0.018
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 34 0.024
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 33 0.054
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.13
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.51
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 29 0.88
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 29 1.2
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 29 1.2
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 2.7
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 27 3.6
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 27 3.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.6
SPBC1711.08 |||chaperone activator Aha1 |Schizosaccharomyces pom... 24 3.9
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 27 4.7
SPAC23H3.02c |ini1||RING finger-like protein Ini1|Schizosaccharo... 27 4.7
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 4.7
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 6.2
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 26 6.2
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 26 8.2
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 26 8.2
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 480 PYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAP--YPTTHGAPY 629
P+P YP PV+ A P+ ++PYP+ G P TH APY
Sbjct: 180 PHPHFHNNNYPPPYCFQSPVSPGATVPLQHHSPYPSDNGFPGHRRQTHFAPY 231
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +3
Query: 456 PYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPV 635
P+P TQ +P T+ +P P+P + YP P + GA P H +PYP
Sbjct: 162 PFPPTQHH-HPHTRPPHHP-----PHPHFHNNNYPPPYCFQSPVSPGATVPLQHHSPYPS 215
Query: 636 HHG 644
+G
Sbjct: 216 DNG 218
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 34.3 bits (75), Expect = 0.024
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +3
Query: 429 RHTRQLRXAPYPTTQGAPYP-TTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAP- 602
R +RQ + P T +P P T LP P +VP A + P V + PTT P
Sbjct: 411 RDSRQEKTQP---TNASPAPLVTPSLPVPSIPAVPGMEAMAMPPGVTSSIAVPTTSSMPL 467
Query: 603 --YPTTHGAP 626
PT GAP
Sbjct: 468 QGMPTMFGAP 477
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 33.1 bits (72), Expect = 0.054
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = +3
Query: 399 GCAIPGNSGXRHTRQLRXAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAP 578
G A+P H + TTQ P T + + P ++ VA+N P
Sbjct: 170 GTALPST----HANPVAAPSTATTQHTQLPKTSAVSHQKPHEAPSTAVKAPTATVAENEP 225
Query: 579 YPTTQGAPYPTT 614
YP Q P T+
Sbjct: 226 YPKPQSVPTTTS 237
Score = 26.6 bits (56), Expect = 4.7
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Frame = +3
Query: 393 DSGCAIPGNSGXRHTRQLRXAPYPTTQGAPYP-----TTQGLPYPVAQSVPYPVAQSAPY 557
D+ + GN +++ + P+T P TTQ P +V + AP
Sbjct: 151 DNYTTVNGNVNQSYSKGIDGTALPSTHANPVAAPSTATTQHTQLPKTSAVSHQKPHEAP- 209
Query: 558 PVAQNAPYPTT-QGAPYPTTHGAP 626
A AP T + PYP P
Sbjct: 210 STAVKAPTATVAENEPYPKPQSVP 233
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = +3
Query: 456 PYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNA---PYPTTQGAPYPTTHGAP 626
P P+ P P G P VP P + P PV A P P+ P P GAP
Sbjct: 1105 PKPSVAVPPVPAPSGAP-----PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
Score = 27.5 bits (58), Expect = 2.7
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Frame = +3
