Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K10
(889 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 135 3e-32
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 134 6e-32
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 134 6e-32
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 134 6e-32
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 72 6e-13
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 71 1e-12
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 67 1e-11
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 67 1e-11
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 59 4e-09
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 56 2e-08
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 54 2e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 53 2e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 53 2e-07
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 53 3e-07
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 53 3e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 52 4e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 52 7e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 52 7e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 52 7e-07
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 51 9e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 51 9e-07
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 50 3e-06
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 49 5e-06
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 48 6e-06
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 48 8e-06
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 47 2e-05
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 47 2e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 47 2e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 47 2e-05
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 45 6e-05
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 45 8e-05
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 44 1e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 44 1e-04
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 44 2e-04
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 44 2e-04
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 44 2e-04
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 44 2e-04
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 42 4e-04
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 42 4e-04
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 42 4e-04
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 42 4e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 42 5e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 42 7e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 42 7e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 41 0.001
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 41 0.001
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 41 0.001
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 40 0.002
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 40 0.002
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 40 0.002
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 40 0.002
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 40 0.003
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 39 0.004
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 39 0.004
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 39 0.004
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 39 0.005
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 39 0.005
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 38 0.007
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 38 0.007
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 38 0.007
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 38 0.009
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 38 0.009
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 38 0.009
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 38 0.009
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 38 0.012
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 38 0.012
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 38 0.012
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 37 0.016
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 37 0.016
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 37 0.021
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 37 0.021
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.027
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 36 0.036
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 36 0.036
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 36 0.036
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 36 0.036
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 36 0.036
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 36 0.036
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 36 0.047
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.047
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 36 0.047
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 35 0.063
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 35 0.063
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 35 0.083
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 34 0.11
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 34 0.11
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 34 0.11
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 34 0.11
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 34 0.11
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 34 0.14
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 34 0.14
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 34 0.14
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 34 0.14
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 33 0.19
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 33 0.19
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 33 0.19
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.19
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 33 0.19
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 33 0.25
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 33 0.25
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 33 0.33
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 33 0.33
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 33 0.33
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 32 0.44
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 32 0.44
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 32 0.44
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 32 0.44
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 32 0.58
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 32 0.58
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 32 0.58
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 32 0.58
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 32 0.58
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 32 0.58
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 31 0.77
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 31 0.77
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 31 1.0
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 31 1.0
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 31 1.0
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 31 1.4
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 31 1.4
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 1.4
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 31 1.4
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 30 1.8
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 30 1.8
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 30 1.8
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 30 1.8
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 30 1.8
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 2.4
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 30 2.4
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 29 3.1
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 29 3.1
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 29 3.1
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 3.1
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 29 3.1
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 29 3.1
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 29 3.1
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 29 3.1
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 29 4.1
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 29 4.1
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 29 4.1
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 29 5.4
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 29 5.4
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 29 5.4
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 29 5.4
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 29 5.4
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 29 5.4
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 29 5.4
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 29 5.4
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 29 5.4
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 28 7.2
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 28 7.2
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 28 7.2
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 28 7.2
At5g26340.1 68418.m03148 hexose transporter, putative strong sim... 28 9.5
At5g23070.1 68418.m02697 thymidine kinase, putative similar to t... 28 9.5
At5g19280.1 68418.m02298 kinase associated protein phosphatase (... 28 9.5
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 28 9.5
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 28 9.5
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 28 9.5
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 135 bits (327), Expect = 3e-32
Identities = 55/117 (47%), Positives = 80/117 (68%)
Frame = +2
Query: 137 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 316
M+P++++GH+R +T ++YNR GDLLFS AKD P VW++ NGERLGT+ GH G +WC D+
Sbjct: 28 MRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDI 87
Query: 317 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMG 487
S LITG D + +LWD+++GK + T K + R+ +FS + A TTD +G
Sbjct: 88 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVG 144
Score = 32.7 bits (71), Expect = 0.33
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +3
Query: 528 DETVSGQAPILKWEITDSKVTSMIWGSLDETIITGH*SW*PYTMGSEDW*KNPLC*RAYP 707
++ V +L+ K+ +WG L++TI++G +E L
Sbjct: 159 EDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETG--KLLKQSDEE 216
Query: 708 PNHRYA-TXL---VDGTMFITASKDHTAKLFDTNSLXLLKEY 821
H+ A T L D + F+T S D TAKL+D +L L+K Y
Sbjct: 217 VGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTY 258
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +2
Query: 320 WQSIN--LITGGGDSSCRLWDLETGK 391
W +N +++GG D++ R+WD ETGK
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGK 208
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 209 LFSAAKDSKPNVWWSLNGERLGTFN---GHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 379
+ S +D+ +W + G+ L + GH I L + +TG D + +LWD+
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Query: 380 ET 385
T
Sbjct: 250 RT 251
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 134 bits (325), Expect = 6e-32
Identities = 55/113 (48%), Positives = 79/113 (69%)
Frame = +2
Query: 137 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 316
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 317 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTD 475
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTD 113
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 738 DGTMFITASKDHTAKLFDTNSLXLLKEY 821
D + F+T S D TAKL+D +L LLK Y
Sbjct: 204 DDSHFLTGSLDKTAKLWDMRTLTLLKTY 231
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +2
Query: 320 WQSIN--LITGGGDSSCRLWDLETGK 391
W +N +++GG D R+WD ETGK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 134 bits (325), Expect = 6e-32
Identities = 55/113 (48%), Positives = 79/113 (69%)
Frame = +2
Query: 137 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 316
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 317 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTD 475
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTD 113
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 738 DGTMFITASKDHTAKLFDTNSLXLLKEY 821
D + F+T S D TAKL+D +L LLK Y
Sbjct: 204 DDSHFLTGSLDKTAKLWDMRTLTLLKTY 231
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +2
Query: 320 WQSIN--LITGGGDSSCRLWDLETGK 391
W +N +++GG D R+WD ETGK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 134 bits (325), Expect = 6e-32
Identities = 55/113 (48%), Positives = 79/113 (69%)
Frame = +2
Query: 137 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV 316
M+P++++GH+R +T ++YNREGDLLFS AKD P +W++ NGERLGT+ GH G +WC DV
Sbjct: 1 MRPILMKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDV 60
Query: 317 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTD 475
