Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K23
         (953 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020...    30   3.1  

>03_02_0829 -
           11599665-11600364,11600853-11601076,11601786-11602000,
           11602300-11602377,11602593-11603907
          Length = 843

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 20/85 (23%), Positives = 39/85 (45%)
 Frame = +2

Query: 296 PSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDPMAGTIFMERSKASIEN 475
           P  +R+   +    L + E S  N +     E +D   +PS +P+   +F  R+   +EN
Sbjct: 219 PDNVRRFRDEKTSDLKDAEKSPINGREDDFAESEDDFDNPSSEPLV-RVFQNRNDMPVEN 277

Query: 476 GMTRKRSQHQIADNKLKKSSSXFYN 550
            +  +  +H +A  KL   +S  ++
Sbjct: 278 TVMNQTPEH-VASEKLASENSVSFS 301


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,041,315
Number of Sequences: 37544
Number of extensions: 327779
Number of successful extensions: 704
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)