Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K10
         (889 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.4  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   7.4  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    22   7.4  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   7.4  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   7.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 354  SPPPVMRLIDCQSTSRHHITPPWPLK 277
            +PP V   +D  ++S  H+ P W  K
Sbjct: 1013 APPQVTTGVDTGASSTEHMHPDWTTK 1038



 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 290  GGVIWCLDVD 319
            GG+IW LD+D
Sbjct: 1734 GGMIWALDLD 1743



 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 290  GGVIWCLDVD 319
            GG+IW LD+D
Sbjct: 2159 GGMIWALDLD 2168



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 290  GGVIWCLDVD 319
            GG++W LD+D
Sbjct: 2657 GGMVWALDLD 2666


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 453 IKLLIPLTKLWDTL-VEVFVIDTRTIDETVSGQAPILKWEI 572
           + LL+ LT L   + ++V VI T+   ETV+     + W I
Sbjct: 216 VLLLVALTTLQLLIYIQVIVIGTKNTIETVAYSVIFILWHI 256


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 753 ITASKDHTAKLFDTNSLXLLKEYRQR 830
           I  S D+T  L D  ++ LL+ Y Q+
Sbjct: 770 IDESVDYTKPLVDAQTMNLLRSYHQQ 795



 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 671 LVKKSTLLKSIPTKSPI 721
           L +++ LL+ +PT SP+
Sbjct: 105 LSERAALLRGVPTLSPV 121


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 722 ISVIWWVCSLTEWIFLPVLRS 660
           ISV WW   ++E  +LP +R+
Sbjct: 20  ISVGWWENFVSETSYLPFIRA 40


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 722 ISVIWWVCSLTEWIFLPVLRS 660
           ISV WW   ++E  +LP +R+
Sbjct: 253 ISVGWWENFVSETSYLPFIRA 273


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 722 ISVIWWVCSLTEWIFLPVLRS 660
           ISV WW   ++E  +LP +R+
Sbjct: 253 ISVGWWENFVSETSYLPFIRA 273


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 414 LDLSVAIFLPVSRSHNLQELSPPP 343
           LD  V+I +P+S  H   E  P P
Sbjct: 383 LDKGVSIMVPISGLHYDPEYYPDP 406


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 707 WVCSLTEWIFLPVLRSHCIRSPA 639
           WVC +   +F  +  S   RSPA
Sbjct: 15  WVCMVLAVVFQEITSSPAGRSPA 37


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 707 WVCSLTEWIFLPVLRSHCIRSPA 639
           WVC +   +F  +  S   RSPA
Sbjct: 15  WVCMVLAVVFQEITSSPAGRSPA 37


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 707 WVCSLTEWIFLPVLRSHCIRSPA 639
           WVC +   +F  +  S   RSPA
Sbjct: 15  WVCMVLAVVFQEITSSPAGRSPA 37


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 525 IDETVSGQAPILKWEITDSK 584
           ID   + +  +L W ITDS+
Sbjct: 238 IDGMAASKLNVLHWHITDSQ 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,181
Number of Sequences: 336
Number of extensions: 5146
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)