S LITG D + +LWD+++GK + T K N+ R+ +F+ A TTD
Sbjct: 61 SRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTD 113
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 738 DGTMFITASKDHTAKLFDTNSLXLLKEY 821
D + F+T S D TAKL+D +L LLK Y
Sbjct: 204 DDSHFLTGSLDKTAKLWDMRTLTLLKTY 231
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +2
Query: 320 WQSIN--LITGGGDSSCRLWDLETGK 391
W +N +++GG D R+WD ETGK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGK 181
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 71.7 bits (168), Expect = 6e-13
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Frame = +2
Query: 143 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 313
PL+ GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W
Sbjct: 4 PLVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCS 63
Query: 314 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQ 457
+D +I + D + ++W+ TG + + + VR C FS ++
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHR 111
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Frame = +2
Query: 143 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 313
PL+ GH R + + Y+ +G L SA+KDS+P + G+ +GTF GH G +W
Sbjct: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 314 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFS 442
+D ++ + D S +LWD TG + + + VR C FS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 365 RLWDLETGKNIATLKSNSSVRTCNFS 442
RLWD+ +GK + TL++ S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +2
Query: 143 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 313
P + GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W
Sbjct: 9 PQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 314 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFS 442
+D ++ + D S +LWD TG + + + VR C FS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +2
Query: 194 REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 373
+ G+ + +D V+ GE +G GH G + C+ ++ +G D + R+W
Sbjct: 238 KSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 365 RLWDLETGKNIATLKSNSSVRTCNFS 442
RLWD+ +GK + TL++ S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Frame = +2
Query: 143 PLMLQGHQRAITQIKYNR---EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 313
P + GH R + + Y+ +G L SA+KDS P + G+ +GTF GH G +W
Sbjct: 9 PQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSC 68
Query: 314 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFS 442
+D ++ + D S +LWD TG + + + VR C FS
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS 111
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +2
Query: 194 REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 373
+ G+ + +D V+ GE +G GH G + C+ ++ +G D + R+W
Sbjct: 238 KSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 365 RLWDLETGKNIATLKSNSSVRTCNFS 442
RLWD+ +GK + TL++ S V + S
Sbjct: 171 RLWDVRSGKIVQTLETKSPVTSAEVS 196
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/93 (27%), Positives = 50/93 (53%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
L+ +GH R++ I + ++G L S DS VW G + F GH ++ ++
Sbjct: 375 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN 434
Query: 326 SINLITGGGDSSCRLWDLETGKNIATLKSNSSV 424
+L +GG D+ CR+WDL K++ + +++++
Sbjct: 435 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL 467
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 334
+GH + ++ ++ G L + + D +W G L GH ++ +
Sbjct: 336 EGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGAL 395
Query: 335 LITGGGDSSCRLWDLETGKNIATLKSN-SSVRTCNFSYSAYQAA 463
+ G DS R+WDL TG++I + + V + NFS + Y A
Sbjct: 396 AASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLA 439
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 149 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
++ H ++Q+KY +EG L +A+ D K N+W + + + GH + LD+
Sbjct: 460 IIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITAD 519
Query: 326 SINLITGGGDSSCRLW 373
S + T D + +LW
Sbjct: 520 SSCIATVSHDRTIKLW 535
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/87 (27%), Positives = 47/87 (54%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
GH+ I+ + ++ + + SA+ D +W G + T GH +C++ + QS +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 338 ITGGGDSSCRLWDLETGKNIATLKSNS 418
++G D + R+WD+ TGK + L ++S
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLPAHS 155
Score = 48.0 bits (109), Expect = 8e-06
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW--SLN---GERLGTFNGHGGVIWCLDV 316
L H RA++ +K++ +G LL SA+ D + ++N E + F GH I +
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 317 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC-NFS 442
+ +++ D + +LWD+ETG I TL +++ C NF+
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFN 122
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/85 (23%), Positives = 37/85 (43%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH + +N + +++ S + D +W G+ L H + +D +
Sbjct: 109 LIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGS 168
Query: 332 NLITGGGDSSCRLWDLETGKNIATL 406
+++ D CR+WD TG + TL
Sbjct: 169 LIVSSSYDGLCRIWDSGTGHCVKTL 193
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGT-FNGHGGVIWCLDVDWQ 325
+L H +T + +NR+G L+ S++ D +W S G + T + + +
Sbjct: 150 VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPN 209
Query: 326 SINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 433
++ G D++ RLW++ + K + T + + + C
Sbjct: 210 GKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYC 245
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/85 (17%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 173 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN---LIT 343
++ ++++ G + D+ +W + + L T+ GH +C+ + N +++
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 344 GGGDSSCRLWDLETGKNIATLKSNS 418
G D+ +W+L + K + L+ ++
Sbjct: 261 GSEDNCVHMWELNSKKLLQKLEGHT 285
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE--RLGTFNGHGGVIWCLDVD 319
++L GH A+ +K+N G L+ S + D + +W ++G+ GH I LD+
Sbjct: 47 MLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLW-RVHGDCKNFMVLKGHKNAI--LDLH 103
Query: 320 WQS--INLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTC 433
W S +++ D + R WD+ETGK I + +SS V +C
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSC 144
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 173 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 352
IT + ++ D +F+ D+ VW GE T GH I + + L+T G
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 353 DSSCRLWDL 379
D+ +WD+
Sbjct: 243 DNKLCVWDM 251
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNGERLGTFNGHGGVIW--C 307
+ L+GHQ IT + + +G L + D+K VW ++ + F GH
Sbjct: 216 MTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNL 275
Query: 308 LDVDW--QSINLITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNF 439
L W + G D +WD + + I L ++ SV C F
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVF 322
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 335 LITGGGDSSCRLWDLETGKNIATLKSNSSVRT 430
+ TGG D+ ++WDL G+ TL+ + T
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTIT 226
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 334
+GH R I+ I++ +G + S D+ VW G+ L F H G I LD
Sbjct: 139 KGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFL 198
Query: 335 LITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 439
L TG D + + WDLET + I + + ++ VR+ F
Sbjct: 199 LATGSADRTVKFWDLETFELIGSTRPEATGVRSIKF 234
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
GH+ + ++++ G+ L S + D+ +W + T+ GH I + +
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWV 157
Query: 338 ITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 439
++GG D+ ++WDL GK + K + +R+ +F
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDF 192
Score = 35.1 bits (77), Expect = 0.063
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
+ L GH A+ + ++ L+ + A +W + + F GH C V++
Sbjct: 52 MSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSN--CSAVEFH 109
Query: 326 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFS 442
L +G D++ ++WD+ I T K +S + T F+
Sbjct: 110 PFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFT 151
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/72 (22%), Positives = 28/72 (38%)
Frame = +2
Query: 206 LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLET 385
L + D K N+W L + GH + + D + ++ G +LWD+E
Sbjct: 30 LFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEE 89
Query: 386 GKNIATLKSNSS 421
K + + S
Sbjct: 90 AKMVRAFTGHRS 101
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 GERLGTFNGHGGVIWCLDVDWQSINL-ITGGGDSSCRLWDLETGKNIATLKSNSS 421
G +L F H + CL + ++ L ITGG D LW + ++ +L ++S
Sbjct: 5 GYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTS 59
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 334
+GH R I+ I+++ +G + S D+ VW G+ L F H G I LD
Sbjct: 88 KGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFL 147
Query: 335 LITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 439
L TG D + + WDLET + I T + ++ VR F
Sbjct: 148 LATGSADRTVKFWDLETFELIGTTRPEATGVRAIAF 183
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
GH+ + ++++ G+ L S + D+ VW + + T+ GH I ++ +
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV 106
Query: 338 ITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 439
++GG D+ ++WDL GK + K + +R+ +F
Sbjct: 107 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF 141
Score = 37.1 bits (82), Expect = 0.016
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
+ L GH + + +N E L+ + A +W + + F GH C V++
Sbjct: 1 MSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSN--CSAVEFH 58
Query: 326 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFS 442
L +G D++ R+WD I T K ++ + T FS
Sbjct: 59 PFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFS 100
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/80 (27%), Positives = 44/80 (55%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GHQ+ + + ++ +G + SA+ D +W + G+ + F GH G ++ + S
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSR 415
Query: 332 NLITGGGDSSCRLWDLETGK 391
L++G DS+ ++W++ T K
Sbjct: 416 LLLSGSKDSTLKIWEIRTKK 435
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 328
+ +GH + Q+ ++ + LL S +KDS +W + GH ++ +D
Sbjct: 397 VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDG 456
Query: 329 INLITGGGDSSCRLW 373
+++GG D +LW
Sbjct: 457 EKVVSGGKDRVLKLW 471
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 275 TFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSS 421
T GH + C+ L +G GD++ RLWDL T + T K + +
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKN 152
Score = 36.3 bits (80), Expect = 0.027
Identities = 23/92 (25%), Positives = 45/92 (48%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
+ L GH A+T +K+ +G ++++ ++D +W + G+ + GHG I L + +
Sbjct: 235 ICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE 293
Query: 326 SINLITGGGDSSCRLWDLETGKNIATLKSNSS 421
+ L TG D + R + K A + N +
Sbjct: 294 YV-LRTGAFDHTGRQYPPNEEKQKALERYNKT 324
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW--Q 325
+ GH A+ + ++ +G L S + D+ +W L T GH W L V W
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKN--WVLTVAWSPD 162
Query: 326 SINLITGGGDSSCRLWDLETGK 391
+L++G W+ + G+
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGE 184
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 334
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 233 KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFL 292
Query: 335 LITGGGDSSCRLWDLET 385
L TG D + + WDLET
Sbjct: 293 LATGSADKTVKFWDLET 309
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH+ + ++ G+ S + D+ +W + T+ GH + L
Sbjct: 190 LTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 249
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSN 415
+++GG D+ ++WDL GK + KS+
Sbjct: 250 WIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 161 HQRAITQIKYNREGD-LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
H A+ +K R+ +L + +D K N+W + + GH I + D +
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 167
Query: 338 ITGGGDSSCRLWDLETGKNIATLKSNSS 421
G + +LWDLE K + TL + S
Sbjct: 168 AAGAASGTIKLWDLEEAKVVRTLTGHRS 195
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
L L GH I + ++ L+ + A +W + + T GH C+ V++
Sbjct: 146 LSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSN--CVSVNFH 203
Query: 326 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS 418
+G D++ ++WD+ I T K ++
Sbjct: 204 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 236
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
L L GH + + + +FSA D + W + + +++GH ++CL +
Sbjct: 212 LTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPT 271
Query: 326 SINLITGGGDSSCRLWDLETGKNIATLKSNSS 421
L+TGG DS CR+WD+ T I L + +
Sbjct: 272 LDVLLTGGRDSVCRVWDIRTKMQIFALSGHDN 303
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
GH + + + D+L + +DS VW ++ +GH + + +
Sbjct: 258 GHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQV 317
Query: 338 ITGGGDSSCRLWDLETGKNIATLKSN-SSVR 427
+TG D++ + WDL GK ++TL + SVR
Sbjct: 318 VTGSHDTTIKFWDLRYGKTMSTLTHHKKSVR 348
Score = 35.5 bits (78), Expect = 0.047
Identities = 21/95 (22%), Positives = 38/95 (40%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 328
++QGH + + ++ + + + D +W G T GH + L V +
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 329 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 433
+ + G D + WDLE K I + + S C
