Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K20
(898 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g15830.1 68414.m01900 expressed protein 36 0.028
At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 33 0.19
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 33 0.26
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 33 0.26
At3g50180.1 68416.m05486 hypothetical protein 32 0.59
At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associa... 31 1.0
At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associa... 31 1.0
At5g45350.1 68418.m05567 proline-rich family protein contains pr... 30 1.8
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 29 4.2
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 29 4.2
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 29 4.2
At1g61080.1 68414.m06877 proline-rich family protein 29 4.2
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 29 4.2
At1g31750.1 68414.m03895 proline-rich family protein contains pr... 29 4.2
At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associa... 29 5.5
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 29 5.5
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 29 5.5
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 25 5.8
At2g27390.1 68415.m03306 proline-rich family protein contains pr... 28 7.3
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 28 7.3
At5g59270.1 68418.m07427 lectin protein kinase family protein co... 28 9.7
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 28 9.7
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 28 9.7
At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family... 28 9.7
>At1g15830.1 68414.m01900 expressed protein
Length = 483
Score = 36.3 bits (80), Expect = 0.028
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPP--GGXXXPPVXGGXPXPKXGG 642
PPP G G P GAPP G PV G P PK GG
Sbjct: 139 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGG 177
Score = 36.3 bits (80), Expect = 0.028
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPP--GGXXXPPVXGGXPXPKXGG 642
PPP G G P GAPP G PV G P PK GG
Sbjct: 171 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPPPKRGG 209
Score = 36.3 bits (80), Expect = 0.028
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPP--GGXXXPPVXGGXPXPKXGG 642
PPP G G P GAPP G PV G P PK GG
Sbjct: 203 PPPKRGGGGEPVIPGAPPPKRGGGGEPVIPGAPLPKRGG 241
Score = 35.5 bits (78), Expect = 0.048
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPP--GGXXXPPVXGGXPXPKXGG 642
PPP G G P GAPP G PV G P PK GG
Sbjct: 123 PPPIRGGGGEPAIPGAPPPKRGGGGEPVIPGAPPPKRGG 161
>At3g15000.1 68416.m01897 expressed protein similar to DAG protein
(required for chloroplast differentiation and palisade
development) GB:Q38732 [Antirrhinum majus]
Length = 395
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPG---GXXXPPVXGGXPXPKXGGV 645
PP G P GGAPP G PP GG P P+ G V
Sbjct: 311 PPQNYGGTPPPNYGGAPPANNMGGAPPPNYGGGPPPQYGAV 351
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Frame = +1
Query: 532 PPPPGGX*GX--PXXGGAPP----GGXXXPPVXGGXPXPKXGG 642
PPPP G P GAPP GG P GG P P GG
Sbjct: 283 PPPPNNMGGPRHPPPYGAPPQNNMGGPRPPQNYGGTPPPNYGG 325
Score = 31.5 bits (68), Expect = 0.78
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPG--GXXXPPVXGGXPXPKXGG 642
PP GG GGAPP G PP G P P+ GG
Sbjct: 320 PPNYGGAPPANNMGGAPPPNYGGGPPPQYGAVPPPQYGG 358
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 227 PPXXKXPXGXXPPPPXXGGXXP 292
PP + P G PPPP GG P
Sbjct: 241 PPPQRPPMGGPPPPPHIGGSAP 262
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKXPXGXXPPPPXXGGXXP 292
