Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K17
(896 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 98 3e-19
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 91 5e-17
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 86 1e-15
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 69 1e-10
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 54 4e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 44 0.007
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.021
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 40 0.11
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 39 0.20
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 37 0.80
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.9
UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: Co... 34 5.7
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 34 5.7
UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome sh... 33 7.5
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.5
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 97.9 bits (233), Expect = 3e-19
Identities = 48/57 (84%), Positives = 49/57 (85%)
Frame = +1
Query: 484 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL 654
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL 58
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/62 (53%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 684 RIPVRLSPFGKRGAFX*LTPX--GISVRCRSFAPXWGCVHXPRYXPTGAPYPVTIVLSQP 857
R+P PF R A+ L GISVRCRSFAP W P + PT APYPVTIVLS
Sbjct: 63 RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPT 122
Query: 858 GK 863
K
Sbjct: 123 RK 124
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 90.6 bits (215), Expect = 5e-17
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +1
Query: 502 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL 654
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALL 94
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 86.2 bits (204), Expect = 1e-15
Identities = 41/49 (83%), Positives = 42/49 (85%)
Frame = +1
Query: 508 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL 654
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALL
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALL 126
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 315 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 413
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 69.3 bits (162), Expect = 1e-10
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -1
Query: 557 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 378
MLVRGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 291 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 449
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 54.4 bits (125), Expect = 4e-06
Identities = 31/62 (50%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 684 RIPVRLSPFGKRG--AFX*LTPXGISVRCRSFAPXWGCVHXPRYXPTGAPYPVTIVLSQP 857
RIPV PF G A + GIS RCRSFAP W P + PT APYPVT+ LS
Sbjct: 55 RIPV--PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAAPYPVTVHLSPT 112
Query: 858 GK 863
K
Sbjct: 113 RK 114
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +1
Query: 451 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 630
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 631 EAPSCALLSP 660
++PS +LL P
Sbjct: 104 QSPSYSLLFP 113
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 93 DPDMIRYIDEFGQTTTRMQ 149
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -1
Query: 857 GLTQDDSYRIXXXXXXXXXXVHTAPXWSERPTPN*DTXRRELXESATLPEGRKADR 690
G TQDDSYR +P WSERP P+ DT ++ P+G+KA++
Sbjct: 9 GWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQ 64
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.021
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +1
Query: 217 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 339
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 361 ERGSGRAPNTQTASPRALADSLMQ 290
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = -1
Query: 857 GLTQDDSYRIXXXXXXXXXXVHTAPXWSERPTPN 756
G TQDDSYRI +P WSERPTPN
Sbjct: 9 GWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 38.7 bits (86), Expect = 0.20
Identities = 19/28 (67%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +2
Query: 803 PLXPDRCALSGNYRLESTR*K-XFSPLA 883
P+ PDRCALSGNYRLES + SPLA
Sbjct: 5 PVQPDRCALSGNYRLESNPVRHDLSPLA 32
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 36.7 bits (81), Expect = 0.80
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -1
Query: 863 FTGLTQDDSYRIXXXXXXXXXXVHTAPXWSERPTPN*DT 747
F G TQ +SYRI + +P WSERPTP+ DT
Sbjct: 7 FPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.5 bits (78), Expect = 1.9
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -1
Query: 584 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVIPLILWITVLPPL 414
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 413 SELIPL 396
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_Q5LPI5 Cluster: CobN; n=10; Alphaproteobacteria|Rep: CobN
- Silicibacter pomeroyi
Length = 1097
Score = 33.9 bits (74), Expect = 5.7
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -3
Query: 654 EESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATR 511
EE+ + G++P +VLS F+ SDL +GGGA GK P R
Sbjct: 12 EETETPTDLGQSPADLVVLS-FSDSDLGAFAAGWHRGGGAVGKLPTLR 58
>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
serovar O2|Rep: MobA protein - Listonella anguillarum
serovar O2
Length = 548
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -1
Query: 206 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTFKS 39
NG+K N + + L++ CG L +L+ + + + LT+ +GR A P+ +S
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSVRS 544
>UniRef50_A5HC74 Cluster: Putative uncharacterized protein; n=1;
Adineta vaga|Rep: Putative uncharacterized protein -
Adineta vaga
Length = 400
Score = 33.9 bits (74), Expect = 5.7
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = -3
Query: 624 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPP 445
E GIF GF + L +D C + GG A +T + G+W + G L C+ + PP
Sbjct: 247 EGGGIF-KRKGFYYTMLGIDCCFCQWGGDA--RTFISNNPLGNWTYFGQLNYCADGKAPP 303
Query: 444 DSVD 433
D +D
Sbjct: 304 DHID 307
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 251 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 87
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q4RMS4 Cluster: Chromosome 3 SCAF15018, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 3
SCAF15018, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 754
Score = 33.5 bits (73), Expect = 7.5
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +1
Query: 418 GGNTVIHRIRGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETR 597
GG+ V ++GI+ ERT + +P + PR W S+ P + +++GG+ R
Sbjct: 611 GGHGVPGELQGIS-ERTLLELTRGKP-LLSHPRAWFVSLDGKPAAQVRHSIIELQGGQRR 668
Query: 598 QDYKDT 615
DT
Sbjct: 669 PSSNDT 674
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.5
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 424 NTVIHRIRGITQERTCE 474
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.1 bits (72), Expect = 9.9
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -1
Query: 557 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAA 387
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,929,025
Number of Sequences: 1657284
Number of extensions: 14012243
Number of successful extensions: 33038
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 31915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33025
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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