Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K15
(918 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 6e-29
SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 6e-26
SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05) 91 2e-18
SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10) 75 1e-13
SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 2e-12
SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8) 64 2e-10
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 4e-07
SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_36121| Best HMM Match : CH (HMM E-Value=0.0017) 47 2e-05
SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 6e-05
SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 6e-05
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09) 38 0.011
SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12) 36 0.035
SB_15403| Best HMM Match : CH (HMM E-Value=0) 35 0.080
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 35 0.11
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 35 0.11
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_53060| Best HMM Match : ResIII (HMM E-Value=0.14) 29 5.3
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 125 bits (301), Expect = 6e-29
Identities = 68/142 (47%), Positives = 91/142 (64%), Gaps = 3/142 (2%)
Frame = +2
Query: 29 NSLRFESLEWIRMITGEPE-NTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMA 205
+ L ++ WI I GE D+ +EVLKDG +LC++AN + N+ KIN+S MA
Sbjct: 66 SDLAAQATAWIEGILGERVFGGKTGADDVHEVLKDGQVLCRVANKLGGNI--KINSSKMA 123
Query: 206 FKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKP--SI 379
FK MEN FLE +GVP + FQTVDL+E+QN+ V+ + +LGRKA + GK ++
Sbjct: 124 FKMMENTGKFLEFCDTIGVPKTDMFQTVDLYEKQNMPGVINGIHALGRKAHSTGKTCLAL 183
Query: 380 GPKEAEKNVRNFSEEQLRAGQG 445
GPKEA N R F+EEQ RAGQG
Sbjct: 184 GPKEASANPREFTEEQRRAGQG 205
>SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 115 bits (276), Expect = 6e-26
Identities = 60/141 (42%), Positives = 89/141 (63%), Gaps = 4/141 (2%)
Frame = +2
Query: 44 ESLEWIRMITGEPE-NTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCME 220
E+ +WI + GE +G +D ++ LKDG +LC+LAN + ++ KIN M FK ME
Sbjct: 435 EARKWIDTVLGESIFGENGGVDTVHQTLKDGQVLCRLANRLGGDL--KINQQKMPFKQME 492
Query: 221 NINAFLE-AARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGK--PSIGPKE 391
NI FL LGV + FQTVDL+E+ N+ +V+ C+ ++GR+A + GK P +GPKE
Sbjct: 493 NIGNFLSFIENNLGVAKNDLFQTVDLYEKSNMWNVICCIHAVGRRAYSLGKDVPQLGPKE 552
Query: 392 AEKNVRNFSEEQLRAGQGVIS 454
+ KN R F+E QL G+ +I+
Sbjct: 553 STKNPRQFTERQLNEGKTIIN 573
>SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05)
Length = 195
Score = 90.6 bits (215), Expect = 2e-18
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
Frame = +2
Query: 44 ESLEWIRMITGEPENTSGD-MDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCME 220
E+ WI + GE + D+ +VLKDG +L +LA + + K+N +M FK ME
Sbjct: 29 EARIWIEAVLGEKVFGGAEGPDDVQKVLKDGKILARLAIKLGAKI--KVNEQNMPFKQME 86
Query: 221 NINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKPSIGPKEAEK 400
NI FL LGV + + FQT DL++ N+ S + ++ L P++GPKEAE
Sbjct: 87 NIGNFLSHCGHLGVASGDQFQTADLYDNANMTSCQL-IKDL-------DIPTLGPKEAEA 138
Query: 401 NVRNFSEEQLRAGQGVI 451
NVR F+EEQLRAG+ ++
Sbjct: 139 NVREFTEEQLRAGESIL 155
>SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10)
Length = 172
Score = 74.5 bits (175), Expect = 1e-13
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +2
Query: 86 NTSGDM-DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGV 262
N GD D+F LK G +LCKLAN I P IKKIN + M F MENI F + GV
Sbjct: 81 NFGGDTADDFQNTLKSGVVLCKLANAIQPGAIKKINNAKMNFMMMENIENFCNFVQTKGV 140
