Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K19
(906 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong s... 114 7e-26
At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong s... 114 9e-26
At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong s... 113 1e-25
At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar ... 106 2e-23
At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol sp... 93 2e-19
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 83 3e-16
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 37 0.021
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 33 0.20
At1g18740.1 68414.m02337 expressed protein 32 0.45
At3g02890.1 68416.m00284 PHD finger protein-related contains low... 29 3.2
At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearl... 29 5.6
At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /... 28 9.8
At3g57050.2 68416.m06351 cystathionine beta-lyase, chloroplast /... 28 9.8
At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /... 28 9.8
At1g79800.1 68414.m09316 plastocyanin-like domain-containing pro... 28 9.8
>At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 114 bits (275), Expect = 7e-26
Identities = 52/108 (48%), Positives = 72/108 (66%), Gaps = 3/108 (2%)
Frame = +2
Query: 260 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 430
MAPI VGD +P + E+ V++ + AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 431 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNF 574
A++LKS G+ EI+C SVNDP+VM AWG + V+ +AD SG +
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEY 108
>At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 114 bits (274), Expect = 9e-26
Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Frame = +2
Query: 260 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 430
MAPI VGD +P + E+ ++ L AGKKV+LF VPGAFTP CS H+PG++
Sbjct: 1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFI 60
Query: 431 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNF 574
+ A++LKS GV EI+C SVNDP+VM AWG + V+ +AD SG +
Sbjct: 61 EKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEY 108
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 618 GFRSKRFSMVIVDSKVQDLNVEPDGTGLSCSLADKI 725
G RS+RF++++ D KV NVE G + S AD I
Sbjct: 124 GVRSRRFALLLDDLKVTVANVESGGE-FTVSSADDI 158
>At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 113 bits (273), Expect = 1e-25
Identities = 52/108 (48%), Positives = 72/108 (66%), Gaps = 3/108 (2%)
Frame = +2
Query: 260 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 430
MAPI VGD +P + E+ V++ + AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 431 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNF 574
A++LKS G+ EI+C SVNDP+VM AWG + V+ +AD SG +
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEY 108
>At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar to
type 2 peroxiredoxin [Brassica rapa subsp. pekinensis]
GI:4928472; contains Pfam profile: PF00578 AhpC/TSA
(alkyl hydroperoxide reductase and thiol-specific
antioxidant) family
Length = 234
Score = 106 bits (255), Expect = 2e-23
Identities = 56/125 (44%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Frame = +2
Query: 215 TNRASARALHISQLSM-APIKVGDQLPAADLFEDSPAN----KVNICELTAGKKVVLFAV 379
TN ASA + + A I VGD+LP + L P+ V + LTAGKK +LFAV
Sbjct: 54 TNSASATTRSFATTPVTASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAV 113
Query: 380 PGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLAD 559
PGAFTP CS+ H+PG+V A +L+S G+ I C+SVND +VM AW +V +L+D
Sbjct: 114 PGAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSD 173
Query: 560 PSGNF 574
+G F
Sbjct: 174 GNGEF 178
>At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein
similar to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profiles PF00646:
F-box domain, PF00578: AhpC/TSA family
Length = 553
Score = 93.1 bits (221), Expect = 2e-19
Identities = 46/110 (41%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Frame = +2
Query: 260 MAPIKVGDQLPAADLF---EDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 430
MAPI VGD +P + +D V++ L AGKKV+LF VPGAF P CS H+ G++
Sbjct: 1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFI 60
Query: 431 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIK 580
+ A++LKS+GV EI+C+S +DP+++ A + V+ + D SG +I+
Sbjct: 61 EKAEELKSNGVDEIICLSGDDPFMITACSENKH----VKFVEDGSGEYIQ 106
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/93 (37%), Positives = 53/93 (56%)
