Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K15
(918 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g10310.1 68416.m01237 kinesin motor protein-related similar t... 46 3e-05
At2g47500.1 68415.m05929 kinesin motor protein-related 44 1e-04
At5g27000.1 68418.m03221 kinesin motor protein-related non-conse... 43 3e-04
At1g09170.1 68414.m01024 kinesin motor protein-related similar t... 40 0.003
At5g48460.1 68418.m05992 fimbrin-like protein, putative strong s... 37 0.016
At5g55400.1 68418.m06902 fimbrin-like protein, putative similar ... 36 0.028
At5g35700.1 68418.m04269 fimbrin-like protein, putative similar ... 35 0.087
At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical t... 34 0.15
At2g04750.1 68415.m00485 fimbrin-like protein, putative similar ... 33 0.26
At5g17440.1 68418.m02046 LUC7 N_terminus domain-containing prote... 33 0.35
At3g44730.1 68416.m04814 kinesin motor protein-related similar t... 31 0.81
At1g63640.2 68414.m07198 kinesin motor protein-related C-termina... 31 1.1
At1g63640.1 68414.m07197 kinesin motor protein-related C-termina... 31 1.1
At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) simi... 31 1.4
At5g41310.1 68418.m05020 kinesin motor protein-related 30 1.9
At3g02140.1 68416.m00182 expressed protein 28 7.5
At3g07170.1 68416.m00854 sterile alpha motif (SAM) domain-contai... 28 10.0
>At3g10310.1 68416.m01237 kinesin motor protein-related similar to
carboxy-terminal kinesin 2 GB:P79955 [Xenopus laevis]
Length = 897
Score = 46.4 bits (105), Expect = 3e-05
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Frame = +2
Query: 38 RFESLEWIRMITGEPENTSGDMDN-FYEVLKDGTLLCKLANNIHPNMIKKI--NTSSM-- 202
RF++++W++ + G+ + + F L++G +LC N IHP + K+ N S +
Sbjct: 22 RFQAVQWLKSVVGQLGIPNQPSEKEFISCLRNGMILCNAINKIHPGAVSKVVENYSYLNG 81
Query: 203 ------AFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNS-----VVICLQSLGR 349
A++ EN+ FL A L +P F+ DL E+ NL S VV C+ LG
Sbjct: 82 EYQLPPAYQYFENVRNFLVALETLRLPG---FEASDL-EKDNLESGSVTKVVDCI--LGL 135
Query: 350 KA 355
KA
Sbjct: 136 KA 137
>At2g47500.1 68415.m05929 kinesin motor protein-related
Length = 974
Score = 44.4 bits (100), Expect = 1e-04
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Frame = +2
Query: 32 SLRFESLEWIRM---ITGEPENTSGDMDNFYEV-LKDGTLLCKLANNIHPNMIKKINTSS 199
S R+E+ W+R + G + + + + L+ G +LCK+ N + P + K+ S
Sbjct: 45 SRRYEAANWLRRMVGVVGAKDLPAEPTEEGLRLGLRSGIILCKVLNKVQPGAVSKVVESP 104
Query: 200 M------------AFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 343
AF+ EN+ FL A +++G P TF+ DL + N + VV C+ ++
Sbjct: 105 CDAILVADGAPLSAFQYFENVRNFLVAIQEMGFP---TFEASDLEQGGNASRVVNCVLAI 161
>At5g27000.1 68418.m03221 kinesin motor protein-related
non-consensus AT donor splice site at exon 12;
non-consensus AC acceptor splice site at exon 13
Length = 987
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Frame = +2
Query: 38 RFESLEWIRMITG--EPENTSGDM--DNFYEVLKDGTLLCKLANNIHPNMIKKI------ 187
R+E+ W+R + G ++ G+ + F L+ G +LC + N ++P + K+
Sbjct: 47 RYEAAGWLRDMIGVSNGKDFPGEPSEEEFRLGLRSGIVLCNVLNKVNPGSVSKVVEAPDD 106
Query: 188 ---NTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAG 358
+ AF+ ENI FL A ++G+P +F+ D+ + +V C+ +L +
Sbjct: 107 VADGAALSAFQYFENIRNFLVAIEEMGLP---SFEASDMEKGGKSIRIVNCILALKSYSE 163
