Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K20
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.12
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.12
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.12
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.21
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.21
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.64
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.64
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.64
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.64
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.6
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.4
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.4
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.4
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.4
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 3.4
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 3.4
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 4.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 4.5
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 4.5
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.0
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 29 6.0
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.0
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 25 6.3
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 7.9
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 7.9
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 7.9
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 7.9
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 7.9
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 7.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 PPPP--GGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXGG 642
PPPP G P G+PP G PP GG P P G
Sbjct: 289 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 327
Score = 31.9 bits (69), Expect = 0.64
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGA---PPGGXXXPPVXGGXPXPKXGG 642
PPPP P G+ PP G PP GG P P G
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Frame = +2
Query: 191 APXXXPLWGGRXPPXX----KXPXGXXPPPPXXGGXXPQMXKTPXKXXPXK--TPXGKKX 352
+P P G PP P G PPPP G P +P P + P G
Sbjct: 254 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Query: 353 GXXGKGGPP 379
G PP
Sbjct: 314 PPQAGGSPP 322
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPP--GGXXXPPVXGGXPXP 630
PPPP G P G PP G PP G P P
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP G P GG+PP PP G P P
Sbjct: 273 PPPPTGSPPPPPAGGSPP-----PPRAGSPPPP 300
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXX--PPVXGGXPXPKXGG 642
PPPP G P G+PP P G P P+ GG
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXG 639
PPPP G P G+ G PP G P P+ G
Sbjct: 237 PPPPPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTG 270
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 704 PPGGXPPXXPPPPKXAP 754
PP G PP PPPPK +P
Sbjct: 232 PPAGSPP-PPPPPKGSP 247
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 PPPP--GGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXGG 642
PPPP G P G+PP G PP GG P P G
Sbjct: 310 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 348
Score = 31.9 bits (69), Expect = 0.64
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGA---PPGGXXXPPVXGGXPXPKXGG 642
PPPP P G+ PP G PP GG P P G
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Frame = +2
Query: 191 APXXXPLWGGRXPPXX----KXPXGXXPPPPXXGGXXPQMXKTPXKXXPXK--TPXGKKX 352
+P P G PP P G PPPP G P +P P + P G
Sbjct: 275 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Query: 353 GXXGKGGPP 379
G PP
Sbjct: 335 PPQAGGSPP 343
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPP--GGXXXPPVXGGXPXP 630
PPPP G P G PP G PP G P P
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP G P GG+PP PP G P P
Sbjct: 294 PPPPTGSPPPPPAGGSPP-----PPRAGSPPPP 321
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXX--PPVXGGXPXPKXGG 642
PPPP G P G+PP P G P P+ GG
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXG 639
PPPP G P G+ G PP G P P+ G
Sbjct: 258 PPPPPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTG 291
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 704 PPGGXPPXXPPPPKXAP 754
PP G PP PPPPK +P
Sbjct: 253 PPAGSPP-PPPPPKGSP 268
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 PPPP--GGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXGG 642
PPPP G P G+PP G PP GG P P G
Sbjct: 295 PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 333
Score = 31.9 bits (69), Expect = 0.64
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGA---PPGGXXXPPVXGGXPXPKXGG 642
PPPP P G+ PP G PP GG P P G
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Frame = +2
Query: 191 APXXXPLWGGRXPPXX----KXPXGXXPPPPXXGGXXPQMXKTPXKXXPXK--TPXGKKX 352
+P P G PP P G PPPP G P +P P + P G
Sbjct: 260 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Query: 353 GXXGKGGPP 379
G PP
Sbjct: 320 PPQAGGSPP 328
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPP--GGXXXPPVXGGXPXP 630
PPPP G P G PP G PP G P P
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP G P GG+PP PP G P P
Sbjct: 279 PPPPTGSPPPPPAGGSPP-----PPRAGSPPPP 306
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXX--PPVXGGXPXPKXGG 642
PPPP G P G+PP P G P P+ GG
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXG 639