Frame = +2
Query: 335 ICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAW 514
+ ++ GKKVV+F +PGA+T CS+ H+P Y + DK K+ G+ ++CVSVNDP+ + W
Sbjct: 67 LSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGW 126
Query: 515 GAQHNTKGKVRMLADPSGNFIKGSGPGHQSAAA 613
+ K + D G F K G +AA
Sbjct: 127 AEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAA 159
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 36.7 bits (81), Expect = 0.021
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Frame = +2
Query: 260 MAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNA 439
M I +GD +P ++ ++ +K + + A VLF+ PG FTP C+ T L + A
Sbjct: 1 MPGITLGDTVPNLEV--ETTHDKFKLHDYFANSWTVLFSHPGDFTPVCT-TELGAMAKYA 57
Query: 440 DKLKSDGVAEIVCVSVNDPYVMAAW-----GAQHNTKGKVRMLADPSGNFI 577
+ GV +++ +S +D W H +K ++ADP+ I
Sbjct: 58 HEFDKRGV-KLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEII 107
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 33.5 bits (73), Expect = 0.20
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +2
Query: 254 LSMAPIKVGDQLPAADLFEDSPANKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQ 433
L A + G P L +D V++ + GK VVL+ P TPGC+K +
Sbjct: 64 LIFAKVNKGQAAPDFTL-KDQNGKPVSLKKYK-GKPVVLYFYPADETPGCTK-QACAFRD 120
Query: 434 NADKLKSDGVAEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPSGNFIKGSG-PG 595
+ +K K G AE++ +S +D A+ +++ K +L+D K G PG
Sbjct: 121 SYEKFKKAG-AEVIGISGDDSASHKAFASKY--KLPYTLLSDEGNKVRKDWGVPG 172
>At1g18740.1 68414.m02337 expressed protein
Length = 382
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = -3
Query: 727 LILSAREQDRPVPSGSTFRSWTLLSTMTIENLLERKPPSGGRLVPRSRALDEVA----AG 560
+++SA + RP+ G R+ L + I L E+ PSG L R+R+ V
Sbjct: 138 IVISALDSHRPIGEGQLRRAKKALIDLAIGMLDEKDHPSGTNLAHRNRSFGRVKDSHHRS 197
Query: 559 IG*HTHLSFSV 527
IG LS+SV
Sbjct: 198 IGHFRSLSWSV 208
>At3g02890.1 68416.m00284 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 963
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = -1
Query: 576 MKLPLGSASIRTFPLVLC*APQAAITYGSLTDTHTISATPSDFSLSAFCTYPGKCVLEHP 397
+++ G+ ++ + P C A + GS +D S S L++ C++ G +L
Sbjct: 7 LEIQSGTCNVCSAPCSSCMHHNAEFS-GSKSDES--SDENSHGVLASQCSFNGDNLLRSS 63
Query: 396 GVKAPGTANNTT 361
GV APG+++NT+
Sbjct: 64 GVNAPGSSHNTS 75
>At1g55320.1 68414.m06319 acyl-activating enzyme 18 (AAE18) nearly
identical to acyl-activating enzyme 18 [Arabidopsis
thaliana] GI:29893268; similar to acetyl-CoA synthetase
[SP|P27095] from Methanothrix soehngenii; contains Pfam
AMP-binding enzyme domain PF00501l; identical to cDNA
acyl-activating enzyme 18 (At1g55320) GI: 29893267
Length = 725
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 305 FEDSPANKVNICELTAGKKVVLFAVPGAFTPG 400
F+DSP N++ I EL +V A+ G+F G
Sbjct: 199 FDDSPVNRMTIKELREQVMLVANAISGSFEKG 230
>At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 378
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -3
Query: 640 ENLLERKPPSGGRLVPR--SRALDEVAAGIG*HTHLSFSVVLSSPSRH--HIRVINRHAH 473
+ LL + P G +V R + LDEVAA IG T L + ++P + IR I+ AH
Sbjct: 185 DRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAH 244
>At3g57050.2 68416.m06351 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 449
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -3
Query: 640 ENLLERKPPSGGRLVPR--SRALDEVAAGIG*HTHLSFSVVLSSPSRH--HIRVINRHAH 473
+ LL + P G +V R + LDEVAA IG T L + ++P + IR I+ AH
Sbjct: 170 DRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAH 229
>At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 464
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -3
Query: 640 ENLLERKPPSGGRLVPR--SRALDEVAAGIG*HTHLSFSVVLSSPSRH--HIRVINRHAH 473
+ LL + P G +V R + LDEVAA IG T L + ++P + IR I+ AH
Sbjct: 185 DRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAH 244
>At1g79800.1 68414.m09316 plastocyanin-like domain-containing
protein
Length = 192
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +2
Query: 14 RFHYRESLRFELDIKVIKVVKVMNFYHLLTYDRYNKINNK*GNYHSKNFYLLMFLTGSS 190
RFH +SL F D + V FYH D +N + L F++GS+
Sbjct: 61 RFHIGDSLSFVYDKDSVMEVDKWGFYHCNGSDPITAFDNGNSTFDLDRPGLFYFISGSN 119
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,204,433
Number of Sequences: 28952
Number of extensions: 400417
Number of successful extensions: 1038
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2139598560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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