Query: 359 TYGKPSIGPKEAEKNVR-NFSEEQL 430
K GP N++ NF +L
Sbjct: 164 WKLKGENGPWRYGSNMKHNFGSRKL 188
>At1g09170.1 68414.m01024 kinesin motor protein-related similar to
GB:AAB61066
Length = 1010
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 16/118 (13%)
Frame = +2
Query: 38 RFESLEWIR----MITGEPENTSGDMDNFYEVLKDGTLLCKLANNIHPNMIKKI------ 187
R+E+ W+R ++ G ++F L+ G LLC + N + P + K+
Sbjct: 57 RYEAARWVRNTLGVVGGRDLPADPSEEDFRIALRSGILLCNVLNRVKPGAVPKVVEAPND 116
Query: 188 ------NTSSMAFKCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 343
+ AF+ EN+ FL ++G+P TF+ D + +V C+ +L
Sbjct: 117 PLVNQDGAALSAFQYFENLRNFLVFVEEMGIP---TFEVSDFEKGGKSARIVECVLAL 171
>At5g48460.1 68418.m05992 fimbrin-like protein, putative strong
similarity to fimbrin-like protein AtFim2 [Arabidopsis
thaliana] GI:2737926; contains Pfam profile PF00307:
Calponin homology (CH) domain
Length = 654
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 104 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 259
++ +EV KDG LLCKL N P I + INT SM ++ EN L +A+ +G
Sbjct: 155 NDLFEVAKDGVLLCKLINVAVPGTIDERAINTKSMLNPWERNENHTLCLNSAKAIG 210
>At5g55400.1 68418.m06902 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 714
Score = 36.3 bits (80), Expect = 0.028
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +2
Query: 98 DMDNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 259
D ++ YE++KDG LLCKL N P I + INT + ++ EN L +A+ +G
Sbjct: 153 DSNDLYELVKDGVLLCKLINIAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVG 210
>At5g35700.1 68418.m04269 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893, fimbrin [Schizosaccharomyces pombe]
GI:3057144; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 687
Score = 34.7 bits (76), Expect = 0.087
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +2
Query: 110 FYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 259
F++++KDG LLCKL N P I + INT ++ EN+ L +A+ +G
Sbjct: 155 FFDLVKDGVLLCKLINVAVPGTIDERAINTKKTLNPWERNENLTLGLNSAKAIG 208
>At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893
Length = 687
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 104 DNFYEVLKDGTLLCKLANNIHPNMI--KKINTSSM--AFKCMENINAFLEAARQLG 259
+ YE++KDG LLCKL N P I + INT + ++ EN L +A+ +G
Sbjct: 154 NQLYELVKDGVLLCKLINVAVPGTIDERAINTKRVLNPWERNENHTLCLNSAKAVG 209
>At2g04750.1 68415.m00485 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 652
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +2
Query: 113 YEVLKDGTLLCKLANNIHPNMI--KKINTSS--MAFKCMENINAFLEAARQLG 259
++++KDG LLCKL N P I + INT ++ EN++ L +A+ +G
Sbjct: 150 FDLVKDGVLLCKLINIAVPGTIDERAINTKKELNPWERTENLSLCLNSAKAIG 202
>At5g17440.1 68418.m02046 LUC7 N_terminus domain-containing protein
contains Pfam domain PF03194: Protein of unknown
function, DUF259
Length = 404
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 58 DSDDHRRTREHLRGYGQLLRSA*R-RHSSVQASQQHPPEHDQKDQH 192
D D H REH R Y Q R R SS S++ P +HD++ +H
Sbjct: 356 DRDRHHDHREHDRNYNQSRGYDSRSRRSSRSRSRERPRDHDRRRRH 401
>At3g44730.1 68416.m04814 kinesin motor protein-related similar to 4
other kinesin-like proteins of A. thaliana: F02P16.12
(PID:g2191180), katA (D11371), katB (D21137), and katC
(D21138); contains non-consensus AT-AC splice sites at
intron 10
