Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K21
(899 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 136 7e-31
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 123 7e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 93 1e-17
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 70 9e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 56 2e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 48 4e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 40 0.11
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 36 1.9
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: Co... 33 9.9
UniRef50_Q47H51 Cluster: NUDIX hydrolase; n=1; Dechloromonas aro... 33 9.9
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 33 9.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 136 bits (329), Expect = 7e-31
Identities = 72/109 (66%), Positives = 75/109 (68%)
Frame = +2
Query: 482 SKRPGTVKRPRCWRFSIGSAPLTSITXIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 661
SK+ T R RFSIGSAPLTSIT IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 662 CRLRIPVRLSPFGKRGAFS*LTHAXRYLSSGVXSFAPSWAVCPKPPVQP 808
CRL P PF R A+ L +S SFAPSWAVC PP P
Sbjct: 62 CRL--PDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 123 bits (296), Expect = 7e-27
Identities = 74/134 (55%), Positives = 83/134 (61%)
Frame = +2
Query: 314 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 493
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 494 GTVKRPRCWRFSIGSAPLTSITXIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLR 673
RPR RFSIGSAPLTSI DAQ+ GGETRQDYKD RRFPL APSCALLF P
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP--FG 131
Query: 674 IPVRLSPFGKRGAF 715
+PV +G+ +F
Sbjct: 132 LPVSFRCYGRGFSF 145
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +2
Query: 500 VKRPRCWRFSIGSAPLTSITXIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 661
V+ PR RFSIGSAPLTSIT DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 69.7 bits (163), Expect = 9e-11
Identities = 47/102 (46%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = -3
Query: 876 VAISRXLPGWTQDDXXPDKAXRSG*TGGFGHTAQLGANXXTPELRYLXA*VSYEKAPRFP 697
+A R PGWTQDD + RS G A A P+ + VSYEKAPRFP
Sbjct: 1 MAFLRVRPGWTQDDSY--RKGRSS-RAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFP 57
Query: 696 KGERRTGIR-KRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 574
KG++ + KRQGRNRRAHEGA+ K SL PPLT
Sbjct: 58 KGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 490 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 377
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 290 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 457
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 55.6 bits (128), Expect = 2e-06
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +2
Query: 389 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITX 562
C R Q R G +P+N I +R + + + P T F S PLT+IT
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 563 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 661
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 47.6 bits (108), Expect = 4e-04
Identities = 32/79 (40%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 575 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLRIPVRLSPFGKRGAFS*LTHAXRY-LSS 751
VR GETRQD K P P RIPV PF G+ + L+H+ +S+
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGSVA-LSHSSHSGISA 79
Query: 752 GVXSFAPSWAVCPKPPVQP 808
SFAPSWAV PP P
Sbjct: 80 RCRSFAPSWAVSKNPPFSP 98
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 92 DPDMIRYIDEFGQTTTRMQ 148
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 409 HSKAVIRLSTESGDNAGKNM 468
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 216 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 338
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 360 ERGSGRAPNTQTASPRALADSLMQ 289
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 672 GYLSAFLPSGSVALSHSS 725
GYLSAFLPSGSVALSHSS
Sbjct: 12 GYLSAFLPSGSVALSHSS 29
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 35.5 bits (78), Expect = 1.9
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3
Query: 834 YRLESNPVRXDLSPLAXXLG 893
YRLESNPVR DLSPLA G
Sbjct: 17 YRLESNPVRHDLSPLAAATG 36
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 499 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 377
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 250 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 86
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: CobN
- Silicibacter pomeroyi
Length = 1097
Score = 33.1 bits (72), Expect = 9.9
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 625 GETPGIFIVLSGFATSDLSVDXCDARQGGGAYGKTPATR 509
G++P +VLS F+ SDL +GGGA GK P R
Sbjct: 21 GQSPADLVVLS-FSDSDLGAFAAGWHRGGGAVGKLPTLR 58
>UniRef50_Q47H51 Cluster: NUDIX hydrolase; n=1; Dechloromonas
aromatica RCB|Rep: NUDIX hydrolase - Dechloromonas
aromatica (strain RCB)
Length = 261
Score = 33.1 bits (72), Expect = 9.9
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 616 PGIFIVLSGFATSDLSVDXCDARQGGGAYGKTPATRPFYGS--WPFAGLLLTCSFLRY 449
PG+F L+GF +++ C AR+ G A ++ S WPF L+ F Y
Sbjct: 155 PGVFSALAGFVEPGETLEECAAREVREEVGIEIANLRYFHSQPWPFPNSLMVAFFADY 212
>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
serovar O2|Rep: MobA protein - Listonella anguillarum
serovar O2
Length = 548
Score = 33.1 bits (72), Expect = 9.9
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 205 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLTKGRSAAAVPTI 44
NG+K N + + L++ CG L +L+ + + + LT+ +GR A P++
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSV 542
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,536,309
Number of Sequences: 1657284
Number of extensions: 16274935
Number of successful extensions: 44673
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 42588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44641
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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