Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K11
         (922 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    27   0.21 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.63 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   5.9  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 95  VPYCLIKCIIYVI 133
           VPYC I C+IY+I
Sbjct: 216 VPYCYINCLIYLI 228


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 169 GKKQQLFSVWYIYNINNALN*TVRYLCTCVCTQDQQN 59
           G    +F++ Y+Y  +N  N  +R + TC C +D +N
Sbjct: 149 GLTSPIFNLVYVYCCDNNFNVFLRQVFTCRC-KDYKN 184


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 781 STAIKKTL*GKEGHC*GGKYHAEYVVVAKKERNL 882
           S AI + L G+  H  G +  A+Y  +A++ER L
Sbjct: 506 SAAINQIL-GRRWHALGREEQAKYYELARRERQL 538


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 781 STAIKKTL*GKEGHC*GGKYHAEYVVVAKKERNL 882
           S AI + L G+  H  G +  A+Y  +A++ER L
Sbjct: 398 SAAINQIL-GRRWHALGREEQAKYYELARRERQL 430


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 203 LNLCFNNCQVC*AVLYLFKCTFMGTYYFSLNCTHYIY 313
           ++L F  C     V  LF C F+      L CT+Y Y
Sbjct: 68  VHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFY 104


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 349 QGCRHFTKDRKIYSICSKTLKNSTVFRNLIKSQQPK 456
           +G +  +K ++IY I +    N    R   KS++PK
Sbjct: 22  RGRKKLSKHQQIYGIWADDSDNDEEERPSFKSRKPK 57


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 726 SMILMFFFQLFYKCQC 679
           ++++++ F LFY C C
Sbjct: 312 TLVVIYTFNLFYLCFC 327


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 726 SMILMFFFQLFYKCQC 679
           ++++++ F LFY C C
Sbjct: 268 TLVVIYTFNLFYLCFC 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,504
Number of Sequences: 336
Number of extensions: 4056
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)