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYC 265
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 51.6 bits (118), Expect = 7e-07
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 334
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 335 LITGGGDSSCRLWDLET 385
L TG D + + WDLET
Sbjct: 200 LATGSADRTVKFWDLET 216
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 161 HQRAITQIKYNREGD-LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
H A+ +K R+ +L + +D K N+W + + GH I + D + +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 338 ITGGGDSSCRLWDLETGKNIATLKSNSS 421
G + +LWDLE K + TL + S
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH+ + ++ G+ S + D+ +W + T+ GH + L
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSN 415
+++GG D+ ++WDL GK + KS+
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
L L GH I + ++ L+ + A +W + + T GH C+ VD+
Sbjct: 53 LSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN--CISVDFH 110
Query: 326 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS 418
+G D++ ++WD+ I T K ++
Sbjct: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 266 RLGTFNGHGGVIWCLDVDWQSIN-LITGGGDSSCRLWDLETGKNIATLKSNSS 421
+L F H + CL + +S L+TGG D LW + I +L +SS
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 51.6 bits (118), Expect = 7e-07
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 334
+GH R + +++ +G + S +D+ VW G+ L F H G I LD
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFL 199
Query: 335 LITGGGDSSCRLWDLET 385
L TG D + + WDLET
Sbjct: 200 LATGSADRTVKFWDLET 216
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 161 HQRAITQIKYNREGD-LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
H A+ +K R+ +L + +D K N+W + + GH I + D + +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 338 ITGGGDSSCRLWDLETGKNIATLKSNSS 421
G + +LWDLE K + TL + S
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRS 102
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/88 (23%), Positives = 40/88 (45%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH+ + ++ G+ S + D+ +W + T+ GH + L
Sbjct: 97 LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSN 415
+++GG D+ ++WDL GK + KS+
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
L L GH I + ++ L+ + A +W + + T GH C+ VD+
Sbjct: 53 LSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSN--CISVDFH 110
Query: 326 SIN--LITGGGDSSCRLWDLETGKNIATLKSNS 418
+G D++ ++WD+ I T K ++
Sbjct: 111 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHT 143
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 266 RLGTFNGHGGVIWCLDVDWQSIN-LITGGGDSSCRLWDLETGKNIATLKSNSS 421
+L F H + CL + +S L+TGG D LW + I +L +SS
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSS 60
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
L L GH + + + +FSA D + W + + +++GH ++CL +
Sbjct: 206 LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPT 265
Query: 326 SINLITGGGDSSCRLWDLETGKNIATLKSNSSV 424
++TGG DS CR+WD+ T I L +S V
Sbjct: 266 LDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDV 298
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/83 (25%), Positives = 35/83 (42%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 328
+LQGH + + ++ + + + D +W G T GH G + L V +
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRH 224
Query: 329 INLITGGGDSSCRLWDLETGKNI 397
+ + G D + WDLE K I
Sbjct: 225 TYMFSAGDDKQVKCWDLEQNKVI 247
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/86 (23%), Positives = 40/86 (46%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
GH + + + D++ + +DS VW ++ H ++ + +
Sbjct: 252 GHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQV 310
Query: 338 ITGGGDSSCRLWDLETGKNIATLKSN 415
ITG DS+ + WDL GK++AT+ ++
Sbjct: 311 ITGSHDSTIKFWDLRYGKSMATITNH 336
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +2
Query: 197 EGDLLFSAAKDSKPNVW----WSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSC 364
E +L +A + P+ W W + GH G + + D + TG D +
Sbjct: 135 ERNLSTAALMERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTI 194
Query: 365 RLWDLETG 388
++WD+ TG
Sbjct: 195 KIWDVATG 202
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/72 (36%), Positives = 34/72 (47%)
Frame = +2
Query: 161 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 340
H ++ +K+ R LFS KD W + E L T GH IWCL + + L+
Sbjct: 623 HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLV 682
Query: 341 TGGGDSSCRLWD 376
TG D S R WD
Sbjct: 683 TGSHDRSMRRWD 694
Score = 44.8 bits (101), Expect = 8e-05
Identities = 23/90 (25%), Positives = 44/90 (48%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L+GH+ +T + + G L S++KD VW + +GH +W +D D +
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSNSS 421
++TG D R + ++ + +L S+S+
Sbjct: 204 YVVTGSADQELRFYAVKEYSSNGSLVSDSN 233
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +2
Query: 161 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 340
H+ A+T ++YN+ G +L S +KD+ +W + L GH + L L+
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 341 TGGGDSSCRLWDLET 385
+ D R+WDLET
Sbjct: 165 SSSKDKFLRVWDLET 179
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/96 (20%), Positives = 44/96 (45%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
L L GH+ + I + +G+L+ + ++D +W G+ + HG + +
Sbjct: 576 LSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRN 635
Query: 326 SINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 433
+ L + G D + WD + +++ TL+ + + C
Sbjct: 636 THYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWC 671
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
G A+T I + L+ D +W + G FN H G + L + L
Sbjct: 63 GPSLAVTSIA-SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSML 121
Query: 338 ITGGGDSSCRLWDL 379
+G D+ LWD+
Sbjct: 122 ASGSKDNDIILWDV 135
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +2
Query: 158 GHQRAITQIKY-NREGDLLFSAAKDSKPNVWWSLN-GERLGTFNGHGGVIWCLDVDWQSI 331
GH + ++ I++ ++G LL SA D K +W N G+ + T+ GH + +
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKS 412
+T G D + + WD ETG+ I+T +
Sbjct: 340 KFLTAGYDKNIKYWDTETGQVISTFST 366
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/89 (24%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNG-ERLGTFNGHGGVIWCLDVDWQSI 331
+GH I+ + ++ + SA+ D +W + + E L GH ++C++ + S
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSNS 418
+++G D + R+W+++TGK + +K++S
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L+GH AI+ +K++ +G+LL SA+ D +W + N + + GH I D+ W S
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGI--SDLAWSSD 96
Query: 332 NLITGGGDSSC--RLWD 376
+ T C R+WD
Sbjct: 97 SHYTCSASDDCTLRIWD 113
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/91 (21%), Positives = 41/91 (45%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 328
+L+GH + + +N +L+ S + D +W G+ + H I + +
Sbjct: 123 VLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDG 182
Query: 329 INLITGGGDSSCRLWDLETGKNIATLKSNSS 421
+++ D SC++WD + G + TL + S
Sbjct: 183 SLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 213
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 170 AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN---LI 340
A++ K++ G + A DS + G+ L + GH ++C+ + N ++
Sbjct: 215 AVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIV 274
Query: 341 TGGGDSSCRLWDLETGKNIATLKSNS 418
+G D+ LWDL+ + L+ ++
Sbjct: 275 SGSEDNCVYLWDLQARNILQRLEGHT 300
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 48.8 bits (111), Expect = 5e-06
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 328
+L+GH+ A+ ++N +G+ + KD +W G + T+ HG + + V +
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDN 72
Query: 329 INLITGGGDSSCRLWDLETGKNIATLKS-NSSVRTCNFSYSA 451
+ GGD WD+ TG+ I + + V F+ S+
Sbjct: 73 AKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSS 114
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/74 (22%), Positives = 30/74 (40%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 334
+ H R + + + S D + W G + F GH G + + + S
Sbjct: 57 KSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSV 116
Query: 335 LITGGGDSSCRLWD 376
+++ G D S R+WD
Sbjct: 117 VVSAGFDRSLRVWD 130
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 48.4 bits (110), Expect = 6e-06
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +2
Query: 155 QGHQRAITQIKY--NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 328
+GH+ ++ +++ N + SA+ D VW N + T GH G + + V
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 329 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTD 475
+GG D LWDL GK + +L++NS + FS + Y T+
Sbjct: 207 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATE 255
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/75 (18%), Positives = 30/75 (40%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH + + + +G S + D + +W G F GH + + +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 332 NLITGGGDSSCRLWD 376
+++ D + +LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFN----GHGGVIWCLDVDWQ 325
GH + + + ++ + + SA++D +W +L GE T + GH + C+
Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPN 161
Query: 326 SI--NLITGGGDSSCRLWDLETGKNIATLKSNS 418
++ +++ D + ++W+L K +TL ++
Sbjct: 162 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT 194
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 48.0 bits (109), Expect = 8e-06
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = +2
Query: 173 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 352
+T + +N EG LL + + D + +W +LNGE + T + H G I+ L + + L+TG
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSV 385
Query: 353 DSSCRLWDLE 382
D + +WD++
Sbjct: 386 DRTAVVWDVK 395
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 209 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETG 388
L SA+ DS +W + G+ L +FNGH ++ L + +G D S +W ++ G
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Query: 389 KNIATLKSNSSV 424
K + T N +
Sbjct: 574 KIVKTYTGNGGI 585
Score = 37.5 bits (83), Expect = 0.012
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ-S 328
L H+ I +K+N++GD L + + D VW E F H G LDVDW+ +
Sbjct: 361 LSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGP--TLDVDWRNN 418
Query: 329 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 433
++ T DS L + + T + C
Sbjct: 419 VSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNC 453
Score = 35.5 bits (78), Expect = 0.047
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--------- 310
GHQ + +K++ G LL S + DS +W + H I+ +
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGT 505
Query: 311 DVDWQSINLITGGGDSSCRLWDLETGKNIATLKSN-SSVRTCNFSYSA-YQAAYTTDKAM 484
+ + + L + DS+ +LWD E GK + + + V + FS + Y A+ + DK++
Sbjct: 506 NNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSI 565
Score = 33.1 bits (72), Expect = 0.25
Identities = 11/47 (23%), Positives = 26/47 (55%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGV 298
GH+ + + ++ G+ + S + D ++W G+ + T+ G+GG+
Sbjct: 539 GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGI 585
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 275 TFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNS 418
TF GH G + C+ D L + DS+ ++W+++ + L+ ++
Sbjct: 443 TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHT 490
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L+GH+R I ++++ + +A+ D +W +G L TF GH +
Sbjct: 537 LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGT 596
Query: 332 NLITGGGDSSCRLWDLETGKNIAT 403
++ G D +LW++ T + IAT
Sbjct: 597 QFVSCGADGLLKLWNVNTSECIAT 620
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 334
+GH ++ + + +G S D +W E + T++ H +W L V ++
Sbjct: 580 EGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEM 639
Query: 335 LITGGGDSSCRLWDLETGKN 394
+ TGGGD+ LW T +
Sbjct: 640 IATGGGDAVINLWHDSTASD 659
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--DVDWQS 328
+GH+ + + + G LL +A D K VW G F GH GV+ + D
Sbjct: 99 KGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNK 158
Query: 329 INLITGGGDSSCRLWDL 379
LI+G D++ R+WDL
Sbjct: 159 NILISGSDDATVRVWDL 175
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/98 (19%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +2
Query: 131 LNMKPL-MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 307
+N+K ++ H + I + R L+ + ++D ++W + + T GH I+
Sbjct: 487 INLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFS 546
Query: 308 LDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSS 421
++ ++T GD + ++W + G + T + ++S
Sbjct: 547 VEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTS 584
Score = 35.1 bits (77), Expect = 0.063
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
++G +T + + + LLFSA + VW + + ++ GH G + +
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGG 115
Query: 332 NLITGGGDSSCRLWDLETG 388
L T G D +WD++ G
Sbjct: 116 LLATAGADRKVLVWDVDGG 134
Score = 34.7 bits (76), Expect = 0.083
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +2
Query: 149 MLQGHQRAITQIK--YNREGDLLF-SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD 319
+L GH+ + + + G++L + +KD +W + + +G GH G I +
Sbjct: 396 VLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFA 455
Query: 320 WQSIN-LITGGGDSSCRLWDLE 382
+S + ++G GD + ++W L+
Sbjct: 456 KKSFSFFVSGSGDRTLKVWSLD 477
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 247
+++ H A+T I + +G LFSA +D N+W
Sbjct: 187 IMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 158 GHQRAITQIKY--NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
