Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K11
         (922 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0050 - 444267-444914                                             33   0.32 
07_01_1106 - 10187609-10190041,10190292-10191932                       29   3.9  
02_01_0033 + 202703-202705,203397-203458,203566-203665,203875-20...    29   3.9  
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763...    29   6.9  
04_03_0785 + 19619062-19619532,19620047-19621012                       29   6.9  

>06_01_0050 - 444267-444914
          Length = 215

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
 Frame = +1

Query: 598 KILRNGNIIHSRDVTTEQMSDATNT-------ATALAFIKELEEKHEDHRTEQEKLDDD 753
           K+L+ G   H++D    Q              A + A I ELE+K +  R EQ++LDD+
Sbjct: 11  KVLKKGKKKHAKDELDRQKQAEKKRRRLEKALANSAAIISELEKKRQQKREEQQRLDDE 69


>07_01_1106 - 10187609-10190041,10190292-10191932
          Length = 1357

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +3

Query: 552 NIRECLETKAVPDHVKNPEKWKYYSLSGCY 641
           N+ +C+    +P + ++ +K +Y + +GCY
Sbjct: 460 NLSDCIRLMGIPQNFEDLQKLEYLNFAGCY 489


>02_01_0033 +
           202703-202705,203397-203458,203566-203665,203875-203916,
           204264-204305,204437-204589,206559-207221
          Length = 354

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 673 ATALAFIKELEEKHEDHRTEQEKLDDD 753
           A + A I ELE+K +  R EQ++LD++
Sbjct: 174 ANSAAIISELEKKKQKKREEQQRLDEE 200


>06_01_0983 -
           7630651-7630683,7630717-7630942,7630993-7631234,
           7631502-7631591,7631680-7631845,7632225-7633191,
           7633402-7633591,7633908-7634048,7634416-7634736
          Length = 791

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 441 VTTTQDYGTIDRKSYRKLKHEMKQFRGKQSIFKRPEANI 557
           + T +DYG+   + Y K++ E  +    +S  K P A +
Sbjct: 432 IITNEDYGSFTTEDYEKVRREADEAIASKSATKSPVAEV 470


>04_03_0785 + 19619062-19619532,19620047-19621012
          Length = 478

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 570 ETKAVPDHVKNPEKWKYYSL 629
           E+  VPD+VKNP K+  Y+L
Sbjct: 345 ESPGVPDYVKNPAKYTRYTL 364


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,458,743
Number of Sequences: 37544
Number of extensions: 318211
Number of successful extensions: 725
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)