Query: 263 PAQETFQTVDLWERQNLNSV 322
+Q F T+DL+E +N++ V
Sbjct: 141 ASQYQFVTIDLFEGKNMHQV 160
>SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 70.5 bits (165), Expect = 2e-12
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Frame = +2
Query: 26 GNSLRF-ESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSM 202
GN+ R+ E++ + GE + F E L+ G +LCK+AN I N I KI S+
Sbjct: 276 GNARRWVETMYGDTVAWGEERPNQRPGETFAEPLRSGVILCKIANKIKSNAIPKIGESNK 335
Query: 203 AFKCMENINAFLE-AARQLGVPAQETFQTVDLWERQNLNSV 322
+F ENI+ FL+ R LG+ FQTVDL+ERQN+ V
Sbjct: 336 SFVMQENISKFLDFCERVLGLDRLNLFQTVDLFERQNVGMV 376
>SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8)
Length = 89
Score = 64.1 bits (149), Expect = 2e-10
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = +2
Query: 215 MENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKPSIGPKEA 394
MENI FL LGV + FQTVDL+E+QN+ + +A P +GPKEA
Sbjct: 18 MENIGNFLLFCESLGVSKVDLFQTVDLYEKQNMAAA---------RAKGLNCPQLGPKEA 68
Query: 395 EKNVRNFSEEQLRAGQGV 448
E N R+F E++LRAG+G+
Sbjct: 69 EANPRSFDEDKLRAGKGI 86
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 40.3 bits (90), Expect(2) = 4e-07
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 188 NTSSMAFKCMENINAFLEAARQ--LGVPAQETFQTVDLWERQNLNSVVICLQSLGRK 352
N S + ENI FL A ++ Q+ FQTV L+ERQNL V+ +Q+ RK
Sbjct: 889 NRKSTSLGMQENIANFLNACQEEPFNCNPQDLFQTVYLFERQNLGQVISGIQAFARK 945
Score = 31.9 bits (69), Expect(2) = 4e-07
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 371 PSIGPKEAEKNVRNFSEE 424
P GPKEAEKN RNF E+
Sbjct: 986 PLFGPKEAEKNPRNFPEQ 1003
>SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 49.2 bits (112), Expect = 5e-06
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +2
Query: 152 ANNIHPNMIKK--INTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNL 313
AN I P +IKK +N M FK MENI F+ + GV + F TVDL+E++N+
Sbjct: 188 ANAIQPGVIKKPHLNPGKMGFKMMENIGWFVNFIKSYGVQEEYIFVTVDLYEKRNV 243
>SB_36121| Best HMM Match : CH (HMM E-Value=0.0017)
Length = 209
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = +2
Query: 44 ESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMEN 223
E+ WI T P D+F E L DG LLC+L N+ + +IN A +N
Sbjct: 32 EARRWIERATFTPFKN----DDFRESLADGVLLCELIVNVANISVGRINKQGTAHAGRDN 87
Query: 224 INAFLEAARQLGVPAQETFQTVDLWE 301
++ F A LG+ + F+ DL E
Sbjct: 88 LSVFFRACEALGLDKYQLFEHEDLDE 113
>SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 46.0 bits (104), Expect = 4e-05
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +2
Query: 371 PSIGPKEAEKNVRNFSEEQLRAGQGVI 451
P++GPKEAE NVR F+EEQLRAG+ ++
Sbjct: 10 PTLGPKEAEANVREFTEEQLRAGESIL 36
>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 45.6 bits (103), Expect = 6e-05
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +2
Query: 104 DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAF------KCMENINAFLEAARQLGVP 265
D+ L DG +LC L N+ + I I+ S KCM+N++ FLEA ++LGV
Sbjct: 330 DDLPASLADGVVLCHLVNSAYKGTIPSIHIPSAGVPKLTMTKCMKNVDYFLEACKKLGVD 389
Query: 266 AQETFQTVDLWERQNLNSVVICLQSL 343
+ + D+ + ++ V +Q+L
Sbjct: 390 RELLCSSADILQEKSPQRVCATVQAL 415
>SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 45.6 bits (103), Expect = 6e-05
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 107 NFYEVLKDGTLLCKLANNIHPNMIKKINTSSM--AFKCMENINAFLEAARQL-GVPAQET 277
+F + L+DG LLC++AN +HP + + F C++NI FL A +L + +
Sbjct: 50 DFAQSLRDGVLLCQVANVLHPGAVVDVGMKPQMSQFMCLKNIRNFLTACTRLFNLADGDL 109
Query: 278 FQTVDLWERQNLNSVVICLQSL 343
F +L++ + VV L L
Sbjct: 110 FDANELYDVSDFGKVVNTLSKL 131
>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
Length = 959