GH+ ++ +++ N + SA+ D VW N + T GH G + + V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAM 484
+GG D LWDL GK + +L++ S + + FS + Y T+ ++
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSI 257
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH + + + +G L S KD +W G++L + G +I L +
Sbjct: 189 LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFS-PNR 246
Query: 332 NLITGGGDSSCRLWDLETGKNIATLK 409
+ ++S R+WDLE+ + LK
Sbjct: 247 YWLCAATENSIRIWDLESKSVVEDLK 272
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/75 (18%), Positives = 31/75 (41%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
+ GH + + + +G S + D + +W GE F GH + + +
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 332 NLITGGGDSSCRLWD 376
+++ D + +LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE---RLGTFNGHGGVIWCLDVDWQS 328
GH + + + ++ + + SA++D +W +L GE + +GH + C+ +
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNT 161
Query: 329 I--NLITGGGDSSCRLWDLETGKNIATLKSNS 418
+ +++ D + ++W+L+ K TL +S
Sbjct: 162 LVPTIVSASWDKTVKVWNLQNCKLRNTLAGHS 193
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
L QGH + + Y+ + LL + A D+K VW ++G TF H + L
Sbjct: 343 LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMAD 402
Query: 326 SINLITGGGDSSCRLWDLETGKNIAT 403
+ +L++ D + R WD + KN T
Sbjct: 403 NHSLLSASLDGTVRAWDFKRYKNYKT 428
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGD-LLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDW 322
+L ++ +T +N G+ L F AK + VW W L GH + C+
Sbjct: 301 LLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQ-QGHYFDVNCVTYSP 359
Query: 323 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 430
S L TG D+ ++W++ +G T +++ T
Sbjct: 360 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVT 395
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/86 (29%), Positives = 40/86 (46%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
L QGH + + Y+ + LL + A D+K VW ++G TF H + L
Sbjct: 383 LKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMAD 442
Query: 326 SINLITGGGDSSCRLWDLETGKNIAT 403
+ +L++ D + R WD + KN T
Sbjct: 443 NHSLLSASLDGTVRAWDFKRYKNYKT 468
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGD-LLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDW 322
+L ++ +T +N G+ L F AK + VW W L GH + C+
Sbjct: 341 LLSISRQKLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQ-QGHYFDVNCVTYSP 399
Query: 323 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 430
S L TG D+ ++W++ +G T +++ T
Sbjct: 400 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVT 435
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 45.2 bits (102), Expect = 6e-05
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSL--NGE-----RLG-TFNGHGGVIW 304
+L GH + + ++++ D+LFS + D+ VWWS +GE LG + NGH +W
Sbjct: 158 VLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 305 CLDVDWQSINLITGGGDSSCRLWDLETGK 391
+ + ++T D + ++W + K
Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIWGTDIAK 246
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 140 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW--WSLNGERLGTFNGHGGVIWCLD 313
K ++ + H R + ++ G LL +A+ D +W + E + T GH + +
Sbjct: 66 KTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVS 125
Query: 314 VDWQSINLITGGGDSSCRLWDLETG 388
+ L T D S +W++ G
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEG 150
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 44.8 bits (101), Expect = 8e-05
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 158 GHQRAITQIKY--NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
GH+ ++ +++ N + SA+ D VW N + + GH G + + V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAM 484
+GG D LWDL GK + +L++ S + + FS + Y T+ ++
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSI 257
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/75 (20%), Positives = 31/75 (41%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH + + + +G S + D + +W GE F GH + + +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 332 NLITGGGDSSCRLWD 376
+++ D + +LW+
Sbjct: 119 QIVSASRDRTIKLWN 133
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH + + + +G L S KD +W G++L + G +I L +
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFS-PNR 246
Query: 332 NLITGGGDSSCRLWDLETGKNIATLK 409
+ ++S R+WDLE+ + LK
Sbjct: 247 YWLCAATENSIRIWDLESKSVVEDLK 272
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/82 (18%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW--CLDVDWQSI 331
GH + + + ++ + + SA++D +W +L + G G W C+ ++
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTL 162
Query: 332 --NLITGGGDSSCRLWDLETGK 391
+++ D + ++W+L+ K
Sbjct: 163 VPTIVSASWDKTVKVWNLQNCK 184
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDWQS 328
LQ H I + + L +A+ D +W +L+G +L GH +W D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIW-NLDGFKLEKVLTGHERWVWDCDFSMDG 271
Query: 329 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 433
L+T D++ RLW + GK +++ C
Sbjct: 272 EYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVC 306
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 307
+L GH+R + ++ +G+ L +A+ D+ +W G+ + H C
Sbjct: 254 VLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVC 306
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHG---GVIWCLDVD 319
M GH +T + +G L+ + + D+ VW E + GH + CLD++
Sbjct: 192 MFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDIN 251
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFSYSA 451
S I+G D S + ++ TGK +++L S++ SV FS S+
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSS 296
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 257 NGERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSN-SSVRT 430
N + + TF GH G ++ L L+ TGGGD LW + G A L + SV
Sbjct: 59 NDDSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSC 118
Query: 431 CNFSY 445
FSY
Sbjct: 119 LAFSY 123
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/89 (22%), Positives = 43/89 (48%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 328
+L G I ++++ G ++ + ++D +W + L F+GH + C D
Sbjct: 150 VLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDG 209
Query: 329 INLITGGGDSSCRLWDLETGKNIATLKSN 415
+ TG D+S +W+ +T ++I +K +
Sbjct: 210 KLICTGSDDASLIVWNPKTCESIHIVKGH 238
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +2
Query: 161 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL- 337
H +T + N L S +KD ++ + G+ + + N H + C+ S +
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIP 300
Query: 338 --ITGGGDSSCRLWDLE 382
TGG D +WDL+
Sbjct: 301 LAATGGMDKKLIIWDLQ 317
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/87 (18%), Positives = 40/87 (45%)
Frame = +2
Query: 143 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW 322
P + H+ +T + + L + + ++W SL G + T++GH + + V
Sbjct: 321 PRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVST 380
Query: 323 QSINLITGGGDSSCRLWDLETGKNIAT 403
+ +++ D++ R+++ +N T
Sbjct: 381 NTDFIVSVSVDNTARVFESSEFQNKVT 407
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +2
Query: 197 EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWD 376
+ L+ + D K +W NG+ GH + CL + L +GG D +++D
Sbjct: 82 DATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFD 141
Query: 377 LETG 388
+G
Sbjct: 142 ASSG 145
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI---W---CLDVD 319
GH A+T + +R G+ + ++ +D+ NV+ + E GT G + W C+ D
Sbjct: 397 GHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPD 456
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNFS 442
+ G D S +W L G ++ LK +S + C++S
Sbjct: 457 DDYV--AAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWS 496
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +2
Query: 197 EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWD 376
+G +FS D +W G+ L GH + + + ++T G D+ ++D
Sbjct: 368 DGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFD 427
Query: 377 LETGKNIATLKSNSSVRTCNFSYS 448
T + TL+++ + N+S S
Sbjct: 428 TRTLEICGTLRASGNRLASNWSRS 451
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 281 NGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATL 406
+ H G + ++ S L TGG D + ++WD +G I +L
Sbjct: 228 HAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSL 269
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW-QSIN 334
GH + + ++ LL S KD +W + +G L + +GH ++ L V W Q+ N
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIV--LSVKWNQNGN 323
Query: 335 -LITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPC 496
L+T D +L+D+ T K + + + ++ T + ++ + + + G C
Sbjct: 324 WLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSIC 378
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH+ + +K+N+ G+ L +A+KD ++ + L +F GH + L W
Sbjct: 306 LHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSL--AWHPC 363
Query: 332 N---LITGGGDSSCRLW 373
+ ++G D S W
Sbjct: 364 HEEYFVSGSSDGSICHW 380
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 738 DGTMFITASKDHTAKLFDTNSLXLLKEYR 824
+G +TASKD KL+D ++ L+ +R
Sbjct: 321 NGNWLLTASKDQIIKLYDIRTMKELQSFR 349
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +2
Query: 143 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW 322
P + +GH+ ++ + N G +L S + VW G + GH + L +D
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
Query: 323 QSINLITGGGDSSCRLWDLETGKNIATLKSNSS---VRTCNFSYS 448
++G DS RLWDL + + T ++ CN S+S
Sbjct: 266 TGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Score = 36.3 bits (80), Expect = 0.027
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = +2
Query: 140 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDV 316
K + L+GH + + + G S + DS + W L +R L T+ H +W L
Sbjct: 247 KSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRL-WDLGQQRCLHTYAVHTDSVWALAC 305
Query: 317 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAM 484
+ ++ +GG D L DL T +++ ++ ++ A TTD ++
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNSIWVA-TTDSSV 360
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +2
Query: 143 PLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW 322
P + +GH+ ++ + N G +L S + VW G + GH + L +D
Sbjct: 206 PTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDS 265
Query: 323 QSINLITGGGDSSCRLWDLETGKNIATLKSNSS---VRTCNFSYS 448
++G DS RLWDL + + T ++ CN S+S
Sbjct: 266 TGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Score = 36.3 bits (80), Expect = 0.027
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = +2
Query: 140 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDV 316
K + L+GH + + + G S + DS + W L +R L T+ H +W L
Sbjct: 247 KSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRL-WDLGQQRCLHTYAVHTDSVWALAC 305
Query: 317 DWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAM 484
+ ++ +GG D L DL T +++ ++ ++ A TTD ++
Sbjct: 306 NPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNSIWVA-TTDSSV 360
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDW 322
L L GH+ +I +I ++ +G + S + D +W + E +G GH +W D
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVW--DCCI 286
Query: 323 QSINLITGGGDSSCRLWDLETGKNIATLKSN 415
++T G D +CR+W ++ G + +K +
Sbjct: 287 SDSLIVTAGEDCTCRVWGVD-GTQLEVIKEH 316
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDW 322
L L GH+ +I +I ++ +G + S + D +W + E +G GH +W D
Sbjct: 229 LRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVW--DCCI 286
Query: 323 QSINLITGGGDSSCRLWDLETGKNIATLKSN 415
++T G D +CR+W ++ G + +K +
Sbjct: 287 SDSLIVTAGEDCTCRVWGVD-GTQLEVIKEH 316
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 173 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 352
I + + + +F+AA DS W +G+ TF GH + + + ++TG
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 353 DSSCRLWDLETGKNIATLKS 412
D + R+WD +TGK + + S
Sbjct: 222 DGTARIWDCKTGKCVKVIGS 241
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 308 LDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNS 418
+ VD QS ++ T GDS WD+E+GK T K +S
Sbjct: 165 MSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHS 201
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/97 (22%), Positives = 43/97 (44%)
Frame = +2
Query: 161 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 340
H + +T + ++R+G L S + D + +G+ L F GH + +I
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 341 TGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSA 451
T D + ++WD +T + T K +R + S ++
Sbjct: 364 TASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNS 400
Score = 33.1 bits (72), Expect = 0.25
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Frame = +2
Query: 185 KYNREGDLLFSAAKDSKPNVWWSLNGERLG--------TFNGHGGVIWCLDVDWQSINLI 340
+++ +G L S++ D VW ++G+ +F H + C+D S L
Sbjct: 220 RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLA 279
Query: 341 TGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFSYSAYQAAYTT 472
+G D ++W + TG I ++S V + +FS Q T+
Sbjct: 280 SGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTS 324
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 720 YATXLVDGTMFITASKDHTAKLFDTNSLXLLKEYR 824
+A DG+ ITAS D T K++D+ + L+ ++
Sbjct: 352 HAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFK 386
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 152 LQGHQRAITQIKYNR-EGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 328
L+GH + + ++ + +LFS + D N+ + LG+ +GH + +D
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 329 INLITGGGDSSCRLWDLETGKNIATLKSNS 418
+ TG D + RLWDL+ I T+ +++
Sbjct: 256 GAIATGSSDRTVRLWDLKMRAAIQTMSNHN 285
