Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_K08
(862 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 24 1.6
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 24 2.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.4
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 8.4
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 8.4
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 8.4
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 24.2 bits (50), Expect = 1.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 615 RKDDMLHLYSSFSSFIGEIPLNLNINNAKYMSFGGDLKK 731
R D + HL+ S + + E PL N+N + + S L K
Sbjct: 228 RIDAVPHLFESANISLDEPPLGKNLNLSLHASLNHTLTK 266
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 23.8 bits (49), Expect = 2.1
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 367 LRAFGSKNMFLSVMTGKFSATESAVLMS*FCNSLVCNI-SLSNG 239
LRA + F V G SAT + + F N++ N+ S S+G
Sbjct: 57 LRAINPEYGFFGVAPGTSSATNPNAMKTIFKNTIFTNVASTSDG 100
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 695 CKIHVIWWRFEKNH 736
CKI + W+ F+ H
Sbjct: 111 CKIDIAWFPFDDQH 124
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 695 CKIHVIWWRFEKNH 736
CKI + W+ F+ H
Sbjct: 111 CKIDITWFPFDDQH 124
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 695 CKIHVIWWRFEKNH 736
CKI + W+ F+ H
Sbjct: 111 CKIDIAWFPFDDQH 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 695 CKIHVIWWRFEKNH 736
CKI + W+ F+ H
Sbjct: 111 CKIDITWFPFDDQH 124
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 695 CKIHVIWWRFEKNH 736
CKI + W+ F+ H
Sbjct: 179 CKIDITWFPFDDQH 192
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.4
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 695 CKIHVIWWRFEKNH 736
CKI + W+ F+ H
Sbjct: 179 CKIDITWFPFDDQH 192
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 573 EVLNGSDVKIQFRARKDDMLHLYSSFSS 656
E+ +G+ +++ D+LHL+ S+S+
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGSWSN 676
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 573 EVLNGSDVKIQFRARKDDMLHLYSSFSS 656
E+ +G+ +++ D+LHL+ S+S+
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGSWSN 676
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 573 EVLNGSDVKIQFRARKDDMLHLYSSFSS 656
E+ +G+ +++ D+LHL+ S+S+
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGSWSN 676
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,327
Number of Sequences: 438
Number of extensions: 4374
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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