Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K11
         (922 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004865-1|AAO45221.1|  233|Drosophila melanogaster LD44422p pro...    57   4e-08
AE014296-1784|AAF50179.1|  233|Drosophila melanogaster CG6674-PA...    57   4e-08
AE014297-112|ABI31134.1|  823|Drosophila melanogaster CG41467-PA...    32   1.3  

>BT004865-1|AAO45221.1|  233|Drosophila melanogaster LD44422p
           protein.
          Length = 233

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 23/43 (53%), Positives = 31/43 (72%)
 Frame = +3

Query: 504 MKQFRGKQSIFKRPEANIRECLETKAVPDHVKNPEKWKYYSLS 632
           +++ RGK+SIFK+PE  I  CL+ +  PD+  NP KWK YSLS
Sbjct: 73  LRRMRGKESIFKKPELPIGRCLKPRKTPDYQVNPHKWKKYSLS 115


>AE014296-1784|AAF50179.1|  233|Drosophila melanogaster CG6674-PA
           protein.
          Length = 233

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 23/43 (53%), Positives = 31/43 (72%)
 Frame = +3

Query: 504 MKQFRGKQSIFKRPEANIRECLETKAVPDHVKNPEKWKYYSLS 632
           +++ RGK+SIFK+PE  I  CL+ +  PD+  NP KWK YSLS
Sbjct: 73  LRRMRGKESIFKKPELPIGRCLKPRKTPDYQVNPHKWKKYSLS 115


>AE014297-112|ABI31134.1|  823|Drosophila melanogaster CG41467-PA,
           isoform A protein.
          Length = 823

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +3

Query: 357 SSFHERQKNLFNLLKDAEEQYSFSKSNKVTTTQDYGTIDRKSY-RKLKHEMKQFRGKQSI 533
           +  HER K L N+L + +++Y    SN V    D    +RK +   +K ++ + + K   
Sbjct: 32  AELHERSKRLKNMLDEEDKRYEEEFSNTVKNRIDQDIKERKEHLHAIKEQVAKQQKKFLE 91

Query: 534 FKRPEANIRECLETKAVPDH 593
            K  +  + +C E +    H
Sbjct: 92  EKHIQQVMLDCYEIREALRH 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,696,229
Number of Sequences: 53049
Number of extensions: 609265
Number of successful extensions: 1721
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1720
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4525903863
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)