Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K23
         (953 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15313-10|AAP68920.1|  355|Caenorhabditis elegans Hypothetical p...    84   1e-16
L15313-9|AAP68921.1|  357|Caenorhabditis elegans Hypothetical pr...    84   1e-16
AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine re...    29   4.9  
Z72506-7|CAA96620.2|  293|Caenorhabditis elegans Hypothetical pr...    29   6.5  
AF098997-9|AAC68720.1|  325|Caenorhabditis elegans Serpentine re...    29   6.5  
U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>L15313-10|AAP68920.1|  355|Caenorhabditis elegans Hypothetical
           protein ZK353.1a protein.
          Length = 355

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 37/63 (58%), Positives = 52/63 (82%), Gaps = 3/63 (4%)
 Frame = +3

Query: 525 RKAVPXSTIYLDDSTVSQPNLKNTVRCVALAIYYHI---KNRMSERRLDIFDEKLHPLSK 695
           RK+   STIY+DDSTVSQP+LKNT++C++LAIYYHI   KNR  ER ++IF+E+LHP+ +
Sbjct: 113 RKSSSCSTIYIDDSTVSQPHLKNTIKCISLAIYYHISNRKNRGHERLMEIFEERLHPIFR 172

Query: 696 EGV 704
           + +
Sbjct: 173 DPI 175



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +2

Query: 341 PEGEVSSNNIQHISEREPDDG-DIDPSQDPMAGTIFMERSKASIE 472
           P  E S+N + HISERE  +G + DPS +P A   FMERSK+ ++
Sbjct: 40  PRDETSTNFLPHISEREVTEGYEEDPSTNPTARPTFMERSKSEMK 84


>L15313-9|AAP68921.1|  357|Caenorhabditis elegans Hypothetical
           protein ZK353.1b protein.
          Length = 357

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 37/63 (58%), Positives = 52/63 (82%), Gaps = 3/63 (4%)
 Frame = +3

Query: 525 RKAVPXSTIYLDDSTVSQPNLKNTVRCVALAIYYHI---KNRMSERRLDIFDEKLHPLSK 695
           RK+   STIY+DDSTVSQP+LKNT++C++LAIYYHI   KNR  ER ++IF+E+LHP+ +
Sbjct: 115 RKSSSCSTIYIDDSTVSQPHLKNTIKCISLAIYYHISNRKNRGHERLMEIFEERLHPIFR 174

Query: 696 EGV 704
           + +
Sbjct: 175 DPI 177



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +2

Query: 341 PEGEVSSNNIQHISEREPDDG-DIDPSQDPMAGTIFMERSKASIE 472
           P  E S+N + HISERE  +G + DPS +P A   FMERSK+ ++
Sbjct: 42  PRDETSTNFLPHISEREVTEGYEEDPSTNPTARPTFMERSKSEMK 86


>AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine
           receptor, class v protein21 protein.
          Length = 317

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 135 KVLWAFYVL-FLCRLIISVYLVVTQCV*NDNEHS 233
           K  W + +  FLC  I+ VY+++  C+    +HS
Sbjct: 18  KFYWNYLIYYFLCIAILPVYILIVACILKSRKHS 51


>Z72506-7|CAA96620.2|  293|Caenorhabditis elegans Hypothetical
           protein F07A5.6 protein.
          Length = 293

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2

Query: 296 PSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDPMAGT 439
           P+P   +  + ED + E EV   +     E E DDG++   +DP+  T
Sbjct: 104 PTPDEPEFYEEED-VDESEVVEEDYAQEEEEEGDDGEVVEYEDPVVVT 150


>AF098997-9|AAC68720.1|  325|Caenorhabditis elegans Serpentine
           receptor, class i protein42 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = +1

Query: 115 FHKSRMIR--YYGPFMSYFCVGLLFPYI 192
           FH S +++  Y   FM+Y CVG+  PYI
Sbjct: 57  FHLSLLVQPMYLFRFMTYSCVGIAAPYI 84


>U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical protein
            C01B7.1a protein.
          Length = 935

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 296  PSPIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDP 427
            P P R DI KL+     G++    I+   + E +DG  +PS+ P
Sbjct: 879  PLPTRSDIEKLQILASGGDLKIGGIEKYLKEECEDG--EPSEAP 920


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,576,982
Number of Sequences: 27780
Number of extensions: 320325
Number of successful extensions: 765
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)