Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K11
         (922 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    34   0.002
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    26   0.42 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    24   2.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   3.9  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    23   5.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   6.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   6.8  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 34.3 bits (75), Expect = 0.002
 Identities = 30/127 (23%), Positives = 58/127 (45%)
 Frame = +3

Query: 321 NREY*DQKLTRMSSFHERQKNLFNLLKDAEEQYSFSKSNKVTTTQDYGTIDRKSYRKLKH 500
           NREY  +K  R    H  ++ L    + + ++YS S+  +  + ++  +   + YR+   
Sbjct: 242 NREY-KEKDRRYEKLHNEKEKLLEE-RTSRKRYSCSREREQKSYKNENSY--RKYRETSK 297

Query: 501 EMKQFRGKQSIFKRPEANIRECLETKAVPDHVKNPEKWKYYSLSGCYN*ANVRRNQHSNC 680
           E  + R ++   + P+  I   L  K +  H  N  K+ Y + +  YN  N   N ++NC
Sbjct: 298 ERSRDRTERERSREPK--IISSLSNKTI--HNNNNYKYNYNNNN--YNNNNYNNNYNNNC 351

Query: 681 IGIYKRV 701
             +Y  +
Sbjct: 352 KKLYYNI 358


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 26.2 bits (55), Expect = 0.42
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +2

Query: 680 HWHL*KSWKKNMRIIEQNKKNLMMIYLKSQ 769
           HWHL   ++ ++RI+ ++++  +  Y+  Q
Sbjct: 211 HWHLVYPFEGDIRIVNKDRRGELFYYMHQQ 240


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 679 ALAFIKELEEKHEDHRTEQEKL 744
           A  FIK LEE+   H   +E+L
Sbjct: 93  AKRFIKSLEERERKHAVHKEQL 114


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 677 LHWHL*KSWKKNMRIIEQNKKNLMMIYLK 763
           L ++L K WKKN+ + +   K L  I+LK
Sbjct: 86  LEFYLGKEWKKNLNLRDSVTKYL--IHLK 112


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -2

Query: 690 KCQCSCCVGCV*HLLSCN 637
           +C C+ C+GC      C+
Sbjct: 84  QCSCNKCIGCSAEKFECS 101


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +3

Query: 570 ETKAVPDHVKNPEKWKYYSLSGCYN 644
           ET      ++    W YY+   CYN
Sbjct: 199 ETLKAAKRMRPAANWGYYAYPYCYN 223


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 704 KKNMRIIEQNKKNLMMI 754
           ++NM ++ QN+K L MI
Sbjct: 339 RQNMDMVAQNEKTLQMI 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,308
Number of Sequences: 438
Number of extensions: 4459
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)