Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K23
         (953 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    25   0.66 
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    25   0.66 
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    25   0.87 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   8.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   8.1  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 683 MKFLIKNI*PALRHSILYVIVNSKCYTPHSVFQIW 579
           + FL K     L+ +I+ V+V   C+TP+ V  IW
Sbjct: 263 LAFLGKAKVRTLKMTIIIVLVFFVCWTPYYVMCIW 297


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 683 MKFLIKNI*PALRHSILYVIVNSKCYTPHSVFQIW 579
           + FL K     L+ +I+ V+V   C+TP+ V  IW
Sbjct: 263 LAFLGKAKVRTLKMTIIIVLVFFVCWTPYYVMCIW 297


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 356 SSNNIQHISEREPDDGDIDPSQDP 427
           SS +   +SER+PD+ + + S+DP
Sbjct: 5   SSASNPAVSERDPDEDNSEDSKDP 28


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 266 NQNSCCCYRSPSPIRKDIVKLEDYLPEGEVSSNNI 370
           N N CCC R+ S  ++   K E+   + ++   NI
Sbjct: 186 NGNKCCCLRTCSSAKRP--KFENSSCDEDIDVTNI 218


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = +2

Query: 251 CKIMGNQNSCCCYRSPSPIRKDIVKLEDYLPEGEVSSNN 367
           C   G  N+C     P  +  +    E   P+G++S  N
Sbjct: 80  CDWKGKVNNCDKLEKPRKVLPNFKTDEPICPDGKLSCGN 118


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 287 YRSPSPIRKDIVKLEDYLPEG 349
           Y  P P+ KD  +  DY+P G
Sbjct: 624 YEMP-PVPKDFPQCGDYVPSG 643


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,629
Number of Sequences: 336
Number of extensions: 3801
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26892580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)