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ-SIN 334
GH + + + G + S++ DS V+ + +W + + + +I
Sbjct: 58 GHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTIL 117
Query: 335 LITGGGDSSCRLWDLETGKNIATL 406
+ GG +S +LWD + + I+TL
Sbjct: 118 AVAGGSSASVKLWDTASWRLISTL 141
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 41.5 bits (93), Expect = 7e-04
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +2
Query: 140 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD 319
KPL + + +I +N GD F V + + L T H +C+ +D
Sbjct: 141 KPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTLTAHTAGCYCIAID 200
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATL-KSNSSVRTCNFSYSA-YQAAYTTD 475
+ G DS LWD+ + T K VRT +F+YS Y A+ + D
Sbjct: 201 PKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASED 254
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLG---TFNGHGGVIWCLDVDW 322
QGH++ + + +N G L S + D +W +G GH + L D
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 323 QSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSY 445
+ +L+ T GD S RLWD +GK T + S N +Y
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGK--CTQQVELSGENINITY 116
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFN-GHGGVIWCLDVDWQS 328
L+GHQ + + +N G LL S + D + N+W + + L + + GH I+C ++
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 329 IN--LITGGGDSSCRLWD 376
+ +++G GD+ RL++
Sbjct: 106 SDELVVSGAGDAEVRLFN 123
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/104 (25%), Positives = 47/104 (45%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L+GH+ A+ ++R G + + + D +W L + GH G I L V +
Sbjct: 301 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA 360
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAA 463
+ + D R+W L G I+ L+ ++ T ++S QA+
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTGAVTA-IAFSPRQAS 403
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 334
+GH+ IT + + L+ SA+ D VW +G + GH G + + + +
Sbjct: 344 RGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQAS 403
Query: 335 ---LITGGGDSSCRLWD 376
L++ D +CR+WD
Sbjct: 404 VYQLLSSSDDGTCRIWD 420
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +2
Query: 185 KYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSC 364
K++R +L + +KP+ + + GH ++C D +ITG D
Sbjct: 271 KHHRAPSILSACHAIAKPSTMVQ-KMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLV 329
Query: 365 RLWDLETGKNIATLKSN 415
++W +ET +A+ + +
Sbjct: 330 KIWSMETALCLASCRGH 346
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 167 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV-DWQSINLIT 343
R + I ++ + + +A D + VW + +G + GH + LDV + ++
Sbjct: 598 RGVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMS 657
Query: 344 GGGDSSCRLWDLETG 388
G D +WD+ G
Sbjct: 658 AGYDGKTIIWDIWEG 672
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 131 LNMKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 310
LN + +GH + +++ G S + D +W + L GH
Sbjct: 449 LNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGH-----LS 503
Query: 311 DVDWQ-SINLI-TGGGDSSCRLWDLETGK 391
DVDW + N I TG D + RLWD++TG+
Sbjct: 504 DVDWHPNCNYIATGSSDKTVRLWDVQTGE 532
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/80 (20%), Positives = 33/80 (41%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
GH+ + + + +G + S +D +W + GH +W L + L
Sbjct: 539 GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLL 598
Query: 338 ITGGGDSSCRLWDLETGKNI 397
+G D + +LWD+ + +
Sbjct: 599 ASGSADCTVKLWDVTSSTKL 618
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +2
Query: 137 MKPL-MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD 313
++PL ++ GH ++ + ++ + + + + D +W GE + F GH ++ L
Sbjct: 492 IQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLA 548
Query: 314 VDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 448
+ + +G D + +WDL T + I L ++S + SYS
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSC-VWSLSYS 592
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/78 (19%), Positives = 32/78 (41%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQS 328
+L GH + ++ GD + S++ D+ +W + L + GH +W
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 329 INLITGGGDSSCRLWDLE 382
+ D + R+W ++
Sbjct: 473 HYFASCSHDRTARIWSMD 490
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 247
L GH + + Y+ EG LL S + D +W
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L+GH ++ + ++ + D++ S ++D VW + L TF W L V +
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVH-PEM 302
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSNS 418
NL+ G DS ++ LE + L +S
Sbjct: 303 NLLAAGHDSGMIVFKLERERPAFALSGDS 331
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/76 (21%), Positives = 33/76 (43%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH I ++++ E + SA+ D +W + + GH + C +
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 332 NLITGGGDSSCRLWDL 379
+++ D + R+WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW--SLNGERLGTFNGHGGVIWCLDVDW 322
+L+GH R + ++ L+ S A D + +W + T GH + +
Sbjct: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 323 QSINLITGGGDSSCRLWDLETGKNIATLK 409
+ +++ D S R+WD + T +
Sbjct: 259 KQDIIVSNSEDKSIRVWDATKRTGLQTFR 287
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 257 NGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL-ETGKNIATLKSN-SSVRT 430
NG+ +GT GH + + TG D +CR+WD + +++A LK N +VR+
Sbjct: 308 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRS 367
Query: 431 CNFS 442
F+
Sbjct: 368 IRFT 371
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 257 NGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL-ETGKNIATLKSN-SSVRT 430
NG+ +GT GH + + TG D +CR+WD + +++A LK N +VR+
Sbjct: 302 NGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRS 361
Query: 431 CNFS 442
F+
Sbjct: 362 IRFT 365
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/93 (25%), Positives = 41/93 (44%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L+GH+ A+ +R G + + + D VW L + GH G I L V +I
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 430
+ + D R+W L G ++ L+ ++ T
Sbjct: 301 FIASASNDCVIRVWRLPDGLPVSVLRGHTGAVT 333
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD---WQ 325
+GH+ IT + + + SA+ D VW +G + GH G + +
Sbjct: 284 RGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGS 343
Query: 326 SINLITGGGDSSCRLWD 376
L++ D +CR+WD
Sbjct: 344 PYQLLSSSDDGTCRIWD 360
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/51 (21%), Positives = 25/51 (49%)
Frame = +2
Query: 263 ERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSN 415
+ + GH ++C +D +ITG D ++W ++T +A+ + +
Sbjct: 236 QNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGH 286
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 167 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDV-DWQSINLIT 343
R + I ++ + + +A D + VW + +G + + GH + +DV + ++
Sbjct: 545 RGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMS 604
Query: 344 GGGDSSCRLWDLETG 388
G D +WD+ G
Sbjct: 605 AGYDGKTIVWDIWEG 619
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L+GH ++ + ++ + D++ S ++D VW + + TF W L V I
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVH-PEI 302
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSNS 418
NL+ G D+ ++ LE + L +S
Sbjct: 303 NLLAAGHDNGMIVFKLERERPAFALSGDS 331
Score = 35.1 bits (77), Expect = 0.063
Identities = 16/76 (21%), Positives = 33/76 (43%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH I ++++ E + SA+ D +W + + GH + C +
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 332 NLITGGGDSSCRLWDL 379
+++ D + R+WD+
Sbjct: 149 LVVSASLDQTVRVWDI 164
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW--SLNGERLGTFNGHGGVIWCLDVDW 322
+L+GH R + ++ L+ S A D + +W + T GH + +
Sbjct: 199 VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 323 QSINLITGGGDSSCRLWDLETGKNIATLK 409
+ +++ D S R+WD I T +
Sbjct: 259 KQDIIVSNSEDKSIRVWDATKRTGIQTFR 287
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGH---GGVIWCLDVD 319
+L+GH+ ++ + ++ LLF+ + D + +W ++ + + H GV+
Sbjct: 12 VLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASP 71
Query: 320 WQSIN-LITGGGDSSCRLWDLETG 388
W + +I+ G D + + WD+E G
Sbjct: 72 WLGEDKIISQGRDGTVKCWDIEDG 95
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L+GH+ I +K++ + L S D+K VW + + + F H + +
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 332 NLITGGG---DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 448
L+ GG D R W+ T ++ + +NS V CN +S
Sbjct: 348 GLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQV--CNLVWS 387
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 242 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 379
VW +L T GH + L V ++TG GD + R W++
Sbjct: 406 VWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 215 SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGK 391
S+ DS VW + F GH + +D +L +GG D+ CR+WDL K
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRK 205
Score = 36.7 bits (81), Expect = 0.021
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +2
Query: 140 KPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD 319
K ++L+GH+ +T + ++ D + A + W +G L TF G
Sbjct: 98 KIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTDGTLLQTFKASSGF------- 150
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATLKSN-SSVRTCNFSYSAYQAA 463
DS R+WDL T +NI + + V + +FS + Y A
Sbjct: 151 -----------DSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLA 188
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 131 LNMKPLM--LQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVI 301
L M+ L+ + H ++Q+KY +E L +A+ D N+W + + + GH +
Sbjct: 201 LRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKV 260
Query: 302 WCLDV 316
LD+
Sbjct: 261 ASLDI 265
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +2
Query: 149 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 319
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 418
LITG D + ++WD +T + TL+ ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Score = 31.5 bits (68), Expect = 0.77
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGD--LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
L HQ+ + + Y GD L + + D VW + T GH + + +
Sbjct: 181 LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE 240
Query: 326 SINLITGGGDSSCRLWDLET 385
+ITG D + R+W T
Sbjct: 241 LPIIITGSEDGTVRIWHATT 260
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 310
L GHQ+ +T I D L++A+KD +W +G+ G N GG + C+
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLN-LGGEVGCI 191
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG-TFNGHGGVIWCLDVDWQS 328
LQ H I + + L +A+ D +W +++G +L GH +W
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIW-NVDGFKLEKVLTGHQRWVWDCVFSVDG 265
Query: 329 INLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 433
L+T D + RLW + GK + + + C
Sbjct: 266 EFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC 300
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWC 307
+L GHQR + ++ +G+ L +A+ D +W G+ + + GH C
Sbjct: 248 VLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVC 300
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGH-GGVIWCLDVDW- 322
L GH+ + +++N GD+L S + D + +W W +L +GH V + +
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 323 QSINLITGGGDSSCRLWD-LETGK 391
+IT G D RL LE GK
Sbjct: 111 DDRTIITSGADGQVRLGQILENGK 134
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +2
Query: 149 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 319
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTG 196
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 418
LITG D + ++WD +T + TL+ ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHT 229
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGD--LLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQ 325
L H + + + Y GD L + + D VW + T GH + + +
Sbjct: 181 LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPE 240
Query: 326 SINLITGGGDSSCRLWDLET 385
+ITG D + R+W T
Sbjct: 241 LPIIITGSEDGTVRIWHATT 260
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLG--TFNGHGGVIWCLDVDW 322
L GH + +T IK+ + DL+ +A+ D +W S +G T H + + V
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHA 319
Query: 323 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAY 454
+ ++ DS+ +DL +G +A + +++S N++ +A+
Sbjct: 320 TNKYFVSASLDSTWCFYDLSSGLCLAQV-TDASENDVNYTAAAF 362
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +2
Query: 176 TQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGD 355
T ++ +G +L + S +W + + F GH G I + L T D
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
Query: 356 SSCRLWDLETGKNIAT 403
RLWDL KN T
Sbjct: 418 -GVRLWDLRKLKNFRT 432
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +2
Query: 149 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 319
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 418
LITG D + ++WD +T + TL ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +2
Query: 149 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 319
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 418
LITG D + ++WD +T + TL ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +2
Query: 149 MLQGHQRAITQIKYN-REGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD--VD 319
+ +GH + Q+ +N ++ + SA+ D +W + + T + H + C+D
Sbjct: 137 IFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTG 196
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATLKSNS 418
LITG D + ++WD +T + TL ++