PPPP G P G+ G PP G P P+ G
Sbjct: 243 PPPPPPPKGSPPLAGS--GSPPPPPAAGSPPPPRTG 276
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 704 PPGGXPPXXPPPPKXAP 754
PP G PP PPPPK +P
Sbjct: 238 PPAGSPP-PPPPPKGSP 253
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPG---GXXXPPVXGGXPXPKXGGVK 648
PPPPG G P G PP PP GG P P G++
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 342
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP G P GG PP GG P P
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +2
Query: 227 PPXXKXPXGX-XPPPPXXGGXXPQMXKTPXKXXPXKTPXG 343
PP + P G PPPP P M P P P G
Sbjct: 338 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 377
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPG---GXXXPPVXGGXPXPKXGGVK 648
PPPPG G P G PP PP GG P P G++
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 352
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP G P GG PP GG P P
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +2
Query: 227 PPXXKXPXGX-XPPPPXXGGXXPQMXKTPXKXXPXKTPXG 343
PP + P G PPPP P M P P P G
Sbjct: 348 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 387
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.64
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKXPXGXXPPPPXXGGXXPQ--MXKTPXKXXPXKTPXGKKXGXXGK 367
P P+ GG PP PPPP G PQ KTP K GK G +
Sbjct: 95 PPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNPALAKL-GGKNPGTVDR 153
Query: 368 G 370
G
Sbjct: 154 G 154
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKXPXGXXPPPPXXGGXXP 292
P P++ G PP G PPPP G P
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPP 116
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 215 GGRXPPXXKXPXGXXPPPPXXGGXXP 292
GG PP G PPPP GG P
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPP 106
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +2
Query: 206 PLWGGRXPPXXKXPXGXXPPPPXXGGXXPQMXKTPXKXXPXKTPXGKKXGXXGKGGPP 379
P+ GG PP P PPPP G P + P P P G G PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP---PPPPPPGGLPPISGGPPPPP 762
Score = 31.5 bits (68), Expect = 0.85
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPP 742
P PPGG PP PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP G P G PP PP GG P P
Sbjct: 742 PPPPPPPGGLPPISGGPP---PPPPPPGGCPPP 771
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 544 GGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXGG 642
GG P G PP PP+ GG P P G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKXPXGXX----PPPPXXGGXXPQMXKTPXKXXPXKTP 337
P P GG PP P G PPPP G P P P K P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 7/69 (10%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKX---PXGXXPPPPXXGGXXPQM--XKTPXKXXPXKTPXGKKXGX 358
P P+ GG PP P PPPP G P + P P P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 359 XG--KGGPP 379
G KGGPP
Sbjct: 777 PGGFKGGPP 785
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGG--XXXPPVXGGXPXPKXGGVKXXXXXXXXXXXXXXXXXXX 705
PP GG P GG PP PP GG P P GG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPG 778
Query: 706 XXXXXPXXPPPP 741
P PPPP
Sbjct: 779 GFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +2
Query: 206 PLWGGRXPPXXKXPXGXXPPPPXXGGXXPQMXKTPXKXXPXKTPXGKKXGXXGKGGPP 379
P+ GG PP P PPPP G P + P P P G G PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP---PPPPPPGGLPPISGGPPPPP 762
Score = 31.5 bits (68), Expect = 0.85
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPP 742
P PPGG PP PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP G P G PP PP GG P P
Sbjct: 742 PPPPPPPGGLPPISGGPP---PPPPPPGGCPPP 771
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 544 GGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXGG 642
GG P G PP PP+ GG P P G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKXPXGXX----PPPPXXGGXXPQMXKTPXKXXPXKTP 337
P P GG PP P G PPPP G P P P K P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 7/69 (10%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKX---PXGXXPPPPXXGGXXPQM--XKTPXKXXPXKTPXGKKXGX 358
P P+ GG PP P PPPP G P + P P P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 359 XG--KGGPP 379
G KGGPP
Sbjct: 777 PGGFKGGPP 785
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGG--XXXPPVXGGXPXPKXGGVKXXXXXXXXXXXXXXXXXXX 705
PP GG P GG PP PP GG P P GG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPG 778
Query: 706 XXXXXPXXPPPP 741
P PPPP
Sbjct: 779 GFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +2
Query: 206 PLWGGRXPPXXKXPXGXXPPPPXXGGXXPQMXKTPXKXXPXKTPXGKKXGXXGKGGPP 379
P+ GG PP P PPPP G P + P P P G G PP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP---PPPPPPGGLPPISGGPPPPP 345
Score = 31.5 bits (68), Expect = 0.85
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPP 742
P PPGG PP PPPP
Sbjct: 342 PPPPPPPGGCPPPPPPPP 359
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP G P G PP PP GG P P
Sbjct: 325 PPPPPPPGGLPPISGGPP---PPPPPPGGCPPP 354
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 544 GGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXGG 642
GG P G PP PP+ GG P P G
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPG 316
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKXPXGXX----PPPPXXGGXXPQMXKTPXKXXPXKTP 337
P P GG PP P G PPPP G P P P K P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 7/69 (10%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKX---PXGXXPPPPXXGGXXPQM--XKTPXKXXPXKTPXGKKXGX 358