Score = 37.9 bits (84), Expect = 0.011
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Frame = +2
Query: 35 LRFESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNI----------HPNM--- 175
L+ + WI + GE E + D F +L G +LC+LAN I +P
Sbjct: 28 LKEDLASWISRLLGEEELNT---DTFTSMLDTGVVLCRLANFIQTVGEEFFVRNPKFPRR 84
Query: 176 ---------IKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVI 328
K+ + +F +N++ F+ R+L VP F+T DL +N +V++
Sbjct: 85 GLFPACGVTYKQRGATHGSFVARDNVSNFIRWCRELRVPDVIMFETEDLVLNKNEKTVLL 144
Query: 329 CLQSLGRKAGTYG 367
L + RKA G
Sbjct: 145 TLLEVARKAFKVG 157
>SB_36751| Best HMM Match : Exo_endo_phos (HMM E-Value=2e-12)
Length = 906
Score = 36.3 bits (80), Expect = 0.035
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 19/154 (12%)
Frame = +2
Query: 29 NSLRFESLEWIRMITGEPENTSGDMDNFYEVLKDGTLLCKLANNIH-------------- 166
N L+ + EW+ + DNF + L +G LLCKLA I
Sbjct: 35 NPLKEDLAEWLSRVL----EVEVQADNFMDYLDNGVLLCKLAQLIQKAATEWIKLDKAMS 90
Query: 167 ---PNMIKKI--NTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVIC 331
P++ + N S F +N FL+ + +G+ F++ L ++ V++C
Sbjct: 91 VTLPSLGSRFHQNAKSGTFFARDNAAYFLKWCKGVGIQDSVMFESDGLVLQKQPREVLLC 150
Query: 332 LQSLGRKAGTYGKPSIGPKEAEKNVRNFSEEQLR 433
L + R A +G + EK + E++++
Sbjct: 151 LLDVARFAANFGIDPPNLVKLEKEIDEEIEQEVK 184
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 35.1 bits (77), Expect = 0.080
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 80 PENTSGDMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM-AFKCMENINAFLEAAR 250
P + S D + YE +KDG LLCK+ N P I + IN + F EN + +A
Sbjct: 69 PIDASEDSSDLYEKVKDGILLCKMINLSAPGTIDERVINKPPLKVFTIHENQTLVINSAL 128
Query: 251 QLG 259
+G
Sbjct: 129 AIG 131
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 34.7 bits (76), Expect = 0.11
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Frame = +2
Query: 104 DNFYEVLKDGTLLCKLANNI----------HPNMI--KKI--------NTSSMAFKCMEN 223
D F+ L+DGTLLCKLAN I H + KKI + S F EN
Sbjct: 691 DFFFYALEDGTLLCKLANYIQEMADTYGQKHNTHVPGKKIKFKESKRGHRESKLFHSREN 750
Query: 224 INAFLEAARQLGVPAQETFQTVDLWE----RQNLNSVVICLQSLGRKAGTY 364
+ FL R +P F++ D+ R +VICL + R+ Y
Sbjct: 751 VQKFLTWCRWHDIPEAILFESNDVVLVDECRTGGREIVICLMEIARRVIKY 801
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 34.7 bits (76), Expect = 0.11
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 215 MENINAFLEAARQLGVPAQETFQTVDLWERQNLNSV 322
M I FL+ GV + FQTVDL+E+QN+ V
Sbjct: 700 MVTIAKFLDFCGTFGVAKSDLFQTVDLYEKQNIQQV 735
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +2
Query: 287 VDLWERQNLNSVVICLQSLG 346
V +W +N +SVV+C+QSLG
Sbjct: 258 VSVWASENTSSVVVCVQSLG 277
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 58 DSDDHRRTREHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQHIVDG 204
D+ +H REH + + + S RRH+ + H + K+ ++ G
Sbjct: 569 DNKEHHTRREHFKHNLRFIHSKNRRHAGYYLAMNHLGDRSDKELRVLRG 617
>SB_53060| Best HMM Match : ResIII (HMM E-Value=0.14)
Length = 1248
Score = 29.1 bits (62), Expect = 5.3
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +1
Query: 46 VLGMDSDDHRRTREHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQHIVDGLQVYGEY 225
V G+DS+ R R RG + R++S + ++ P H Q D +GL V+ Y
Sbjct: 359 VHGLDSEAERELRSLWRGSASRYQCR-RKNSRGEGARGAHPLHKQGDPQKHEGLAVWACY 417
Query: 226 QRFPRSRKTVG 258
R +G
Sbjct: 418 SHARRQTVPIG 428
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,043,004
Number of Sequences: 59808
Number of extensions: 473946
Number of successful extensions: 1239
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2657535823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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