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 229
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/89 (24%), Positives = 40/89 (44%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L+GH ++ +K G+ + +AA D +W + T I L+ D +
Sbjct: 935 LKGHDSQVSCVKM-LSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSNS 418
L G D+ +WD+ +GK + LK ++
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLKGHT 1022
Score = 34.7 bits (76), Expect = 0.083
Identities = 23/90 (25%), Positives = 41/90 (45%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L+GH + I +R G ++ S + D VW + L GH + C+ +
Sbjct: 895 LKGHTGTVRAISSDR-GKIV-SGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSGE 951
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSNSS 421
++T D + ++WD+ T +AT+ SS
Sbjct: 952 RVLTAAHDGTVKMWDVRTDMCVATVGRCSS 981
Score = 32.3 bits (70), Expect = 0.44
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L+GH + I I+ D L + + D VW G H G + ++
Sbjct: 1018 LKGHTKWIRSIRMVE--DTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDK 1075
Query: 332 NLITGGGDSSCRLWDLETG-----KNIATLKSNS 418
+ITG D R W+ + G KNI TL S+S
Sbjct: 1076 GIITGSADGLLRFWENDEGGIKCVKNI-TLHSSS 1108
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 658 WDLRTGKKIHSVKEHTHQITDMQ 726
WD+R+GK++H +K HT I ++
Sbjct: 1007 WDIRSGKQMHKLKGHTKWIRSIR 1029
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 37.5 bits (83), Expect = 0.012
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG---TFNGHGGVIWCLDVDW 322
L GH + +T +K+ + DL+ +A+ D +W + T N H + + V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 323 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTD 475
+ ++ D + +DL +G +A + +S N Y+A AA+ D
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK----NVDYTA--AAFHPD 364
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/79 (24%), Positives = 32/79 (40%)
Frame = +2
Query: 176 TQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGD 355
T ++ +G +L + S +W + + F+GH G + + L T D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 356 SSCRLWDLETGKNIATLKS 412
RLWDL +N + S
Sbjct: 417 -GVRLWDLRKLRNFKSFLS 434
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 37.5 bits (83), Expect = 0.012
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG---TFNGHGGVIWCLDVDW 322
L GH + +T +K+ + DL+ +A+ D +W + T N H + + V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 323 QSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTD 475
+ ++ D + +DL +G +A + +S N Y+A AA+ D
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSK----NVDYTA--AAFHPD 364
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/79 (24%), Positives = 32/79 (40%)
Frame = +2
Query: 176 TQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGD 355
T ++ +G +L + S +W + + F+GH G + + L T D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 356 SSCRLWDLETGKNIATLKS 412
RLWDL +N + S
Sbjct: 417 -GVRLWDLRKLRNFKSFLS 434
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/85 (21%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 161 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF---NGHGGVIWCLDVDWQSI 331
H + I+Y+ +G + + D K ++ G+++G +GH G I+ + S
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 332 NLITGGGDSSCRLWDLETGKNIATL 406
++T D S ++W++ I ++
Sbjct: 110 RVLTVSADKSAKVWEVAEDGTIGSV 134
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +2
Query: 161 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW----CLDVDWQS 328
H A+ I+++ G+LL S A + +W E ++ H + + LD+ W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 329 IN--LITGGGDSSCRLWDLETG 388
+ LI+G D+SC +WD+ G
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKG 144
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +2
Query: 161 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIW----CLDVDWQS 328
H A+ I+++ G+LL S A + +W E ++ H + + LD+ W
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 329 IN--LITGGGDSSCRLWDLETG 388
+ LI+G D+SC +WD+ G
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKG 144
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 36.7 bits (81), Expect = 0.021
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREG-DLLFSAAKDSKPNVWWSLNGER--LGTFNGH-GGVIWCLDVD 319
+ GH A T + YN +LL + +KD +W N E + T N + GG+ +
Sbjct: 365 INGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSP 424
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVR 427
L GG +LWD + N+++ + VR
Sbjct: 425 DNPFLLAMGGVMGELKLWDTLSDTNVSSRYGSREVR 460
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 36.7 bits (81), Expect = 0.021
Identities = 17/76 (22%), Positives = 34/76 (44%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 334
+ H R + + +G L + D ++W E + F GH + CL + +
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSE 278
Query: 335 LITGGGDSSCRLWDLE 382
L +G D + ++W++E
Sbjct: 279 LYSGSFDRTVKVWNVE 294
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 36.3 bits (80), Expect = 0.027
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLD-VDWQS 328
L GH+ + +K++ + L S D++ VW + + + + H + + QS
Sbjct: 294 LVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQS 353
Query: 329 INLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 448
L +GGG D R W+ G + ++ + S V CN ++S
Sbjct: 354 SLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQV--CNLAWS 393
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/97 (19%), Positives = 34/97 (35%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
G ++ +++ REG + + VW +R+ T GH L W S L
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVL--AWNSRIL 270
Query: 338 ITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 448
+G D + D+ + + C +S
Sbjct: 271 SSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWS 307
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 269 LGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 430
L + GH G + C V Q L +G D + ++WDL T + I TLK ++ T
Sbjct: 251 LTSLEGHSGEVTCFAVGGQM--LYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVT 302
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 284 GHGGVIWCLD-VDWQSINLITGGGDSSCRLWDLETG 388
GH G + C V + +LIT GD +C LWD+ TG
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 35.9 bits (79), Expect = 0.036
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDVDWQSI 331
GH + + + F S + DS +W + R + TF+GH G + +
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 332 NLITGGGDSSCRLWDLETGKNI 397
TG D +CRL+D+ TG +
Sbjct: 262 RFGTGSDDGTCRLYDIRTGHQL 283
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/78 (21%), Positives = 34/78 (43%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
LQGH + + + E + + SA++D + VW +L ++ +
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 332 NLITGGGDSSCRLWDLET 385
++ GG DS C ++ L +
Sbjct: 121 SVACGGLDSVCSIFSLSS 138
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 275 TFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNFSYSA 451
T GH G ++ LD + +++ D +W+ T + +K + V TC FS +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 452 YQAA 463
A
Sbjct: 120 QSVA 123
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 284 GHGGVIWCLD-VDWQSINLITGGGDSSCRLWDLETG 388
GH G + C V + +LIT GD +C LWD+ TG
Sbjct: 92 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 127
Score = 35.9 bits (79), Expect = 0.036
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDVDWQSI 331
GH + + + F S + DS +W + R + TF+GH G + +
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 199
Query: 332 NLITGGGDSSCRLWDLETGKNI 397
TG D +CRL+D+ TG +
Sbjct: 200 RFGTGSDDGTCRLYDIRTGHQL 221
Score = 33.5 bits (73), Expect = 0.19
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSA-AKDSKPNVWWSLNGE---RLGTF-NGHGGVIWCLDVDW 322
G +T I ++ G LLF+ A ++ VW +L GE LG + H I CL +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA 289
Query: 323 QSINLITGGGDSSCRLW 373
L TG DS+ ++W
Sbjct: 290 DGSALCTGSWDSNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 284 GHGGVIWCLD-VDWQSINLITGGGDSSCRLWDLETG 388
GH G + C V + +LIT GD +C LWD+ TG
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 35.9 bits (79), Expect = 0.036
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGER-LGTFNGHGGVIWCLDVDWQSI 331
GH + + + F S + DS +W + R + TF+GH G + +
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Query: 332 NLITGGGDSSCRLWDLETGKNI 397
TG D +CRL+D+ TG +
Sbjct: 262 RFGTGSDDGTCRLYDIRTGHQL 283
Score = 33.5 bits (73), Expect = 0.19
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSA-AKDSKPNVWWSLNGE---RLGTF-NGHGGVIWCLDVDW 322
G +T I ++ G LLF+ A ++ VW +L GE LG + H I CL +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSA 351
Query: 323 QSINLITGGGDSSCRLW 373
L TG DS+ ++W
Sbjct: 352 DGSALCTGSWDSNLKIW 368
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/78 (21%), Positives = 34/78 (43%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
LQGH + + + E + + SA++D + VW +L ++ +
Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQ 120
Query: 332 NLITGGGDSSCRLWDLET 385
++ GG DS C ++ L +
Sbjct: 121 SVACGGLDSVCSIFSLSS 138
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 275 TFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNFSYSA 451
T GH G ++ LD + +++ D +W+ T + +K + V TC FS +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 452 YQAA 463
A
Sbjct: 120 QSVA 123
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 35.9 bits (79), Expect = 0.036
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSL---------NGERL--GTFNGHGGVIW 304
GH R++T + ++ + LL S ++D VW + G L FN H +
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVT 177
Query: 305 CLDVDWQSIN--LITGGGDSSCRLWDLETGK 391
+ +D+ N +I+ D +C++W L GK
Sbjct: 178 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGK 208
Score = 34.7 bits (76), Expect = 0.083
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +2
Query: 173 ITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG 352
I + N EG L +W G+ L ++GH + CL L++G
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 353 DSSCRLWDL 379
D S R+W L
Sbjct: 141 DGSIRVWSL 149
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 35.9 bits (79), Expect = 0.036
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +2
Query: 137 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLD 313
+K L G Q A+ +N EG +L + A+D V+ W L H V CL
Sbjct: 147 IKELRDVGQQLALA---FNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVK-CLT 202
Query: 314 VDWQSINLITGGGDSSCRLWDLETGKNIATL--KSNSSVRTCNFS 442
L++ GG CR+WD+ +A+L + + +C FS
Sbjct: 203 FSESGQFLVSLGGPV-CRVWDVNASAAVASLSKEKDEMFASCRFS 246
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 35.5 bits (78), Expect = 0.047
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNGER--LGTFNGHGGVI----WC 307
GH + +K++ G L S D+ ++W S N R L F H + WC
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 308 LDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 448
+Q+ L TGGG D W+ TG + ++++ S V C+ +S
Sbjct: 294 ---PFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQV--CSLLWS 337
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSK-PNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN 334
GH+ + + +N +L + D K N + +GT+ GH + L
Sbjct: 193 GHESRVGSLAWNNH--ILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKK 250
Query: 335 LITGGGDSSCRLWD 376
L +GG D+ +WD
Sbjct: 251 LASGGNDNVVHIWD 264
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 35.5 bits (78), Expect = 0.047
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVW-----WSLNGER--LGTFNGHGGVI----W 304
GH + +K++ G L S D+ ++W S N R L F H + W
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 305 CLDVDWQSINLITGG--GDSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 448
C +Q+ L TGG GD + W+ TG + ++++ S V C+ +S
Sbjct: 276 C---PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV--CSLLWS 320
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 335 LITGGGDSSCRLWDLETGKNIATLKSNSS-VRTCNF 439
+ TG DSS ++DL +G +A LK +SS VR CN+
Sbjct: 416 IYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNW 451
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 35.1 bits (77), Expect = 0.063
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 236 PNVWWSLNGERLGTFNGHGGVIWCLDVDW-QSINLITGGGDSSCRLWDLETGKNIATLKS 412
P +SL+ + + +F GH + LD+ W +S L++ D + RLWD+ET +
Sbjct: 501 PETVFSLSDKPICSFTGHLDDV--LDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFAH 558
Query: 413 NSSVRTCNFS 442
N V F+
Sbjct: 559 NDYVTCVQFN 568
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 247
+Q HQ I +K++ + LL SA +D +VW
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVW 438
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 35.1 bits (77), Expect = 0.063
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +2
Query: 170 AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGG 349
++ + +G LL ++ + S +G+ + + GH + + L TG
Sbjct: 250 SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGN 309
Query: 350 GDSSCRLWDLET-GKNIATLKSN-SSVRTCNFS 442
D++CRLWD+ ++ A LK N ++R F+
Sbjct: 310 QDTACRLWDIRNPSESFAVLKGNMGAIRGLKFT 342
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 34.7 bits (76), Expect = 0.083
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG---TFNGHGGVIWCLDVD 319
+L H+ + ++++ G L +A+ D +W L+ ++ T H + +
Sbjct: 219 ILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWS 278
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATLKSNSS 421
L+T G +LWD++TG T +N++
Sbjct: 279 PDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNT 312
