Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K17
         (896 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038660-1|AAC39733.1|  373|Homo sapiens beta-1,4-galactosyltran...    31   4.3  
AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens ...    31   5.7  

>AF038660-1|AAC39733.1|  373|Homo sapiens
           beta-1,4-galactosyltransferase protein.
          Length = 373

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 554 ASQKSTLKSEVAKPDRTIKIPGVSPWKLPRALSSLLXPTLXVXPDTCPP 700
           A+  S+  S  ++P+ T    G+   ++P AL     PTL   PDT PP
Sbjct: 57  AASSSSSSSNCSRPNATASSSGLP--EVPSALPGPTAPTLPPCPDTSPP 103


>AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35392 fis, clone SKNSH2000716. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = -3

Query: 552 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 436
           RQ  G  G   A R F  S P  GLL  CS LR  PDSV
Sbjct: 69  RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,562,598
Number of Sequences: 237096
Number of extensions: 2296898
Number of successful extensions: 9894
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9892
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)