Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K08
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical pr... 29 4.3
L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription f... 29 4.3
AL031627-16|CAA20968.1| 262|Caenorhabditis elegans Hypothetical... 29 4.3
AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical ... 29 4.3
AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 28 9.8
AL132862-21|CAB70232.1| 476|Caenorhabditis elegans Hypothetical... 28 9.8
AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b prot... 28 9.8
>Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 225 VIRAKPLDNEMLHTNELQNQDINTADSVALNLPVITDK 338
V+ A P D +L N +Q N DS + N+ +TD+
Sbjct: 300 VVPADPFDPSLLSWNPMQGMGDNAHDSSSFNISSLTDQ 337
>Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 225 VIRAKPLDNEMLHTNELQNQDINTADSVALNLPVITDK 338
V+ A P D +L N +Q N DS + N+ +TD+
Sbjct: 304 VVPADPFDPSLLSWNPMQGMGDNAHDSSSFNISSLTDQ 341
>Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 225 VIRAKPLDNEMLHTNELQNQDINTADSVALNLPVITDK 338
V+ A P D +L N +Q N DS + N+ +TD+
Sbjct: 300 VVPADPFDPSLLSWNPMQGMGDNAHDSSSFNISSLTDQ 337
>Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 225 VIRAKPLDNEMLHTNELQNQDINTADSVALNLPVITDK 338
V+ A P D +L N +Q N DS + N+ +TD+
Sbjct: 304 VVPADPFDPSLLSWNPMQGMGDNAHDSSSFNISSLTDQ 341
>L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription
factor protein.
Length = 459
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 225 VIRAKPLDNEMLHTNELQNQDINTADSVALNLPVITDK 338
V+ A P D +L N +Q N DS + N+ +TD+
Sbjct: 304 VVPADPFDPSLLSWNPMQGMGDNAHDSSSFNISSLTDQ 341
>AL031627-16|CAA20968.1| 262|Caenorhabditis elegans Hypothetical
protein Y102A5C.27 protein.
Length = 262
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 676 NGISPIKDEKLEYKCNISSFLARNCIFTSLPFKTSVPEYC 557
N I+PI D E+ + + C+ T++ K + PE C
Sbjct: 163 NAITPISDSVYEFNSIVQPADSEGCVKTTITCKKASPEAC 202
>AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 225 VIRAKPLDNEMLHTNELQNQDINTADSVALNLPVITDK 338
V+ A P D +L N +Q N DS + N+ +TD+
Sbjct: 300 VVPADPFDPSLLSWNPMQGMGDNAHDSSSFNISSLTDQ 337
>AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 225 VIRAKPLDNEMLHTNELQNQDINTADSVALNLPVITDK 338
V+ A P D +L N +Q N DS + N+ +TD+
Sbjct: 304 VVPADPFDPSLLSWNPMQGMGDNAHDSSSFNISSLTDQ 341
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 498 NGEENMTISQVTNGISEIVQQYSGTEVLNGSDVKIQ 605
NGE+ TI+Q T G S+I + + +LNG+DVKI+
Sbjct: 44 NGEDVKTIAQ-TVGTSQIDELH----ILNGTDVKIE 74
>AL132862-21|CAB70232.1| 476|Caenorhabditis elegans Hypothetical
protein Y73F8A.26 protein.
Length = 476
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 657 KMKNLNINATYHLFLLETVFSHHCHLKLQFQSTVAQ 550
K+ +N + HLF + H CH K+Q + AQ
Sbjct: 260 KLARINGHYVGHLFAAHFEYLHFCHFKMQRGAEAAQ 295
>AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b protein
2.2 protein.
Length = 339
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = -1
Query: 796 LTKNTFANIAIFKQIXNF-NSVIFFKSPPNDMYFALLIFKF---NGISPIKDEKLEYKCN 629
+T+NTF+ I N++ F S P+ + F I K N ++PI E Y N
Sbjct: 155 ITENTFSKKQILAMEQTILNALNFDLSCPSSLVFLRYISKTLTENDVNPIDKETFYYVHN 214
Query: 628 ISSFLARNCIFTSL 587
IS L + S+
Sbjct: 215 ISKCLGELALLDSV 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,539,549
Number of Sequences: 27780
Number of extensions: 395993
Number of successful extensions: 1130
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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