Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K20
(898 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 38 0.011
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.6
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.6
07_03_1136 + 24218601-24218734,24218769-24219906 30 2.2
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 30 2.2
12_02_1174 - 26696869-26698191 30 2.9
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 26 3.3
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 5.0
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 5.0
11_06_0016 - 19284810-19284926,19285527-19286879 29 6.6
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 29 6.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 8.8
05_01_0142 - 940421-940701,941262-941574 28 8.8
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKXPXGXXPPPPXXGGXXPQMXKTPXKXXPXKTPXGKKXGXXG--K 367
P P PP P PPPP G P K P P K P G K
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374
Query: 368 GGPP 379
GGPP
Sbjct: 375 GGPP 378
Score = 31.9 bits (69), Expect = 0.71
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXP 624
PPPPGG G P P GG PP G P
Sbjct: 367 PPPPGGKKGGPPP-PPPKGGASRPPAAPGVP 396
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +2
Query: 245 PXGXXPPPPXXGGXXPQMXKTPXKXXPXKTPXGKKXGXXGKGGPP 379
P PPPP P P P P G KG PP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPP 355
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 11/47 (23%)
Frame = +1
Query: 532 PPPP---GGX*GXPXXGGAP--------PGGXXXPPVXGGXPXPKXG 639
PPPP GG G P GAP PGG PP G P P G
Sbjct: 1186 PPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGG 1232
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 8/46 (17%)
Frame = +1
Query: 532 PPPPGGX*G---XPXXGG-----APPGGXXXPPVXGGXPXPKXGGV 645
PPPPGG G P GG APP + G P P GG+
Sbjct: 1112 PPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGL 1157
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +2
Query: 218 GRXPPXXKXPXGXXPPPPXXGGXXPQMXKTPXKXXPXKTPXGKKXGXXGKGGPP 379
G PP P PPPP P P P + G G PP
Sbjct: 319 GAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPP 372
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 291 GXXPPXLGGGGXXPXGXFXXGG--SRPPHKGXXXGA 190
G P LGGGG P G GG S PP G GA
Sbjct: 95 GGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGA 130
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = -2
Query: 291 GXXPPXLGGGGXXPX---GXFXXGGSRPPHKGXXXG 193
G PP GGGG P G GG+RPP G G
Sbjct: 105 GARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGG 140
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 230 PXXKXPX-GXXPPPPXXGGXXPQMXKTPXKXXPXKTPXGKKXGXXGKGGPP 379
P K P G P PP G P+ P K P P K G K GPP
Sbjct: 176 PKPKPPKPGPKPKPPKPG---PKPKPKPPKPGPKPKPKPPKPGPKPKPGPP 223
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPPKXAP 754
P K PP PP PPPP P
Sbjct: 143 PVKPQPPPSLPPPPPPPPPPPP 164
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPPKXAPXXXXXXXXXXXXXXXXXXXXXGPXPPP 835
P PP PP PPPP P P PPP
Sbjct: 177 PKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPP 225
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 25.8 bits (54), Expect(2) = 3.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 704 PPGGXPPXXPPPPK 745
PP PP PPPPK
Sbjct: 353 PPPPPPPPPPPPPK 366
Score = 22.2 bits (45), Expect(2) = 3.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 719 PPXXPPPPKXAP 754
PP PPPP P
Sbjct: 373 PPPPPPPPPSVP 384
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +2
Query: 686 APXKXXPPG--GXPPXXPPPPKXAP 754
AP PPG G PP PPPP P
Sbjct: 928 APPPPPPPGKPGGPPPPPPPPGSLP 952
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXGGVK 648
PP P G P G P G PP G P GG K
Sbjct: 922 PPRPPGAPPPPPPPGKPGGPPPPPPPPGSLPRNLAGGDK 960
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 704 PPGGXPPXXPPPPKXAPXXXXXXXXXXXXXXXXXXXXXGPXPPP 835
PP PP PPPP AP G PPP
Sbjct: 264 PPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPP 307
>11_06_0016 - 19284810-19284926,19285527-19286879
Length = 489
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 686 APXKXXPPGGXP-PXXPPPPKXAP 754
AP + PP P P PPPP+ AP
Sbjct: 78 APDQEPPPSPPPPPPPPPPPRPAP 101
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 686 APXKXXPPGGXPPXXPPPP 742
AP PP PP PPPP
Sbjct: 80 APENALPPSSPPPPSPPPP 98
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKXPXGXXPPPPXXGGXXP 292
P P +G PP P PPPP G P
Sbjct: 32 PPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPP 64
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXG 639
PPPPG P G PP PP G P P+ G
Sbjct: 41 PPPPGAY--PPPPGAYPPPPGAYPPPPGAYP-PQHG 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,714,015
Number of Sequences: 37544
Number of extensions: 275975
Number of successful extensions: 2561
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2204
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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