Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K18
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   1.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   1.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   3.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   7.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   7.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   7.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.6  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 116 NFNDTYDLTYSNYGSLSSPTLCNNRLCDHCI 208
           NFN  Y+  YSNY +      C      +C+
Sbjct: 212 NFNYQYNQAYSNYNNYQEGFSCQYYQGKNCV 242


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 116 NFNDTYDLTYSNYGSLSSPTLCNNRLCDHCI 208
           NFN  Y+  YSNY +      C      +C+
Sbjct: 232 NFNYQYNQAYSNYNNYQEGFSCQYYQGKNCV 262


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 354 NQDTTNNGPLKDTMNEQIKKL 416
           N+D T N   K+T NEQ  KL
Sbjct: 338 NEDETKNHYSKNTYNEQGNKL 358


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 354 NQDTTNNGPLKDTMNEQIKKL 416
           N+D T N   K+T NEQ  KL
Sbjct: 230 NEDETKNHYSKNTYNEQGNKL 250


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 492 KKICSTNKNSRIFQHNLNY 548
           KK+ + N  SR+F  N+N+
Sbjct: 58  KKLNNRNSKSRVFYENVNF 76


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 297 SVALKSFKKWLSTLKPILINQDTTNN 374
           S  L+  + W S+ +P+L   ++T N
Sbjct: 226 SFTLEQHRSWCSSSQPVLSTTNSTTN 251


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 113 SNFNDTYDLTYSNYGSLSSPTLCNNRLC 196
           SNFN++    + NY   +S   C   +C
Sbjct: 53  SNFNESSSSVFPNYIRTTSMVFCIIIMC 80


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 113 SNFNDTYDLTYSNYGSLSSPTLCNNRLC 196
           SNFN++    + NY   +S   C   +C
Sbjct: 53  SNFNESSSSVFPNYIRTTSMVFCIIIMC 80


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 19/83 (22%), Positives = 32/83 (38%)
 Frame = +2

Query: 266 ALAAQRRDNVLRRAEELQKVAQYFEANTNKSRHHEQWTTEGYYERANKEAELLRQQKIRA 445
           A  A + DN +  ++   K+AQ  +    +   +EQ   E      N   E  R + I  
Sbjct: 132 AAQAGQPDNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSRTRPITP 191

Query: 446 AKLEERRQKLELMLFQENMQYQQ 514
            ++E   Q +        MQ +Q
Sbjct: 192 KEIERMVQIIHKKFSSIQMQLKQ 214


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -3

Query: 349 SIGFKVLSHFLKLFSATEHIVSTLCSQC 266
           ++ F   +HFL L      + + LC+ C
Sbjct: 198 TVAFPKDNHFLALLDIVHGVHNELCNLC 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,950
Number of Sequences: 336
Number of extensions: 3577
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)