Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K08
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.77 
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    25   1.0  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    25   1.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   4.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.4  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   7.2  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   7.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   7.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.5  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 134 LKCKFYHLLMTFKSFF*VDHLLKVHVIKCNQI 39
           LK KFY  + T  S   V+H+L + V  C+QI
Sbjct: 308 LKRKFYLTICTIMSAAAVEHILSI-VNTCSQI 338


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -3

Query: 68  KVHVIKCNQILRIPYS 21
           + H+++ N IL++PYS
Sbjct: 110 RFHLVRANDILKLPYS 125


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -3

Query: 68  KVHVIKCNQILRIPYS 21
           + H+++ N IL++PYS
Sbjct: 101 RFHLVRANDILKLPYS 116


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 166 LGCLICFHPCVYHFC 210
           +GCLI F+  V+ FC
Sbjct: 259 IGCLIQFNTIVFSFC 273



 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 166 LGCLICFHPCVYHFC 210
           +GCLI F+  V+ FC
Sbjct: 540 IGCLIQFNTIVFAFC 554


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
 Frame = +3

Query: 396 LIQDDPKMVTISLIG--GIQAPDYGNIICKVDVEFSNGEENMTISQVTNGISEIVQQYSG 569
           L++ +P++ +    G  G+ A    N++C  +   +      +++ +TN +       SG
Sbjct: 27  LVKSEPQLHSPCATGSNGLPAGAGSNLLCASNGLVTTLASGSSLNGLTNNVPSNGLSSSG 86

Query: 570 TEVLNGSDVKIQFRARKDDML 632
                G  +    R R DD L
Sbjct: 87  PFSSIGGGISASKRQRTDDWL 107


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 178 ICFHPCVYHFCCA 216
           + F  C+YHF CA
Sbjct: 160 LLFLLCIYHFFCA 172


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 695 CKIHVIWWRFEKNH 736
           CKI + W+ F+  H
Sbjct: 128 CKIDITWFPFDDQH 141


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 139 HNYRLLLK*LGCLICFHPC 195
           H+ RLLL  + CL+   PC
Sbjct: 48  HSKRLLLNYINCLLEKGPC 66


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 626 YVAFIFKFFIFYR*NTIKFKYQ 691
           Y  F++ F I+   +TIK KY+
Sbjct: 137 YSQFLYGFMIYLILDTIKSKYR 158


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 420 PFLGHPVSNLV 388
           PF GHPV ++V
Sbjct: 533 PFAGHPVDSVV 543


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,229
Number of Sequences: 336
Number of extensions: 4564
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)