Score = 32.3 bits (70), Expect = 0.44
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +2
Query: 140 KPLMLQGHQRAITQIKY---NREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 310
+PL GH+++ I+ + + S ++DS+ +W N + L +GH + C
Sbjct: 432 QPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNC- 490
Query: 311 DVDWQSIN---LITGGGDSSCRLW 373
V W N L + D + R+W
Sbjct: 491 -VSWNPKNPRMLASASDDQTIRIW 513
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVW-WSLNGER-----LGTFNGHGGVI----WC 307
GH + +K++ G+ S D+ ++W SL + L F H + WC
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 308 LDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 448
+Q+ L TGGG D + W+ TG + ++++ S V + +S S
Sbjct: 310 ---PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQS 355
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER----LGTF----NGHGGVIW 304
+L GH + + ++ D+LFS + D+ +W S + + + T NGH +W
Sbjct: 134 VLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVW 193
Query: 305 CLDVDWQSINLITGGGDSSCRLWDLETGK 391
+ + ++T D + ++W + +
Sbjct: 194 SISFNAAGDKMVTCSDDLAVKIWKTDISR 222
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGD-LLFSAAKDSKPNVW--------WSLN-GERLGTFNGHGGVI 301
L+GH + + +N D ++ S + D +W W+ G RLG+F+G+ V
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDGNTCVW 75
Query: 302 WCLDVDWQSINLITG-GGDSSCRLWDLETGKNIATLKSNSSV 424
D +S++++ G + W+ +G +AT + SV
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWN-ASGSLLATCGRDKSV 116
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH+ + +K++ + L S D++ VW + + + ++ H + +
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 332 NLITGGG---DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 448
L+ GG D R W+ T +++++ + S V CN ++S
Sbjct: 391 GLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQV--CNLAWS 430
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 242 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 379
VW ++ T GH + L V ++TG GD + R W++
Sbjct: 449 VWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 260 GERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLET-GKNIATLKSN-SSVRTC 433
G+ L T +GH + TG D +CR+WD+ K++A L+ N ++R+
Sbjct: 307 GKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSI 366
Query: 434 NFS 442
++
Sbjct: 367 RYT 369
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 287 HGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKN 394
H G + L + L++ G DS RLWD+E+G+N
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRN 346
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 735 VDGTMFITASKDHTAKLFDTNSLXLLKEYR 824
+D +FIT S DH K++DTN+ + +++
Sbjct: 114 IDTGLFITGSFDHYLKVWDTNTAQAVVDFK 143
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 215 SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN---LITGGGDSSCRLWDLE 382
S ++DS+ +W G+ + GH G + C V W N L + D + R+W L+
Sbjct: 506 SGSEDSQVYIWHRSTGKLIVELPGHAGAVNC--VSWSPTNLHMLASASDDGTIRIWGLD 562
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 33.9 bits (74), Expect = 0.14
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNG-HGGVIWCLDVDWQS 328
L+GH IT + YN + + L S + V +G R +G V+ LD S
Sbjct: 131 LKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSS 190
Query: 329 INL-ITGGGDSSCRLWDLETGKN--IATLKSNSS 421
+L +T G D + LWD TG++ ++ LK +S+
Sbjct: 191 RHLLVTAGDDGTVHLWD-TTGRSPKMSWLKQHSA 223
Score = 33.1 bits (72), Expect = 0.25
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Frame = +2
Query: 170 AITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF-----NGHGGVIWCLD-VDWQ-- 325
A+ +K+N ++ S +D K ++W NG+ LGT +G CL + +
Sbjct: 45 AVNSVKWNHTNLVVASTGEDKKISLWRK-NGQSLGTVPVTGKDGGDSAEECLSAISFSKK 103
Query: 326 -SINLITGGGDSSCRLWDLETGKNIATLKSNSSVRT 430
S + +GG ++WDL+ I LK ++S T
Sbjct: 104 GSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTIT 139
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 242 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS-SCRLWDLETGKNIATLKSNS 418
VW + + H +W +D L+ G D S +LW + G +I T+K+ +
Sbjct: 560 VWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA 619
Query: 419 SVRTCNF 439
++ F
Sbjct: 620 NICCVQF 626
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 242 VWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS-SCRLWDLETGKNIATLKSNS 418
VW + + H +W +D L+ G D S +LW + G +I T+K+ +
Sbjct: 560 VWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA 619
Query: 419 SVRTCNF 439
++ F
Sbjct: 620 NICCVQF 626
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE---RLGTFNGHGGVIWCLDVDWQS 328
G AI Q++Y+ G + +A+KD ++ ++ + +G +G V + Q
Sbjct: 172 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 231
Query: 329 INLITGGGDSSCRLWDLETGKNI 397
+++ G DS+ +LW++ +G+ +
Sbjct: 232 F-VLSSGKDSTVKLWEIGSGRMV 253
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE---RLGTFNGHGGVIWCLDVDWQS 328
G AI Q++Y+ G + +A+KD ++ ++ + +G +G V + Q
Sbjct: 264 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 323
Query: 329 INLITGGGDSSCRLWDLETGKNI 397
+++ G DS+ +LW++ +G+ +
Sbjct: 324 F-VLSSGKDSTVKLWEIGSGRMV 345
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 161 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTF-NGHGGVIWCLDVDWQSINL 337
H A++ + +R+G LL+S + D +W + + + L +F N H I + + ++ ++
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALS-ENGDI 222
Query: 338 ITGGGDSSCRLW 373
TG D ++W
Sbjct: 223 YTGSSDQRIKVW 234
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 278 FNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGK 391
+ GH G + + D + +G D S R+W++ETG+
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 33.5 bits (73), Expect = 0.19
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWW----SLNG-ERLGTFN-GHGGVIWC 307
L+L + IT ++++ +G + SA +D K V L G + +F GH I C
Sbjct: 149 LLLSHYCSIITSLEFSPDGRYILSADRDFKIRVTVFPKKPLEGAHEIQSFCLGHSEFITC 208
Query: 308 LD-VDWQSIN---LITGGGDSSCRLWDLETGKNIAT 403
V + L++G GDS+ RLWD+ +G + T
Sbjct: 209 TAFVSTPELTQGYLMSGSGDSTVRLWDITSGSLLDT 244
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 33.1 bits (72), Expect = 0.25
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Frame = +2
Query: 134 NMKPL-MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE-----RL--GTFNGH 289
NM+ L +L G + +T ++++++G+ L++ + + W + +L T N +
Sbjct: 244 NMELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKSVEIVYKLYRATENTN 303
Query: 290 GGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAY 454
V + D++ +L TGG D ++DL+TG ++ ++ S FS+ Y
Sbjct: 304 QRVFF--DIEPCGRHLGTGGQDGLVHMYDLQTGNWVSGYQAASDTVNA-FSFHPY 355
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 236 PNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGG-DSSCRLWDLETGKNIATLKS 412
P +S + + + + GH I LD+ W L+ D + RLWD+ET +
Sbjct: 488 PETVFSFSDKPVCSLKGHLDAI--LDLSWSKSQLLLSSSMDKTVRLWDIETKTCLKLFAH 545
Query: 413 NSSVRTCNFS 442
N V FS
Sbjct: 546 NDYVTCIQFS 555
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +2
Query: 200 GDLLFSAAKDSKPNVWW-SLNGE--RLGTFNGHGGVIWCLDVDWQSIN----LITGGGDS 358
G+++ S + D +W + G + G +GH G + CL ++ L +GG D
Sbjct: 328 GEMVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDK 387
Query: 359 SCRLWDLETGKNIATLKSN 415
S R+W + N+ KS+
Sbjct: 388 SLRVWWVPKQDNLEEKKSS 406
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 260 GERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLET-GKNIATLKSN-SSVRTC 433
G+ L T +GH + + TG D +CR+WD+ +++ LK N ++R+
Sbjct: 309 GKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSI 368
Query: 434 NFS 442
++
Sbjct: 369 RYT 371
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 236 PNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 373
P++ L +++ + +GH G +W ++ D + L + G D +LW
Sbjct: 262 PDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWS-LNGE 265
L GHQ + Q++++ G L S D +W S LNGE
Sbjct: 276 LSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGE 314
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 161 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLI 340
H AI I + + L +A+ D VW + G GH G + + + +L+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 341 TGGGDSSC-RLWDL 379
G C LWDL
Sbjct: 187 VSGSRDGCFALWDL 200
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 32.3 bits (70), Expect = 0.44
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 3/121 (2%)
Frame = +2
Query: 26 GNSLRFASCQKVRRLPHVTTSFLL*FIINY*IKYFLNMKPLMLQGHQRAITQIKYNREGD 205
G+S R SC P + F++N+ K L + H + +++ +G
Sbjct: 142 GHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKFK-LSSREHSNFVNCVRFAPDGS 200
Query: 206 LLFSAAKDSKPNVWWSLNGERLGTFN---GHGGVIWCLDVDWQSINLITGGGDSSCRLWD 376
+ + D K ++ E LG + GH G I+ + ++T D S ++WD
Sbjct: 201 KFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
Query: 377 L 379
+
Sbjct: 261 I 261
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 149 MLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGE-RLGTFNGHGGVIWCLDVDWQ 325
+L+ H+ AI+ I+Y+ + + SA + + VW ++ E +L H I CL
Sbjct: 486 VLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPN 545
Query: 326 SINLITGGGDSSCRLWDLE 382
S + TG D+ +++++
Sbjct: 546 STMVATGSLDTCVIVYEVD 564
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/86 (22%), Positives = 38/86 (44%)
Frame = +2
Query: 164 QRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLIT 343
Q AI I ++ +G L + +D ++ + + + G + C L+T
Sbjct: 303 QGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLT 362
Query: 344 GGGDSSCRLWDLETGKNIATLKSNSS 421
GG D ++W +E K +A + ++S
Sbjct: 363 GGEDDLVQVWSMEDRKVVAWGEGHNS 388
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 287 HGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKN 394
H GV+ L + L++ G S RLWD+E+G+N
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRN 346
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 735 VDGTMFITASKDHTAKLFDTNSLXLLKEYR 824
+D MFIT S DH K++DTN+ ++ +++
Sbjct: 114 IDTGMFITGSFDHYVKVWDTNTSQVVVDFK 143
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 31.9 bits (69), Expect = 0.58
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL--DVDWQ 325
L GH++ ++ I D L++ +KD VW +G+ G GG I C+ + W
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLK-LGGEIGCVLSEGPWL 205
Query: 326 SINLITGGGDSSCRLWDLET 385
+ G + + W++ET
Sbjct: 206 LV-----GMPNLVKAWNIET 220
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 269 LGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSV 424
L +GH ++ + + S L TG D + R+WD +G+ LK +
Sbjct: 144 LTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEI 195
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 31.9 bits (69), Expect = 0.58
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNG--ERLGTFNGHGGVI----W 304
+GH + + +K++ G L S D+ ++W S N + L H + W
Sbjct: 263 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 322
Query: 305 CLDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 448
C +Q+ L TGGG D + + W+ TG + ++ + S V C+ +S
Sbjct: 323 C---PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV--CSLLWS 367
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 31.9 bits (69), Expect = 0.58
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLFSAAKDSKPNVW----WSLNG--ERLGTFNGHGGVI----W 304
+GH + + +K++ G L S D+ ++W S N + L H + W
Sbjct: 253 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 312
Query: 305 CLDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 448
C +Q+ L TGGG D + + W+ TG + ++ + S V C+ +S
Sbjct: 313 C---PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQV--CSLLWS 357
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 164 QRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLIT 343
Q +I I ++ +G L + +D ++ L + + + G + C ++T
Sbjct: 303 QGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILT 362
Query: 344 GGGDSSCRLWDLETGKNIATLKSNSS 421
GG D ++W +E K +A + ++S
Sbjct: 363 GGEDDLVQVWSMEDRKVVAWGEGHNS 388
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +2
Query: 155 QGHQRAITQIKYNREG----DLLFSAAKDSKPNVWWSLNGERLGTFN-GHGGVIWCLDVD 319
+GH + QI ++ + +L S + D W + + +++ + G+ I+
Sbjct: 80 KGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYG 139
Query: 320 WQSINLITGGGDSSCRLWDLETGKNIATLKSN 415
+ NL+ GG LWD K +A L+ +
Sbjct: 140 GAADNLLAGGCKEQVLLWDWRNSKQVACLEES 171
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERL----GTFNGHGGVIWCLDVD 319
L+ H+ A+ + N +G +LFS + D VW + G GH I L +
Sbjct: 276 LEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAI--LSLF 333
Query: 320 WQSINLITGGGDSSCRLW 373
S L++G D + R+W
Sbjct: 334 NVSDLLLSGSADRTVRIW 351
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG 274
+Q H+ +I IK++ +G L SA +D +W + ER G
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKG 399
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 290 GGVIWCLDVDWQSINLITGGG-DSSCRLWDLETGKNIATLK 409
G ++ L +W++ N++ G D ++WD+ TGK T++
Sbjct: 214 GQTLFFLTFNWENRNIVASGSEDKKVKVWDVATGKCKVTME 254
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 209 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDL 379
+FSA+ D +W + + F GH G + L L++ G D + RLW++
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +2
Query: 167 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITG 346
R+ + I +G+++ D+ + S + L T GH + CL + + L+TG
Sbjct: 2627 RSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTG 2686
Query: 347 GGDSSCRLWDLETGKNIATLKSNSS 421
DS+ LW + T S S
Sbjct: 2687 SRDSTVLLWRIHKAFTSRTSVSEPS 2711
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 335 LITGGGDSSCRLWDLET-GKNIATLKSN-SSVRTCNFS 442
L TG D++CRLWD+ +++ LK N ++R F+
Sbjct: 334 LATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFT 371
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER 268
+Q H+ AI +K++ +G L SA +D VW + ER
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGER 268
+Q H+ AI +K++ +G L SA +D VW + ER
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDER 285
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 293 GVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNS-SVRTCNFSYSAY 454
GVI C+ + + L G D C +WD ET ++ N S + S+S Y
Sbjct: 24 GVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKY 78
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Frame = +2
Query: 182 IKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSIN--LITGGGD 355
+ +N G LL + D +W + V W L+ D
Sbjct: 29 VAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSAAD 88
Query: 356 SSCRLWDLETGKNIA 400
S LWD+ TG+ IA
Sbjct: 89 KSLTLWDVSTGEKIA 103
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLG 274
+Q H +I IK++ +G L SA +D ++W + E+ G
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKG 449
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Frame = +2
Query: 158 GHQRAITQIKYNREGDLLFSAAKDSKPNVW--WSLNGER-----LGTFNGHGGVI----W 304
GH + +K++ G L S + ++W S+ + L F H + W
Sbjct: 247 GHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAW 306
Query: 305 CLDVDWQSINLITGGG--DSSCRLWDLETGKNIATLKSNSSVRTCNFSYS 448
C +Q+ L TGGG D + W+ TG + ++++ S V C+ +S
Sbjct: 307 C---PFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQV--CSLLWS 351
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 161 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDW-QSINL 337
H + + + +G +FS D + +W L+G + T H G I + W +NL
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAM--AWIPGMNL 128
Query: 338 I-TGGGDSSCRLWD 376
+ TG D + + WD
Sbjct: 129 LATGSWDKTLKYWD 142
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 254 LNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 433
++G+RL N + L QS NL+ DS RL+D+E+ L S +++ C
Sbjct: 1 MSGDRLEFENPIEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDC 60
Query: 434 NF 439
F
Sbjct: 61 CF 62
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 254 LNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 433
++G+RL N + L QS NL+ DS RL+D+E+ L S +++ C
Sbjct: 1 MSGDRLEFENPIEDAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDC 60
Query: 434 NF 439
F
Sbjct: 61 CF 62
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 281 NGHGGVIWCLDVDWQSINLITGGGDSSCRLW 373
NGH G IW L L TGG D ++W
Sbjct: 195 NGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 257 NGERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRT 430
N E + + GH +W D + NL+ TG D WD+ + NS V T
Sbjct: 152 NLETVQEWKGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHT 210
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +2
Query: 254 LNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 433
L+ + G + G W D +N + G+SS + WDL T K + +++ ++ VR
Sbjct: 160 LSKDSAGMLHSLSGGAW----DPHDVNAVAATGESSVQFWDLRTMKKVNSIE-HAHVRGV 214
Query: 434 NFSYSAYQAAYTTDKAMG 487
+++ T + G
Sbjct: 215 DYNPKREHILVTAEDESG 232
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 658 WDLRTGKKIHSVKEHTH 708
WDLRT KK++S+ EH H
Sbjct: 195 WDLRTMKKVNSI-EHAH 210
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 182 IKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGV-IWCLDVDW--QSINLITGGG 352
+K++ +G L+ D +V S G L TF+ LD + + + +++G G
Sbjct: 211 VKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSG 270
Query: 353 DSSCRLWDLETGKNI 397
D S W + +GK +
Sbjct: 271 DGSTHAWGVRSGKQV 285
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 182 IKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGV-IWCLDVDW--QSINLITGGG 352
+K++ +G L+ D +V S G L TF+ LD + + + +++G G
Sbjct: 208 VKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSG 267
Query: 353 DSSCRLWDLETGKNI 397
D S W + +GK +
Sbjct: 268 DGSTHAWGVRSGKQV 282
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 161 HQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL- 337
H + +K++++G L S D ++ G +F V+ + + N+
Sbjct: 204 HNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFK-EDEVVGVVKFHPDNCNVF 262
Query: 338 ITGGGDSSCRLWDLETGK 391
++GG S RLWD+ K
Sbjct: 263 LSGGSKGSLRLWDIRANK 280
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 314 VDWQSINLITGGGDSSCRLWDLETGKN 394
+ W+ +ITGG DS LWD G++
Sbjct: 157 IPWRPWEVITGGLDSKLVLWDFSKGRS 183
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 351 PPPVMRLIDCQSTSRHHITPPWPLKVPRRSPFS 253
PPP ++ Q RHH PP P P RSP S
Sbjct: 118 PPPPSTAVEYQPHHRHHPPPP-PPPPPPRSPNS 149
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +1
Query: 613 MRQLSLVIEAGD---LIQWDLRTGKKIHSVKEHTHQI 714
M+ ++ AGD L+ WDLRT + H VK H +I
Sbjct: 228 MKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREI 264
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +2
Query: 146 LMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVW 247
+ L+GH+ A+T + ++ + + +A+KD VW
Sbjct: 283 MQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVW 316
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 332 NLITGGGDSSCRLWDLETGKNIATLKSNSSV 424
++ TG GD++ + W L+ G + T+ + SV
Sbjct: 599 HVYTGSGDNTIKAWSLQDGSLLCTMSGHKSV 629
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 182 IKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS 358
+ +N++G +L + A+D V+ W L H V L +S + G
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHASVK-SLTFS-ESGKFLVSLGAP 205
Query: 359 SCRLWDLETGKNIATL--KSNSSVRTCNFS 442
CR+WD+ IA+L + + +C FS
Sbjct: 206 LCRVWDVNASAAIASLSKEKDEMFASCRFS 235
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 182 IKYNREGDLLFSAAKDSKPNVW-WSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDS 358
+ +N++G +L + A+D V+ W L H V L +S + G
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHASVK-SLTFS-ESGKFLVSLGAP 205
Query: 359 SCRLWDLETGKNIATL--KSNSSVRTCNFS 442
CR+WD+ IA+L + + +C FS
Sbjct: 206 LCRVWDVNASAAIASLSKEKDEMFASCRFS 235
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 335 LITGGGDSSCRLWDLETGKNIATLK 409
+ T G DS R+WD+E G +IA K
Sbjct: 177 VFTSGYDSIVRMWDMEEGLSIAASK 201
Score = 27.9 bits (59), Expect = 9.5
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSI 331
L GH A+ + L+F++ DS +W G + G I L D +
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAADTKL- 216
Query: 332 NLITGGGDSSCRLW-DLETGKNIATLKSNSSVRT 430
L+ GG D W L+ +N+ L +T
Sbjct: 217 -LVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKT 249
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 260 GERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRT 430
GE + + GH + V W ++I + D S R WD+ETGK+ L ++ T
Sbjct: 262 GEAVTSLVGHTQCV--SSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNT 317
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 260 GERLGTFNGHGGVIWCLDVDWQSINLI-TGGGDSSCRLWDLETGKNIATLKSNSSVRT 430
GE + + GH + V W ++I + D S R WD+ETGK+ L ++ T
Sbjct: 262 GEAVTSLVGHTQCV--SSVVWPEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNT 317
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 161 HQRAITQIKYNREGDL-LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINL 337
H I+ K+++ L SA+ D K +W L + H + D W+ ++
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESV 415
Query: 338 ITGGGDSSCRL 370
++GG DS+ R+
Sbjct: 416 VSGGADSNLRI 426
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +2
Query: 170 AITQIKYNREGDLLFSAAKDSKPNVWWSLNG-ERLGTFNGHGGVIWCLDVDWQSINLITG 346
A+T I ++ L++ + D N W N + G GH + CL + +G
Sbjct: 302 AVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLCLVAAGNL--MFSG 359
Query: 347 GGDSSCRLW 373
D R+W
Sbjct: 360 SADLGIRVW 368
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 269 LGTFNGHGGVIWCLDVD-WQSINLITGGGDSSCRLWDLETGKNIATLKSN 415
LG + G + W D + L++G D+ +W+L G+NI TLK +
Sbjct: 63 LGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 209 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 373
L S + D+ VW +NGE + T GH + + +D + I ++ D + + W
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDI--VSSSVDQTLKRW 138
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 269 LGTFNGHGGVIWCLDVD-WQSINLITGGGDSSCRLWDLETGKNIATLKSN 415
LG + G + W D + L++G D+ +W+L G+NI TLK +
Sbjct: 63 LGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 209 LFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 373
L S + D+ VW +NGE + T GH + + +D + I ++ D + + W
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNEDI--VSSSVDQTLKRW 138
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNG 262
L+GHQ+ +T + ++ ++L S+ DS+ V WS++G
Sbjct: 925 LKGHQKRVTGLAFSNVLNVLVSSGADSQLCV-WSMDG 960
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +2
Query: 152 LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNG 262
L+GHQ+ +T + ++ ++L S+ DS+ V WS++G
Sbjct: 925 LKGHQKRVTGLAFSNVLNVLVSSGADSQLCV-WSMDG 960
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 637 EAGDLIQWDLRTGKKIHSVKEHTHQI 714
E G L+ WD RT + H VK H ++
Sbjct: 238 EDGRLVIWDTRTNQMQHQVKVHEREV 263
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +2
Query: 155 QGHQRAITQIKYNREGDLLF-SAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVD-WQS 328
+GH+ AI + ++ + + LF SA +D + +W + + H + L + +
Sbjct: 214 EGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNE 273
Query: 329 INLITGGGDSSCRLWDL 379
L T DS+ L+DL
Sbjct: 274 WVLATASSDSTVALFDL 290
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Frame = +2
Query: 200 GDLLFSAAKDSKPNVWWSLNGER--LGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLW 373
G LLFS A D K VW + GH G + CL V S GGD L+
Sbjct: 276 GKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLY 335
Query: 374 DLETGKNI 397
K++
Sbjct: 336 SGSLDKSV 343
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +2
Query: 308 LDVDWQSIN--LITGGGDSSCRLWDLETG 388
LD+ W + LI+G D+SC +WD+ G
Sbjct: 57 LDLQWSPDDAYLISGSVDNSCIIWDVNKG 85
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 134 NMKPLM-LQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCL 310
N K +M L+GH + + ++ + +L S + D+ ++W G GH ++
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLV--K 164
Query: 311 DVDWQSIN--LITGGGDSSCRLW 373
V W I + + D + +W
Sbjct: 165 GVTWDPIGSFIASQSDDKTVIIW 187
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +2
Query: 167 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITG 346
R+ ++ +G L S D + G+ L GH W + + ++
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS 163
Query: 347 GG-DSSCRLWDLETGKNIAT 403
G D RLW+ +TG+ I T
Sbjct: 164 GSLDHEVRLWNAKTGECIRT 183
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +2
Query: 167 RAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITG 346
R+ ++ +G L S D + G+ L GH W + + ++
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS 163
Query: 347 GG-DSSCRLWDLETGKNIAT 403
G D RLW+ +TG+ I T
Sbjct: 164 GSLDHEVRLWNAKTGECIRT 183
>At5g26340.1 68418.m03148 hexose transporter, putative strong
similarity to hexose transporter, Lycopersicon
esculentum, GI:5734440; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 526
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -1
Query: 535 VSSIVLVSITNTSTRVSHSFVSGISSLICT-IAEVACSYRRVGF 407
++ I+ V +T+TST +S F + +ICT +A A S+ +G+
Sbjct: 366 IAIILGVKVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGW 409
>At5g23070.1 68418.m02697 thymidine kinase, putative similar to
thymidine kinase [Oryza sativa] SWISS-PROT:O81263
Length = 282
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 368 LWDLETGKNIATLKSNSSVRTCNFS 442
L + ETGK IA +KSN R C S
Sbjct: 99 LAERETGKRIAIIKSNKDTRYCTES 123
>At5g19280.1 68418.m02298 kinase associated protein phosphatase
(KAPP) identical to Kinase associated protein
phosphatase (SP:P46014) [Arabidopsis thaliana]; contains
Pfam PF00481: Protein phosphatase 2C domain; contains
Pfam PF00498: FHA domain
Length = 581
Score = 27.9 bits (59), Expect = 9.5
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +3
Query: 474 TKLWDTLVEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGH*SW*PY 653
+KL L V D D VSG+ + W T K + GSL+ T++ H P
Sbjct: 204 SKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHP- 262
Query: 654 TMGSEDW*KNPL 689
+GS W NP+
Sbjct: 263 DLGSRKW-GNPV 273
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/73 (24%), Positives = 38/73 (52%)
Frame = +2
Query: 272 GTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSA 451
G N H + + +D + I ++GG D R+W +++G+ ++ K ++SV + +SA
Sbjct: 384 GHVNSHTPIEFGIDPSERFI--LSGGDDCYTRIWSIKSGQLMSENKFSNSVPSV-VCWSA 440
Query: 452 YQAAYTTDKAMGH 490
+ ++GH
Sbjct: 441 DERQRDRKDSIGH 453
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +2
Query: 335 LITGGGDSSCRLWDLETGKNIATLKSNSSVRTC 433
+++G GD + W++E +A ++N V +C
Sbjct: 259 VLSGSGDGTLHAWNIENPSEVARWENNIGVVSC 291
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 293 GVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSN 415
G I+ + VD S ++T G D ++D+E+GK + + K +
Sbjct: 527 GTIYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQD 567
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,702,076
Number of Sequences: 28952
Number of extensions: 435104
Number of successful extensions: 1741
Number of sequences better than 10.0: 159
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1674
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2081245872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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