P P+ GG PP P PPPP G P + P P P
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 359 XG--KGGPP 379
G KGGPP
Sbjct: 360 PGGFKGGPP 368
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/72 (30%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGG--XXXPPVXGGXPXPKXGGVKXXXXXXXXXXXXXXXXXXX 705
PP GG P GG PP PP GG P P GG
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPG 361
Query: 706 XXXXXPXXPPPP 741
P PPPP
Sbjct: 362 GFKGGPPPPPPP 373
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAP---PGGXXXPPVXG 615
PPPPGG G P G P PGG PP G
Sbjct: 411 PPPPGGP-GAPGSYGPPQGGPGGFGPPPPGG 440
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKXPXGXXPPPPXXGGXXPQMXKTPXKXXPXKTPXGKKXGXXGKGG 373
P P++ PP P PPP G P P P K P G
Sbjct: 696 PGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGA 755
Query: 374 PP 379
PP
Sbjct: 756 PP 757
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 532 PPPPGGX*GXPXXG-GAPPGGXXXPPVXGGXP 624
PPPP G P G GAPP PP G P
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 532 PPPPGGX*GXPXXG-GAPPGGXXXPPVXGGXP 624
PPPP G P G GAPP PP G P
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 489
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXP 624
PPPP G P G PP PP+ GG P
Sbjct: 1468 PPPPRGM-NSPMRGMPPPMRGGGPPMRGGPP 1497
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXG 639
PPP G G P G PP P GG P P G
Sbjct: 1482 PPPMRG--GGPPMRGGPPMRGGPPMFRGGPPGPGRG 1515
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXP 624
P P G G P GG P G PP G P
Sbjct: 228 PAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXP 624
P P G G P GG P G PP G P
Sbjct: 228 PAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXP 624
P P G G P GG P G PP G P
Sbjct: 228 PAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXP 624
P P G G P GG P G PP G P
Sbjct: 228 PAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 686 APXKXXPPGGXPPXXPPPP 742
AP PGG PP PPPP
Sbjct: 1002 APKAPAGPGGPPPPPPPPP 1020
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 686 APXKXXPPGGXPPXXPPPP 742
AP PGG PP PPPP
Sbjct: 241 APKAPAGPGGPPPPPPPPP 259
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXGG 642
PPP G G P PPGG PP GG P G
Sbjct: 154 PPPLMGGGGDPR---GPPGGMGGPPGHGGMGGPPGHG 187
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXGG 642
PPP G G P PPGG PP GG P G
Sbjct: 434 PPPLMGGGGDPR---GPPGGMGGPPGHGGMGGPPGHG 467
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PP P G G P GAP GG P G P P
Sbjct: 257 PPGPAGPPGPPGNNGAPGGGYGVGP--PGPPGP 287
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAP-PGGXXXPPVXGGXP 624
PP P G G P G P P G PP G P
Sbjct: 179 PPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNP 210
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAP-PGGXXXPPVXGGXP 624
PP P G G P G P P G PP G P
Sbjct: 179 PPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNP 210
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPPKXAP 754
P PPGG P PP P+ AP
Sbjct: 164 PGPAGPPGGPGPPGPPGPEGAP 185
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP G GAPP PPV G P P
Sbjct: 218 PPPPIGGIAPVNAHGAPP-PPPLPPVGAGAPPP 249
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP G GAPP PPV G P P
Sbjct: 204 PPPPIGGIAPVNAHGAPP-PPPLPPVGAGAPPP 235
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP G GAPP PPV G P P
Sbjct: 204 PPPPIGGIAPVNAHGAPP-PPPLPPVGAGAPPP 235
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PPPP GAPP PP+ GG P P
Sbjct: 562 PPPPPPL--PQNLSGAPPPPPPPPPMLGGPPPP 592
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 24.6 bits (51), Expect(2) = 6.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 719 PPXXPPPPKXAP 754
PP PPPP+ AP
Sbjct: 85 PPPPPPPPQPAP 96
Score = 22.6 bits (46), Expect(2) = 6.3
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPP 742
P P PP PPPP
Sbjct: 74 PYAQSPIAAVPPPPPPPP 91
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 535 PPPGGX*GXPXXGGAPPGGXXXP-PVXGGXPXPKXGGVK 648
P P G P APPGG P P GG P G++
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMR 796
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 535 PPPGGX*GXPXXGGAPPGGXXXP-PVXGGXPXPKXGGVK 648
P P G P APPGG P P GG P G++
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMR 796
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 535 PPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PP GG G GAPP G P+ P P
Sbjct: 506 PPSGGPPGPFDPSGAPPSGMPPVPLPTDLPIP 537
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 683 RAPXKXXPPGGXPPXXPPPPKXAP 754
R P PP G PP PPPP+ P
Sbjct: 68 RPPWHRRPPWGLPP-PPPPPEPEP 90
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 535 PPPGGX*GXPXXGGAPPGGXXXP-PVXGGXPXPKXGGVK 648
P P G P APPGG P P GG P G++
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMR 796
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 535 PPPGGX*GXPXXGGAPPGGXXXP-PVXGGXPXPKXGGVK 648
P P G P APPGG P P GG P G++
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMR 796
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +1
Query: 532 PPPPGGX*GX-PXXGGAPPGGXXXPPVXGGXP 624
PP P G G P GG P G PP G P
Sbjct: 191 PPGPAGADGNTPSGGGEGPAGPPGPPGPAGNP 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,971,774
Number of Sequences: 27780
Number of extensions: 172532
Number of successful extensions: 1646
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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