Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K19
(906 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 26 0.41
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 1.3
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 2.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.8
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 3.8
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 3.8
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 3.8
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 3.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 3.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.8
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 26.2 bits (55), Expect = 0.41
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 104 YDRYNKINNK*GNYHSKNFYLLMFL 178
Y YN NN NY+ K +Y + ++
Sbjct: 91 YSNYNNYNNNYNNYNKKLYYNINYI 115
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.6 bits (51), Expect = 1.3
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 68 VVKVMNFYHLLTYDRYNKINNK*GNYHSKNFY 163
+ + N Y Y+ YN NN N ++K Y
Sbjct: 315 ISSLSNNYKYSNYNNYNNYNNNNYNNYNKKLY 346
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.4 bits (48), Expect = 2.9
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 50 DIKVIKVVKVMNFYHLLTYDRYNKI 124
D KVIK KV+ Y D Y I
Sbjct: 218 DFKVIKATKVLKMYACCPNDTYPMI 242
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 104 YDRYNKINNK*GNYHSKNFYLLMFL 178
Y+ YN NN N + K +Y + ++
Sbjct: 334 YNNYNNYNNNYNNNYKKLYYNINYI 358
Score = 22.6 bits (46), Expect = 5.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 104 YDRYNKINNK*GNYHSKN 157
Y YN NN NY++ N
Sbjct: 324 YSNYNNYNNNYNNYNNYN 341
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 3.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 513 QAAITYGSLTDTHTISATPSDFSLSAF 433
Q AITY D T+ +PS SL+A+
Sbjct: 211 QTAITYVWKNDEGTLRKSPSLTSLNAY 237
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 3.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 513 QAAITYGSLTDTHTISATPSDFSLSAF 433
Q AITY D T+ +PS SL+A+
Sbjct: 211 QTAITYVWKNDEGTLRKSPSLTSLNAY 237
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 3.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 513 QAAITYGSLTDTHTISATPSDFSLSAF 433
Q AITY D T+ +PS SL+A+
Sbjct: 262 QTAITYVWKNDEGTLRKSPSLTSLNAY 288
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 3.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 513 QAAITYGSLTDTHTISATPSDFSLSAF 433
Q AITY D T+ +PS SL+A+
Sbjct: 211 QTAITYVWKNDEGTLRKSPSLTSLNAY 237
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.8
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = +2
Query: 68 VVKVMNFYHLLTYDRYNKINNK*GNYHSKNFYLLMFL 178
+ + N Y Y+ YN N NY +Y + ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.8
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = +2
Query: 68 VVKVMNFYHLLTYDRYNKINNK*GNYHSKNFYLLMFL 178
+ + N Y Y+ YN N NY +Y + ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.8
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = +2
Query: 68 VVKVMNFYHLLTYDRYNKINNK*GNYHSKNFYLLMFL 178
+ + N Y Y+ YN N NY +Y + ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 3.8
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = +2
Query: 68 VVKVMNFYHLLTYDRYNKINNK*GNYHSKNFYLLMFL 178
+ + N Y Y+ YN N NY +Y + ++
Sbjct: 82 ISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.0 bits (47), Expect = 3.8
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 65 KVVKVMNFYHLLTYDRYNKINNK*GNYHSKNFYLLMFL 178
K + N Y+ Y+ YN NN NY K +Y + ++
Sbjct: 88 KTIHNNNNYNNNNYNNYNYNNNNYNNY-KKLYYNINYI 124
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.8
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = -1
Query: 450 FSLSAFCTYPGKCVLEHPGVKAPGTANNTTFFP 352
+ S T+ G C+ PG+ + T+FP
Sbjct: 87 YQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFP 119
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,675
Number of Sequences: 438
Number of extensions: 5135
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -