Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K23
         (953 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7ACC Cluster: PREDICTED: similar to CG14939-PA...    94   4e-18
UniRef50_Q4SKR3 Cluster: Chromosome undetermined SCAF14565, whol...    90   7e-17
UniRef50_Q8ND76 Cluster: Cyclin-Y; n=55; Eumetazoa|Rep: Cyclin-Y...    89   1e-16
UniRef50_UPI0000D9F107 Cluster: PREDICTED: similar to cyclin fol...    70   1e-10
UniRef50_A6NCM8 Cluster: Uncharacterized protein CCNYL3; n=4; Ca...    69   2e-10
UniRef50_Q5T2Q4 Cluster: Uncharacterized protein C10orf21; n=7; ...    47   8e-04
UniRef50_Q6ZMK7 Cluster: FLJ00312 protein; n=14; Catarrhini|Rep:...    46   0.002
UniRef50_Q8TF27 Cluster: KIAA1975 protein; n=21; Amniota|Rep: KI...    45   0.002
UniRef50_Q54ZC9 Cluster: Putative uncharacterized protein; n=2; ...    40   0.12 
UniRef50_UPI0000E49224 Cluster: PREDICTED: similar to UNC-89; n=...    34   6.1  
UniRef50_P32623 Cluster: Probable glycosidase CRH2 precursor; n=...    33   8.1  

>UniRef50_UPI0000DB7ACC Cluster: PREDICTED: similar to CG14939-PA,
           partial; n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG14939-PA, partial - Apis mellifera
          Length = 77

 Score = 94.3 bits (224), Expect = 4e-18
 Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 6/77 (7%)
 Frame = +2

Query: 260 MGNQNSCCCYRSPSPIRKDIVK------LEDYLPEGEVSSNNIQHISEREPDDGDIDPSQ 421
           MGN++SCC Y SP   RK++        LE++LPEG +S NN+QHISEREP+D D DPS 
Sbjct: 1   MGNKSSCCVYSSPQVGRKELGSEGVTRGLEEHLPEGGISVNNLQHISEREPEDWDSDPSL 60

Query: 422 DPMAGTIFMERSKASIE 472
            P AGTIFMERSK +IE
Sbjct: 61  HPCAGTIFMERSKQAIE 77


>UniRef50_Q4SKR3 Cluster: Chromosome undetermined SCAF14565, whole
           genome shotgun sequence; n=9; Euteleostomi|Rep:
           Chromosome undetermined SCAF14565, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 384

 Score = 90.2 bits (214), Expect = 7e-17
 Identities = 45/59 (76%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
 Frame = +3

Query: 525 RKAVPXSTIYLDDSTVSQPNLKNTVRCVALAIYYHIKNRMSERR--LDIFDEKLHPLSK 695
           RK    STI+LDDSTVSQPNLK T++CVALAIYYHIKNR  + R  LDIFDEKLHPLSK
Sbjct: 139 RKYSSCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDIDGRMLLDIFDEKLHPLSK 197



 Score = 44.8 bits (101), Expect = 0.003
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
 Frame = +2

Query: 263 GNQNSCCCYRSPSPIRKDIVKLEDYLPEGEVSSN----NIQHISEREPDDG---DIDPSQ 421
           G  N       P   + +  +LE YLPE E+S      N+QHIS+RE  D    + +PS 
Sbjct: 38  GEHNILLRVVEPQTPKNNHSRLEPYLPEPELSREDTGCNLQHISDRENLDDLPMEYNPSD 97

Query: 422 DPMAGTIFMERSKASIENGMTRKRSQHQ 505
            P A TIF+ +S+  +     R R + +
Sbjct: 98  HPRASTIFLSKSQTDVAVHSKRVREKRK 125


>UniRef50_Q8ND76 Cluster: Cyclin-Y; n=55; Eumetazoa|Rep: Cyclin-Y -
           Homo sapiens (Human)
          Length = 341

 Score = 89.4 bits (212), Expect = 1e-16
 Identities = 45/62 (72%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
 Frame = +3

Query: 525 RKAVPXSTIYLDDSTVSQPNLKNTVRCVALAIYYHIKNRMSERR--LDIFDEKLHPLSKE 698
           RK    STI+LDDSTVSQPNLK T++CVALAIYYHIKNR  + R  LDIFDE LHPLSK 
Sbjct: 96  RKYSSCSTIFLDDSTVSQPNLKYTIKCVALAIYYHIKNRDPDGRMLLDIFDENLHPLSKS 155

Query: 699 GV 704
            V
Sbjct: 156 EV 157



 Score = 54.4 bits (125), Expect = 4e-06
 Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
 Frame = +2

Query: 260 MGNQNSCCCYRSPSPIRKDIVKLEDYLPEGEVSSN----NIQHISEREPDDG---DIDPS 418
           MGN  SCC   SP   R    +LE Y P+ ++S      N+QHIS+RE  D    + +PS
Sbjct: 1   MGNTTSCCVSSSPKLRRNAHSRLESYRPDTDLSREDTGCNLQHISDRENIDDLNMEFNPS 60

Query: 419 QDPMAGTIFMERSKASI 469
             P A TIF+ +S+  +
Sbjct: 61  DHPRASTIFLSKSQTDV 77


>UniRef50_UPI0000D9F107 Cluster: PREDICTED: similar to cyclin fold
           protein 1; n=4; Macaca mulatta|Rep: PREDICTED: similar
           to cyclin fold protein 1 - Macaca mulatta
          Length = 497

 Score = 69.7 bits (163), Expect = 1e-10
 Identities = 33/58 (56%), Positives = 44/58 (75%)
 Frame = +3