Length = 1087
Score = 31.5 bits (68), Expect = 0.81
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 13/93 (13%)
Frame = +2
Query: 104 DNFYEVLKDGTLLCKLANNIHPNMIKKI-------------NTSSMAFKCMENINAFLEA 244
D F L++G +LC + N ++P + K+ + A + EN+ FL+A
Sbjct: 16 DEFSLALRNGLILCNVLNKVNPGSVLKVVENPITPAIQYADGAAQSAIQYFENMRNFLKA 75
Query: 245 ARQLGVPAQETFQTVDLWERQNLNSVVICLQSL 343
+ + TF DL + + N VV C+ L
Sbjct: 76 VEDMQL---LTFGASDLEKGGSSNKVVDCILCL 105
>At1g63640.2 68414.m07198 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1065
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 104 DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQ 283
D L+DGT+LC L N + P ++ + A I FL A ++ +P F+
Sbjct: 65 DELRACLRDGTVLCSLLNQLSPGSMRMGGSFEPA---SVKIERFLTAMDEMALP---RFE 118
Query: 284 TVDLWERQNLNSVVICLQSL--GRKAGTYGKPSIGPK 388
D+ E+ ++ V+ L++L G+Y K S+ +
Sbjct: 119 VSDI-EQGDMVPVLQSLKALKASFSDGSYDKNSLAAR 154
>At1g63640.1 68414.m07197 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1064
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 104 DNFYEVLKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQ 283
D L+DGT+LC L N + P ++ + A I FL A ++ +P F+
Sbjct: 65 DELRACLRDGTVLCSLLNQLSPGSMRMGGSFEPA---SVKIERFLTAMDEMALP---RFE 118
Query: 284 TVDLWERQNLNSVVICLQSL--GRKAGTYGKPSIGPK 388
D+ E+ ++ V+ L++L G+Y K S+ +
Sbjct: 119 VSDI-EQGDMVPVLQSLKALKASFSDGSYDKNSLAAR 154
>At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) similar
to CREB-binding protein GB:AAC51770 GI:2443859 from [Homo
sapiens]; contains Pfam PF02135: TAZ zinc finger profile;
contains Pfam PF00569: Zinc finger, ZZ type domain;
identical to histone acetyltransferase HAC4 (GI:14794966)
{Arabidopsis thaliana}
Length = 1456
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +2
Query: 209 KCMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKPSIGPK 388
K +E FLE R+ P++ +++ ++ Q + +V +CL G +G S GP
Sbjct: 913 KVLEVKERFLELFREENYPSEFPYKSKAIFLFQKIENVEVCL--FGMFVQEFGTDS-GPP 969
Query: 389 EAEKNVRNFSEEQLR 433
+ R S E LR
Sbjct: 970 NERRTFRTVSGEALR 984
>At5g41310.1 68418.m05020 kinesin motor protein-related
Length = 961
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 122 LKDGTLLCKLANNIHPNMIKKINTSSMAFKCMENINAFLEAARQLGVPAQETFQTV 289
L DGT+LC L N + P ++ S C+ NI FL A ++ +P E+ + +
Sbjct: 72 LVDGTVLCNLLNQLSPGSMRM--GGSFEPGCV-NIERFLAAMDEMTLPRFESLKAL 124
>At3g02140.1 68416.m00182 expressed protein
Length = 319
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 169 EHDQKDQHIVDGLQVYGEYQRFPRSRK 249
E D+KD + GL + G++ PRSRK
Sbjct: 57 EEDEKDVELTLGLSLNGQFGTDPRSRK 83
>At3g07170.1 68416.m00854 sterile alpha motif (SAM)
domain-containing protein contains Pfam profile PF00536:
SAM domain (Sterile alpha motif)
Length = 203
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 389 EAEKNVRNFSEEQLRAGQGVISLQXRFK*GRQPKRNQLW*HE 514
EAE R ++++ G G IS + R G++ +++ W H+
Sbjct: 7 EAESGSRKVVKDRINGGSGDISTRVRQVTGKRQRQDDKWEHD 48
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,382,567
Number of Sequences: 28952
Number of extensions: 330904
Number of successful extensions: 946
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2178500352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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