Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K19
(906 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|... 69 7e-13
SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces pombe... 52 1e-07
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 28 1.6
SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase [UDP-... 27 3.7
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 26 8.5
SPCC1672.12c |||DUF410 family protein|Schizosaccharomyces pombe|... 26 8.5
SPBC18H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 26 8.5
SPCC1682.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 8.5
SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11 |Schizosacc... 26 8.5
>SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 156
Score = 69.3 bits (162), Expect = 7e-13
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = +2
Query: 269 IKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKL 448
+ VG LP L+E+ P V E + K ++ VPGAFTP CS + +PGY+ N +
Sbjct: 2 VAVGSTLPKVTLWENKPEEVV---EFPSQGKFIIVGVPGAFTPPCS-SQVPGYIANEKQF 57
Query: 449 KSDGVAEIVCVSVNDPYVMAAWGAQHN--TKGKVRMLADPSGNFIKGSGPGHQSA 607
+ G++ I V+VND +V AW + + V +AD +G F K G ++
Sbjct: 58 AAKGISGIYVVAVNDVFVTKAWKKSFDGGEQSGVHFVADWNGEFTKAFDAGFDAS 112
Score = 32.7 bits (71), Expect = 0.074
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 576 SRALDLGTNLPPL-GGFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 725
++A D G + L G RSKR++ V+ + KV + +E + T + S ADK+
Sbjct: 102 TKAFDAGFDASGLLGPLRSKRYAAVVENGKVVKVFIENEVTDVDISSADKV 152
>SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 195
Score = 52.0 bits (119), Expect = 1e-07
Identities = 34/107 (31%), Positives = 55/107 (51%)
Frame = +2
Query: 269 IKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKL 448
I+VGD +P L D + + ++TA K +V+FA P A TPGC+K G+ N K+
Sbjct: 46 IQVGDVIPDITL-PDEDGTSIRLRDITANKGLVIFAYPKASTPGCTKQGC-GFRDNYPKI 103
Query: 449 KSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKGSG 589
++ E++ +S + A+ + N +L+DP G IK G
Sbjct: 104 QASDY-EVLGLSFDTSKAQKAFKDKQNF--PYHLLSDPKGELIKKLG 147
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 323 NKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVA--EIVCVSVND 493
NK + EL KV++ + C K P Y AD+L+ DG++ E+ C D
Sbjct: 28 NKEGLNELITADKVLMVKFYAPWCGHC-KALAPEYESAADELEKDGISLVEVDCTEEGD 85
>SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase
[UDP-forming]|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 475 HYFSNSIRFQFICVLYVSRQVCFRTSRGEG 386
H+ S+RF+ + LY VC TS +G
Sbjct: 365 HFLHKSVRFEELVALYNVSDVCLITSTRDG 394
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 193 YPWHYRIHQSSVSASTSHFTIKHGTN 270
+P + H +S+S+ HF+++H N
Sbjct: 653 FPQALKAHMNSISSPKRHFSLRHKKN 678
>SPCC1672.12c |||DUF410 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 303
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 29 ESLRFE-LDIKVIKVVKVMNFYHLLTYDRYNK 121
E++ F+ D V K MNF HLL + Y K
Sbjct: 209 ENMSFDGKDFPVFKEYPQMNFLHLLIFTAYRK 240
>SPBC18H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 242
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3
Query: 163 VEVFTMVVTLLIIYFVISIV 104
V +FT V+T++I+YF S++
Sbjct: 117 VLIFTYVMTVIIVYFSFSLI 136
>SPCC1682.06 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 238
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3
Query: 163 VEVFTMVVTLLIIYFVISIV 104
V +FT V+T++I+YF S++
Sbjct: 117 VLIFTYVMTVIIVYFSFSLI 136
>SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1284
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -3
Query: 463 NSIRFQFICVLYVSRQVCFRTSRG 392
NSI+ F+C++Y+S+ + ++ G
Sbjct: 522 NSIKSPFLCLIYISKDMEYKLLHG 545
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,434,689
Number of Sequences: 5004
Number of extensions: 72139
Number of successful extensions: 212
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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