Query: 456 PYPTTQGAPYPTTQGLPY--PVAQSVPYPVAQSAPYPVAQNA---PYPTTQGAPYPTTHG 620
P T+ AP +P A VP P A + P PV A P PT+ ++ G
Sbjct: 999 PVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSG 1058
Query: 621 AP 626
AP
Sbjct: 1059 AP 1060
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.51
Identities = 25/82 (30%), Positives = 32/82 (39%)
Frame = +3
Query: 357 TAHKRRRQCALPDSGCAIPGNSGXRHTRQLRXAPYPTTQGAPYPTTQGLPYPVAQSVPYP 536
+A +RR SG + T L+ A PT GAP + P P
Sbjct: 1399 SAPERRDSFGSVSSGSNVSSIEDETSTMPLK-ASQPTNPGAPSNHAPQVVPPAPMHAVAP 1457
Query: 537 VAQSAPYPVAQNAPYPTTQGAP 602
V AP V NAP P++ AP
Sbjct: 1458 VQPKAPGMVT-NAPAPSSAPAP 1478
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +3
Query: 477 APYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAP 626
A PT G P A V P A PV AP T AP P++ AP
Sbjct: 1430 ASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVT-NAPAPSSAPAP 1478
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 29.1 bits (62), Expect = 0.88
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +3
Query: 504 PYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAP 626
P P Q+ P + SAP Q YP Q APYP P
Sbjct: 208 PPPPQQNYPPAASSSAPPMQYQQTAYPPQQ-APYPPVQAYP 247
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 516 AQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYP 632
AQ P P Q+ P + +AP Q YP APYP
Sbjct: 204 AQPPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQ-APYP 241
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/78 (26%), Positives = 28/78 (35%)
Frame = +3
Query: 495 QGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGCRRILDGSTP 674
+GL P SV + S P P N+ P T A + AP P R P
Sbjct: 43 RGLTIPPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQP 102
Query: 675 WQT*MWRTQHPRHRTSQP 728
+ Q P + +QP
Sbjct: 103 YPPQGGYPQQPYYYPNQP 120
Score = 27.1 bits (57), Expect = 3.6
Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Frame = +3
Query: 366 KRRRQCALPDSGCAIPGNSGXRHTRQLRXAPYPTTQGAPYPTTQGLPYPVAQSVPYPVA- 542
K + Q P G IP H+ P P+ + P T A P P A
Sbjct: 33 KAKPQWECPVRGLTIPPPPSVDHSAPPSGPP-PSYSNSAAPATPAASASSAAPAPAPAAS 91
Query: 543 QSAPYPVAQNAPYPTTQGAP 602
Q+ Y A PYP G P
Sbjct: 92 QNRAYGAAPQ-PYPPQGGYP 110
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 474 GAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPV 635
G P PT++ P+P + A P PV QN P T+ P P P+
Sbjct: 961 GLP-PTSKSKPFPRLATGGSTAAARGPRPVVQNKP-AATKPVSMPAAKSKPAPM 1012
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = +3
Query: 438 RQLRXAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYP-VAQNAPYPTTQGAPYPTT 614
RQ P+ Q P P QG P +P P+ P V +P P Q T+
Sbjct: 333 RQTTTTPFAGNQVMPTPQVQGSRPPPPPPMPAPIYNVPNVPTVPTVSPNPFLQPTFSGTS 392
Query: 615 HGAPYPVHH 641
+ +P H
Sbjct: 393 QASAHPSIH 401
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 504 PYPVAQSVPYPVAQSAPYPVAQNAP--YPTTQGAPYPTTHGAPYPVHHGCRRILDGSTPW 677
P+P S + ++P P+ + YP + P+T + Y HG + + STP
Sbjct: 355 PHPRVFSANSAFSTTSPPPLTPSTSRDYPFSASTISPSTPFSAYSSSHGIHQRIPASTPT 414
Query: 678 QT 683
T
Sbjct: 415 NT 416
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +2
Query: 434 YPTTQGCSIPDNSGCAIPDNSGST-IPSCSECAIPGCSECAISGCSEC 574
Y T+G + + A+P S T + C C+ P C + GC C
Sbjct: 214 YKETEG-EMDTDEFSALPTGSSITNLAYCGYCSKPSMGACWVYGCQLC 260
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Frame = +3
Query: 453 APYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAP-YPTTHGAPY 629