Query: 525 RKAVPXSTIYLDDSTVSQPNLKNTVRCVALAIYYHIKNRMSERRLDIFDEKLHPLSKE 698
           RK    STI LD+STVSQP+L++T+  V  AIYY+IK+R + R L IF+E +HPLS+E
Sbjct: 159 RKYSSCSTILLDNSTVSQPDLRHTLESVTSAIYYNIKHRYANRSLAIFEESIHPLSQE 216


>UniRef50_A6NCM8 Cluster: Uncharacterized protein CCNYL3; n=4;
           Catarrhini|Rep: Uncharacterized protein CCNYL3 - Homo
           sapiens (Human)
          Length = 256

 Score = 68.9 bits (161), Expect = 2e-10
 Identities = 33/58 (56%), Positives = 44/58 (75%)
 Frame = +3

Query: 525 RKAVPXSTIYLDDSTVSQPNLKNTVRCVALAIYYHIKNRMSERRLDIFDEKLHPLSKE 698
           RK    STI LD+ST SQP+L++T+  VALAIYY+IK+R + R L IF+E +HPL +E
Sbjct: 14  RKYGSCSTILLDNSTASQPDLRHTLESVALAIYYNIKHRYANRSLAIFEEPVHPLPQE 71


>UniRef50_Q5T2Q4 Cluster: Uncharacterized protein C10orf21; n=7;
           Tetrapoda|Rep: Uncharacterized protein C10orf21 - Homo
           sapiens (Human)
          Length = 286

 Score = 46.8 bits (106), Expect = 8e-04
 Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +3

Query: 543 STIYLDDSTVSQPNLKNTVR-CVALAIYYHIKNRMSERRLDIFDEKLHPLS 692
           STI+LDDS  SQP+L  T++ C    I  +   R + R L IFDE+LHPL+
Sbjct: 49  STIFLDDSIASQPHLTMTLKSCDLGTILSYQAKRDAHRSLGIFDEQLHPLT 99


>UniRef50_Q6ZMK7 Cluster: FLJ00312 protein; n=14; Catarrhini|Rep:
           FLJ00312 protein - Homo sapiens (Human)
          Length = 663

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 24/47 (51%), Positives = 30/47 (63%)
 Frame = +3

Query: 543 STIYLDDSTVSQPNLKNTVRCVALAIYYHIKNRMSERRLDIFDEKLH 683
           STI+LDDST  Q  L  T+  V L I +HI  R ++R L I DE+LH
Sbjct: 171 STIFLDDSTAIQHYLTMTIISVTLEIPHHITQRDADRSLSIPDEQLH 217


>UniRef50_Q8TF27 Cluster: KIAA1975 protein; n=21; Amniota|Rep:
           KIAA1975 protein - Homo sapiens (Human)
          Length = 597

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +3

Query: 543 STIYLDDSTVSQPNLKNTVRCVALAIYYHIKNRMSERRLDIFDEKLH 683
           STI+LD ST SQ  L  T+  V L I++HI  R ++R L I DE+L+
Sbjct: 32  STIFLDGSTASQHYLIMTIISVTLEIHHHITERDADRSLTILDEQLY 78


>UniRef50_Q54ZC9 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 463

 Score = 39.5 bits (88), Expect = 0.12
 Identities = 18/56 (32%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
 Frame = +3

Query: 543 STIYLDDSTVSQPNLKNTVRCVALAIYYHIK--NRMSERRLDIFDEKLHPLSKEGV 704
           S++Y+  ST+S P+    +RC+A A+ YHI+  ++  ++ ++IF E+ +P++K  +
Sbjct: 232 SSLYIK-STLSTPDNDEILRCMANALLYHIERGSQFPQKTVEIFSEEKYPITKNKI 286


>UniRef50_UPI0000E49224 Cluster: PREDICTED: similar to UNC-89; n=2;
            Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
            UNC-89 - Strongylocentrotus purpuratus
          Length = 1763

 Score = 33.9 bits (74), Expect = 6.1
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = +2

Query: 299  SPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDP-MAGTIFMERSKASIEN 475
            SP  K   K++   PE      N++   E E   GD +P +D  +AG    E+ K   + 
Sbjct: 1179 SPTPKRATKMQPP-PENRPEPVNVKQNGE-ERKSGDDEPEEDDQLAGLSLSEKMKMFTQI 1236

Query: 476  GMTRKRSQHQIADNKLKKSSSXFY 547
               RK+ Q +       KSSS F+
Sbjct: 1237 SAIRKKEQEEEDKRSKSKSSSRFH 1260


>UniRef50_P32623 Cluster: Probable glycosidase CRH2 precursor; n=4;
           Saccharomycetales|Rep: Probable glycosidase CRH2
           precursor - Saccharomyces cerevisiae (Baker's yeast)
          Length = 467

 Score = 33.5 bits (73), Expect = 8.1
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
 Frame = +2

Query: 266 NQNSCCCYRSPSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDPMAG--T 439
           N+ +  CY  PS  +K+      Y    E  + +I    +    D D     DP  G  T
Sbjct: 294 NEVNITCYDPPSDTKKNGTSAYVYTSSSEFLAKDIAITDDEVMMDSDEGSGLDPHKGATT 353

Query: 440 IFMERSKASIENGMTRKRSQHQIADNKLKKSSS 538
              ++S +S     ++  S H  +  K  K+SS
Sbjct: 354 SSTQKSSSSTATSSSKTSSDHSSSTKKSSKTSS 386


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,969,204
Number of Sequences: 1657284
Number of extensions: 12504340
Number of successful extensions: 29301
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29282
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88182286632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)