Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_K08
         (862 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0761 - 5874953-5876803                                           31   1.6  
03_02_0132 - 5808606-5808696,5808804-5808875,5809133-5809204,580...    30   2.1  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   2.7  
02_05_0874 - 32377906-32378131,32378269-32378384,32378516-323789...    29   3.6  
01_01_0428 + 3250204-3251724                                           29   6.3  
04_04_0774 + 27986999-27987278,27987380-27987496,27987605-279877...    28   8.3  

>01_01_0761 - 5874953-5876803
          Length = 616

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/72 (25%), Positives = 27/72 (37%)
 Frame = +3

Query: 426 ISLIGGIQAPDYGNIICKVDVEFSNGEENMTISQVTNGISEIVQQYSGTEVLNGSDVKIQ 605
           IS  G +Q   YG I       FS    N         +++    YSG  V + + V   
Sbjct: 415 ISAAGWVQTSSYGKITATWTQRFSFVNTNQVREDTEQTVNQTTDAYSGVHVTDHAGVAYS 474

Query: 606 FRARKDDMLHLY 641
             A +   L++Y
Sbjct: 475 QEAEQSFPLYIY 486


>03_02_0132 -
           5808606-5808696,5808804-5808875,5809133-5809204,
           5809299-5809379,5809475-5809618,5809708-5809779,
           5810027-5810140,5810684-5810755,5811462-5811609,
           5812120-5812231
          Length = 325

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 627 MLHLYSSFSSFIGEIPLNL-NINNAKYM 707
           + HLY SF++F GEIP+ L N+   +Y+
Sbjct: 170 LTHLYLSFNNFKGEIPVELANLPELRYL 197


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +3

Query: 438  GGIQAPDYG-NIICKVDVEFSNGEENMTISQVTNG--ISEIVQQYSGTEVLNGSDVKIQF 608
            G   +  YG +I+   DV  S  +++ +   +TNG   S  V++     +LN   + I  
Sbjct: 908  GPCPSSSYGQSILNSHDVSLSLPQKDSSCIAITNGPSSSNYVEEVPMETILNQPTLSIPL 967

Query: 609  RARKDDMLH 635
             A KD++LH
Sbjct: 968  EACKDELLH 976


>02_05_0874 -
           32377906-32378131,32378269-32378384,32378516-32378921,
           32379023-32379139,32379229-32379291,32380183-32380373
          Length = 372

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = -3

Query: 443 SSYQRNCHHFWVILYQTLYSKAVSSTESLW*QKHV 339
           +S +R   HF +++Y+ L++ AV +  +LW ++ V
Sbjct: 32  ASLKRGMSHFVLVVYRNLFATAVMAPFALWFERRV 66


>01_01_0428 + 3250204-3251724
          Length = 506

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 615 RKDDMLHLYSSFSSFIGEIPLNL 683
           R  DM+HL  S S+F G+IP+ L
Sbjct: 127 RLTDMIHLNFSHSNFYGQIPIGL 149


>04_04_0774 +
           27986999-27987278,27987380-27987496,27987605-27987759,
           27987855-27987929,27988025-27988321,27988448-27988780,
           27988880-27988996
          Length = 457

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 296 SRLCCTEFTCHHRQEHVFATKGSQWRRQLYC 388
           + L  T F   HR E + A K S WRR++ C
Sbjct: 129 TNLYATVFGGCHRLEPLLAEKRSMWRREMDC 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,534,063
Number of Sequences: 37544
Number of extensions: 377268
Number of successful extensions: 741
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)