Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K16
         (892 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   1.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.2  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    23   4.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.6  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   5.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -3

Query: 299  PSQRFLPRTRPSSLQAYLAFRGLELSSNSHILSLSTHS 186
            PS    PRTR        A + +E+SSNS  L LS  S
Sbjct: 1478 PSDTLNPRTRGEKPIVPSAEKFIEVSSNSITLHLSAWS 1515


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 739 SLVTVRFYLTPFLDSTITCTPLYAKNFVNFVN 644
           S ++  FY  P + +      ++ KNF N VN
Sbjct: 59  SEISENFYYLPAMSTGPLKYAIFQKNFTNIVN 90


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 306 LQIKCPFYVWSIIQQCPIVRWPR 374
           LQ+    +V S I   P+ RWP+
Sbjct: 1   LQVDMQLFVLSPIILIPLFRWPK 23


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 541 PGGKLHSRRGVNQPNNNSLKWHLKSHFRI*LTKMNS 648
           PG KL     ++ PN N LK +    + + + K +S
Sbjct: 134 PGIKLSINIILSDPNTNKLKLNTNESYELTVLKSDS 169


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -3

Query: 152 FCPYMRA*RPPLAVLKSCLKIVWRKMISILSFKIKN 45
           F  Y+R       ++  CL ++   M+ I+ FK K+
Sbjct: 63  FPNYIRTTSMVFCIIIMCLGVIGNVMVPIVIFKTKD 98


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -3

Query: 152 FCPYMRA*RPPLAVLKSCLKIVWRKMISILSFKIKN 45
           F  Y+R       ++  CL ++   M+ I+ FK K+
Sbjct: 63  FPNYIRTTSMVFCIIIMCLGVIGNVMVPIVIFKTKD 98


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 120 TGCFEELFKDSLEKNDINI 64
           +G +   +KD LEKN I++
Sbjct: 106 SGEYRSKYKDELEKNGIHV 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,293
Number of Sequences: 336
Number of extensions: 4401
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)