AP GAP P+A +P + + P P A AP P AP P A
Sbjct: 435 APPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVASIAEL 494
Query: 630 PVHHG 644
P G
Sbjct: 495 PQQDG 499
Score = 26.2 bits (55), Expect = 6.2
Identities = 27/100 (27%), Positives = 32/100 (32%)
Frame = +3
Query: 327 TAPERGTRVDTAHKRRRQCALPDSGCAIPGNSGXRHTRQLRXAPYPTTQGAPYPTTQGLP 506
+AP G + R P AIPG S L A +T P PT LP
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPA-LPPLGNASRTSTP--PVPTPPSLP 424
Query: 507 YPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAP 626
S+P S P P P + P G P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
>SPBC1711.08 |||chaperone activator Aha1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 24.2 bits (50), Expect(2) = 3.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 518 SNWVW*TLSCRVW 480
+NW W + CRVW
Sbjct: 9 NNWHWTSKDCRVW 21
Score = 21.0 bits (42), Expect(2) = 3.9
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 482 WRTLSCRVWS 453
W + CRVWS
Sbjct: 13 WTSKDCRVWS 22
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = +2
Query: 362 PQTSSSMRLTRLRVCHTRQLRXAPYPTTQGCSIPDNSGCAIPDNSGSTIPSCSECAIPGC 541
P S + L ++ + + Q I DN+ C++P S S + S S
Sbjct: 663 PSAESQVCLAEIKTIRPGLVPKKQFSVDQNNVISDNTDCSLPKPSNSKLSSISSDGDASS 722
Query: 542 SECAISGCSEC--AIPNNAGCT 601
+ A+ S A PN+ T
Sbjct: 723 NRMAVPDKSPFVHAAPNSKALT 744
>SPAC23H3.02c |ini1||RING finger-like protein
Ini1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 497 GSTIPSCSECAIPGCSECAISGCSEC 574
GS+ C C PG S+C CSEC
Sbjct: 52 GSSQDRCIICGAPGVSDCYY--CSEC 75
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 4.7
Identities = 24/68 (35%), Positives = 28/68 (41%)
Frame = +3
Query: 435 TRQLRXAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTT 614
T + A YP A +P +P P A +V PVA AP A A P AP P
Sbjct: 352 TTEAAAAQYPQ---AAFPPPPVMPQPAAAAVTTPVA--APVAAAA-AAVPVPPPAPAPA- 404
Query: 615 HGAPYPVH 638
AP H
Sbjct: 405 -AAPAAEH 411
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.2 bits (55), Expect = 6.2
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3
Query: 408 IPGNSGXRHTRQLRXAPYPTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYP 560
IP S T + TT P TT G V VP P A S+P+P
Sbjct: 757 IPTPSWVTETVTSGSVGFTTTIATPVGTTAGT---VLIDVPTPTASSSPFP 804
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -2
Query: 396 SRVRRIDDDVCGR--YQHACLSPAPSTAAEYYTKDYD 292
+R R DDD R Y+ + LS APS A+ Y D D
Sbjct: 159 TRSSRFDDDDDDRAPYEESRLSRAPSRASRYDDDDRD 195
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.8 bits (54), Expect = 8.2
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +3
Query: 462 PTTQGAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNA--PYPTTQGAPYPTTHGAPYPV 635
PTT G Y PYP Q+ + + P VAQ A P T + P PV
Sbjct: 23 PTTSGIVYNMFPACPYPHVQNPAFHGSVDVP-QVAQKAFDPQAATVSESANVSRPTPAPV 81
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/63 (25%), Positives = 21/63 (33%)
Frame = +2
Query: 452 CSIPDNSGCAIPDNSGSTIPSCSECAIPGCSECAISGCSECAIPNNAGCTIPDNARCALP 631
CS D+S P SC P C GC C+ + C+ + C
Sbjct: 226 CSKKDSSPSEKPSCCSQEKKSCCSSKKPSCCSQEKKGC--CSTEKTSCCSQEKKSCCTSE 283
Query: 632 SPS 640
PS
Sbjct: 284 KPS 286
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,064,236
Number of Sequences: 5004
Number of extensions: 60295
Number of successful extensions: 219
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -