Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K16
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 126 2e-29
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 126 2e-29
03_06_0138 + 31940606-31940708,31940792-31940897,31941739-319418... 125 4e-29
04_01_0190 - 2234038-2234674,2237128-2237665,2239294-2239378 31 1.6
09_06_0344 - 22419152-22419250,22419460-22419554,22419952-224201... 30 2.8
05_03_0087 + 8286700-8288088 29 5.0
02_05_0689 - 30937621-30937665,30938143-30938208,30938303-309383... 28 8.7
>04_04_1015 - 30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 126 bits (304), Expect = 2e-29
Identities = 57/119 (47%), Positives = 86/119 (72%)
Frame = +2
Query: 206 IYDYLRTIRDPEKPNTLEDLKVVYEEGIFVKEPTADKVPVLRVEYNPTVPHCSLATLIGL 385
+ D R I+DPE P +LE+L VV E+ + + D++ +RV + PTV CS+AT+IGL
Sbjct: 681 VADSKRDIKDPEHPYSLEELNVVTEDSVEIN----DELSHVRVTFTPTVERCSMATVIGL 736
Query: 386 CIRIKILRSIHHPVKLDIFIKKGAHTTEDEINKQINDKERIAAAMENPNLRNLVENCIA 562
C+R+K++RS+ K+DI + G+H TE +NKQ+NDKER+AAA+ENPNL ++VE C++
Sbjct: 737 CLRVKLMRSLPPRYKVDIRVAPGSHATETAVNKQLNDKERVAAALENPNLLDIVEECLS 795
>04_04_1008 - 30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 126 bits (304), Expect = 2e-29
Identities = 57/119 (47%), Positives = 86/119 (72%)
Frame = +2
Query: 206 IYDYLRTIRDPEKPNTLEDLKVVYEEGIFVKEPTADKVPVLRVEYNPTVPHCSLATLIGL 385
+ D R I+DPE P +LE+L VV E+ + + D++ +RV + PTV CS+AT+IGL
Sbjct: 681 VADSKRDIKDPEHPYSLEELNVVTEDSVEIN----DELSHVRVTFTPTVERCSMATVIGL 736
Query: 386 CIRIKILRSIHHPVKLDIFIKKGAHTTEDEINKQINDKERIAAAMENPNLRNLVENCIA 562
C+R+K++RS+ K+DI + G+H TE +NKQ+NDKER+AAA+ENPNL ++VE C++
Sbjct: 737 CLRVKLMRSLPPRYKVDIRVAPGSHATETAVNKQLNDKERVAAALENPNLLDIVEECLS 795
>03_06_0138 +
31940606-31940708,31940792-31940897,31941739-31941838,
31942913-31942958,31943580-31943689
Length = 154
Score = 125 bits (302), Expect = 4e-29
Identities = 55/122 (45%), Positives = 86/122 (70%)
Frame = +2
Query: 206 IYDYLRTIRDPEKPNTLEDLKVVYEEGIFVKEPTADKVPVLRVEYNPTVPHCSLATLIGL 385
++D +R I+DPE P +LE L V+ EE + V E K+ +++ + PTV HCS+AT+IGL
Sbjct: 33 VFDTVRDIKDPEHPYSLEQLSVLSEESVSVDE----KLGRIQITFTPTVQHCSMATVIGL 88
Query: 386 CIRIKILRSIHHPVKLDIFIKKGAHTTEDEINKQINDKERIAAAMENPNLRNLVENCIAE 565
C+R+K++++ K+DI + G+ E+ +NKQ+NDKER+AAA+ENPNLR LV+ C+
Sbjct: 89 CLRLKLMQNFPPHFKIDIKVAPGSLANEESVNKQLNDKERVAAALENPNLRQLVDECLCS 148
Query: 566 EE 571
+
Sbjct: 149 ND 150
>04_01_0190 - 2234038-2234674,2237128-2237665,2239294-2239378
Length = 419
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = -1
Query: 355 GHCWIILHT*NGHFICSWFL---HKDSFLVHDL 266
GH W I+H F+C WF +K+ FLVH+L
Sbjct: 157 GHSWNIIH-----FMCGWFWNTENKELFLVHEL 184
>09_06_0344 -
22419152-22419250,22419460-22419554,22419952-22420108,
22420825-22420869,22421080-22421211,22421496-22421594,
22421690-22421785,22421968-22422149,22422242-22422494,
22422867-22422974,22423037-22423094,22423462-22423613,
22423698-22423792,22424172-22424287,22424369-22424495,
22424565-22424661,22424745-22424913,22425879-22426027
Length = 742
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 706 FLDSTITCTPLYAKNFVNFVNSFLSVIFENATSGAILENC 587
FL + T T Y K+F+ ++N +S FE+ A L C
Sbjct: 264 FLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFLLKC 303
>05_03_0087 + 8286700-8288088
Length = 462
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 517 NGESQSKKPGGKLHSRRGVNQPNN 588
NGES+ KK K ++ G N+PNN
Sbjct: 281 NGESKEKKDEHKEYNDNGTNKPNN 304
>02_05_0689 -
30937621-30937665,30938143-30938208,30938303-30938356,
30938489-30938560,30938648-30938743,30939883-30939960,
30940485-30940564,30940662-30941343
Length = 390
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 110 KQPVE-VAKPAYMDKSATLQELGYKD-ENELRETIYDYLRTIRDPEKPNTLEDLKVVYEE 283
+ P+E V K AT EL KD E E+R+ + D + ++ P+T E VY +
Sbjct: 314 RDPIERVRKLILAHDLATAAEL--KDMEKEIRKEVDDAIAKAKESPMPDTSELFTNVYVK 371
Query: 284 GIFVKEPTADK 316
G V+ AD+
Sbjct: 372 GFGVESFGADR 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,202,156
Number of Sequences: 37544
Number of extensions: 428974
Number of successful extensions: 1041
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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