P P GG PP G PPPP GG P
Sbjct: 242 PPQRPPMGG--PPPPPHIGGSAPPPPHMGGSAP 272
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 535 PPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXG 639
PPP G G G PP G P+ G P P G
Sbjct: 196 PPPSGMHGGHLSNGPPPSGMPGGPLSNGPPPPMMG 230
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 535 PPPGGX*GXPXXGGAPPGGXXXPPVXGGXP 624
PPP G G P G PP G + G P
Sbjct: 182 PPPSGMPGGPLSNGPPPSGMHGGHLSNGPP 211
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 538 PPGGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXGGV 645
PPGG P G P G PP+ G P G+
Sbjct: 152 PPGGVPSGPPSGARPIGFGSPPPMGPGMSMPPPSGM 187
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXP 630
PP PGG P PPGG PP GG P P
Sbjct: 672 PPLPGGG---PPPPPPPPGGGPPPPPGGGPPPP 701
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 206 PLWGGRXPPXXKXPXGXXPPPPXXGGXXP 292
PL GG PP P G PPPP G P
Sbjct: 673 PLPGGGPPPPPPPPGGGPPPPPGGGPPPP 701
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2
Query: 704 PPGGXPPXXPPPP 742
PPGG PP PPPP
Sbjct: 693 PPGGGPPPPPPPP 705
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 707 PGGXPPXXPPPPKXAP 754
PGG PP PPPP P
Sbjct: 675 PGGGPPPPPPPPGGGP 690
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPPVXGGXPXPKXGGVK 648
PPPP G P GG PP PP G GG K
Sbjct: 682 PPPPPGGGPPPPPGGGPP---PPPPPPGALGRGAGGGNK 717
>At3g50180.1 68416.m05486 hypothetical protein
Length = 588
Score = 31.9 bits (69), Expect = 0.59
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 683 RAPXKXXPPGGXPPXXPPPPKXAP 754
RAP PP PP PPPP+ P
Sbjct: 23 RAPPPQPPPPPPPPPPPPPPRLGP 46
>At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPG-GXXXPP-VXGGXPXPKXG 639
PPPP G G P G PP G PP G P P+ G
Sbjct: 167 PPPPFGGQGPPMGRGPPPPYGMRPPPQQFSGPPPPQYG 204
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Frame = +2
Query: 206 PLWGGRXPPXXKXPX---GXXPPPPXX-GGXXPQMXKTPXKXXPXKTPXGKKXGXXGKGG 373
P +GG+ PP + P G PPP G PQ + P P G G G
Sbjct: 169 PPFGGQGPPMGRGPPPPYGMRPPPQQFSGPPPPQYGQRPMIPPPGGMMRGPPPPPHGMQG 228
Query: 374 PP 379
PP
Sbjct: 229 PP 230
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 227 PPXXKXPXGXXPPPPXXGGXXPQMXKTPXKXXPXKTP 337
PP + P PPPP GG P M + P + P
Sbjct: 156 PPIIRPPGQMLPPPPF-GGQGPPMGRGPPPPYGMRPP 191
>At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPG-GXXXPP-VXGGXPXPKXG 639
PPPP G G P G PP G PP G P P+ G
Sbjct: 167 PPPPFGGQGPPMGRGPPPPYGMRPPPQQFSGPPPPQYG 204
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Frame = +2
Query: 206 PLWGGRXPPXXKXPX---GXXPPPPXX-GGXXPQMXKTPXKXXPXKTPXGKKXGXXGKGG 373
P +GG+ PP + P G PPP G PQ + P P G G G
Sbjct: 169 PPFGGQGPPMGRGPPPPYGMRPPPQQFSGPPPPQYGQRPMIPPPGGMMRGPPPPPHGMQG 228
Query: 374 PP 379
PP
Sbjct: 229 PP 230
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 227 PPXXKXPXGXXPPPPXXGGXXPQMXKTPXKXXPXKTP 337
PP + P PPPP GG P M + P + P
Sbjct: 156 PPIIRPPGQMLPPPPF-GGQGPPMGRGPPPPYGMRPP 191
>At5g45350.1 68418.m05567 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 177
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPP----GGXXXPPVXGGXP 624
PP PGG P GG PP GG P GG P
Sbjct: 55 PPAPGGYPPAPGYGGYPPAPGYGGYPPAPGHGGYP 89
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPPKXAP 754
P + PP PP PPPP AP
Sbjct: 369 PRRSPPPLQTPPPPPPPPPLAP 390
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKXPXGXXPPPPXXGGXXPQMXKTP 310
P P GG PP P G PPPP G P+ + P
Sbjct: 391 PAPPPGSGGPKPPPPPGPKGPRPPPPMSLG--PKAPRPP 427
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 194 PXXXPLWGGRXPPXXKXPXGXXPPPPXXGGXXPQMXKTP 310
P P GG PP P G PPPP G P+ + P
Sbjct: 391 PAPPPGSGGPKPPPPPGPKGPRPPPPMSLG--PKAPRPP 427
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 227 PPXXKXPXGXXPPPPXXGGXXPQMXKTPXKXXPXKTPXGKKXGXXGKGGPP 379
PP PPPP P P +P G G GGPP
Sbjct: 541 PPPGTAAAPPPPPPPPGTQAAPPPPPPPPMQNRAPSPPPMPMGNSGSGGPP 591
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 227 PPXXKXPXGXXPPPPXXGGXXPQMXKTPXKXXPXKTPXGKKXGXXGKGGPP 379
PP PPPP P P K P P G G G PP
Sbjct: 375 PPGPANQTSPPPPPPPSAAAPPP--PPPPKKGPAAPPPPPPPGKKGAGPPP 423
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 686 APXKXXPPGGXPPXXPPPPKXAP 754
+P PP P PPPPK P
Sbjct: 383 SPPPPPPPSAAAPPPPPPPKKGP 405
>At1g31750.1 68414.m03895 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 176
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 532 PPPPGGX*GXPXXGGAPPGGXXXPP 606
PPPP G P GG PP G PP
Sbjct: 30 PPPPQG--AYPPPGGYPPQGYPPPP 52
>At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|P27048 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Mus musculus}
Length = 254
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 215 GGRXPPXXKXPXGXXPPPPXXGG-XXPQMXKTP 310
GG PP P PPPP GG P M P
Sbjct: 171 GGPPPPYGMRPPYPGPPPPQYGGQQRPMMIPPP 203
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/56 (30%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Frame = +2
Query: 227 PPXXKXPXGXXPPPPXXGGXXPQMXKTPXKXXPXKTP-----XGKKXGXXGKGGPP 379
PP G PPPP P ++P P + P G G GGPP
Sbjct: 46 PPPMMPGSGPRPPPPFGQSPQPFPQQSPSYGAPQRGPSPMSRPGPPAGMARPGGPP 101
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 532 PPPPGGX*GXPXX-GGAPPGGXXXPPVXGGXP 624
PPP GG G P GG GG PPV P
Sbjct: 65 PPPHGGKGGGPPHHGGGGGGGGKSPPVVRPPP 96
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 25.0 bits (52), Expect(2) = 5.8
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPP 742
P PP PP PPPP
Sbjct: 590 PLAQPPPPRPPPPPPPPP 607
Score = 21.8 bits (44), Expect(2) = 5.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 719 PPXXPPPPKXAP 754
PP PPPP P
Sbjct: 641 PPPPPPPPTRIP 652
>At2g27390.1 68415.m03306 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 683 RAPXKXXPPGGXPPXXPPPPKXAP 754
R P PP PP PPPP P
Sbjct: 87 RLPPPLLPPPEEPPREPPPPPPPP 110
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPPKXAP 754
P PP PP PPPP+ P
Sbjct: 81 PPPSPPPSPPPPQLPPPPQLPP 102
>At5g59270.1 68418.m07427 lectin protein kinase family protein
contains Pfam domains PF00139: Legume lectins beta
domain and PF00069: Protein kinase domain
Length = 668
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPPKXAP 754
P PP PP PPPP P
Sbjct: 262 PPNRPPPPSSPPPPPPPPPTPP 283
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPPKXAPXXXXXXXXXXXXXXXXXXXXXGPXPPP 835
P PP PP PPPP P P PPP
Sbjct: 382 PPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPP 430
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPPKXAP 754
P PP PP PPPP P
Sbjct: 68 PPTSPPPPSPPPPSPPPPSPPP 89
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPPKXAP 754
P PP PP PPPP P
Sbjct: 73 PPPSPPPPSPPPPSPPPPSPPP 94
>At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family
protein contains proline-rich domains,
INTERPRO:IPR000694
Length = 144
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 689 PXKXXPPGGXPPXXPPPPKXAP 754
P PP PP PPPP P
Sbjct: 61 PPSPPPPSPPPPACPPPPALPP 82
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,518,311
Number of Sequences: 28952
Number of extensions: 157384
Number of successful extensions: 1322
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2110422216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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